RNA–Protein interactions for RNA: ENST00000539277.5

TMTC1-203, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMTC1, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-203ENST00000539277 CHL1O00533 1208 aa23.73■■□□□ 1.39
TMTC1-203ENST00000539277 DZIP1LQ8IYY4 767 aaKnown RBP23.73■■□□□ 1.39
TMTC1-203ENST00000539277 OFD1O75665 1012 aa23.72■■□□□ 1.39
TMTC1-203ENST00000539277 CSB-PGBD3P0DP91 1061 aa23.72■■□□□ 1.39
TMTC1-203ENST00000539277 KIAA0232Q92628 1395 aa23.71■■□□□ 1.39
TMTC1-203ENST00000539277 FGD1P98174 961 aa23.71■■□□□ 1.39
TMTC1-203ENST00000539277 CRB1P82279 1406 aa23.71■■□□□ 1.39
TMTC1-203ENST00000539277 HAP1P54257 671 aaPredicted RBP23.71■■□□□ 1.39
TMTC1-203ENST00000539277 ATF7IPQ6VMQ6 1270 aa23.71■■□□□ 1.39
TMTC1-203ENST00000539277 ITPRIPQ8IWB1 547 aa23.71■■□□□ 1.39
TMTC1-203ENST00000539277 ERBB3P21860 1342 aa23.71■■□□□ 1.39
TMTC1-203ENST00000539277 LGR6Q9HBX8 967 aa23.7■■□□□ 1.39
TMTC1-203ENST00000539277 R3HCC1Q9Y3T6 440 aaKnown RBP23.7■■□□□ 1.39
TMTC1-203ENST00000539277 ZSCAN30Q86W11 494 aa23.7■■□□□ 1.38
TMTC1-203ENST00000539277 RGPD5Q99666 1765 aa23.69■■□□□ 1.38
TMTC1-203ENST00000539277 MPRIPQ6WCQ1 1025 aa23.69■■□□□ 1.38
TMTC1-203ENST00000539277 NECTIN2Q92692 538 aa23.69■■□□□ 1.38
TMTC1-203ENST00000539277 MSNP26038 577 aaKnown RBP23.69■■□□□ 1.38
TMTC1-203ENST00000539277 ZNF530Q6P9A1 599 aaPredicted RBP23.69■■□□□ 1.38
TMTC1-203ENST00000539277 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.69■■□□□ 1.38
TMTC1-203ENST00000539277 MFAP1P55081 439 aaKnown RBP23.68■■□□□ 1.38
TMTC1-203ENST00000539277 TMEM57Q8N5G2 664 aa23.68■■□□□ 1.38
TMTC1-203ENST00000539277 ZHX1Q9UKY1 873 aaPredicted RBP23.68■■□□□ 1.38
TMTC1-203ENST00000539277 MAP3K5Q99683 1374 aa23.68■■□□□ 1.38
TMTC1-203ENST00000539277 MRPL50Q8N5N7 158 aaKnown RBP23.67■■□□□ 1.38
TMTC1-203ENST00000539277 C22orf23Q9BZE7 217 aa23.67■■□□□ 1.38
TMTC1-203ENST00000539277 PRDM10Q9NQV6 1147 aa23.67■■□□□ 1.38
TMTC1-203ENST00000539277 MVPQ14764 893 aaKnown RBP23.67■■□□□ 1.38
TMTC1-203ENST00000539277 PDZRN3Q9UPQ7 1066 aa23.66■■□□□ 1.38
TMTC1-203ENST00000539277 PCDHB15Q9Y5E8 787 aa23.66■■□□□ 1.38
TMTC1-203ENST00000539277 CCDC173Q0VFZ6 552 aa23.66■■□□□ 1.38
TMTC1-203ENST00000539277 ALDH1L2Q3SY69 923 aa23.66■■□□□ 1.38
TMTC1-203ENST00000539277 MAP7D2Q96T17 732 aa23.66■■□□□ 1.38
TMTC1-203ENST00000539277 SOS2Q07890 1332 aaPredicted RBP23.64■■□□□ 1.38
TMTC1-203ENST00000539277 KIF16BQ96L93 1317 aa23.64■■□□□ 1.38
TMTC1-203ENST00000539277 HSCBQ8IWL3 235 aa23.64■■□□□ 1.38
TMTC1-203ENST00000539277 PRDM11Q9NQV5 511 aa23.64■■□□□ 1.38
TMTC1-203ENST00000539277 NASPP49321 788 aaPredicted RBP23.63■■□□□ 1.37
TMTC1-203ENST00000539277 TNPO1Q92973 898 aaKnown RBP23.63■■□□□ 1.37
TMTC1-203ENST00000539277 IPO8O15397 1037 aaKnown RBP23.61■■□□□ 1.37
TMTC1-203ENST00000539277 PLEKHO1Q53GL0 409 aaPredicted RBP23.61■■□□□ 1.37
TMTC1-203ENST00000539277 SMAP1Q8IYB5 467 aaPredicted RBP23.61■■□□□ 1.37
TMTC1-203ENST00000539277 ANP32BQ92688 251 aaKnown RBP23.61■■□□□ 1.37
TMTC1-203ENST00000539277 PHRF1Q9P1Y6 1649 aaKnown RBP23.6■■□□□ 1.37
TMTC1-203ENST00000539277 UQCRHLA0A096LP55 91 aa23.6■■□□□ 1.37
TMTC1-203ENST00000539277 KCNQ3O43525 872 aa23.6■■□□□ 1.37
TMTC1-203ENST00000539277 UQCRHP07919 91 aa23.6■■□□□ 1.37
TMTC1-203ENST00000539277 PPP1R9BQ96SB3 815 aa23.6■■□□□ 1.37
TMTC1-203ENST00000539277 TERF1P54274 439 aa23.58■■□□□ 1.37
TMTC1-203ENST00000539277 TAF7Q15545 349 aaPredicted RBP23.58■■□□□ 1.37
TMTC1-203ENST00000539277 C1orf141Q5JVX7 400 aa23.58■■□□□ 1.37
TMTC1-203ENST00000539277 RAPGEF4Q8WZA2 1011 aa23.58■■□□□ 1.37
TMTC1-203ENST00000539277 STRN4Q9NRL3 753 aa23.58■■□□□ 1.37
TMTC1-203ENST00000539277 HTATSF1O43719 755 aaKnown RBP23.57■■□□□ 1.36
TMTC1-203ENST00000539277 SLC4A2P04920 1241 aa23.57■■□□□ 1.36
TMTC1-203ENST00000539277 C1orf115Q9H7X2 142 aa23.57■■□□□ 1.36
TMTC1-203ENST00000539277 ZNF428Q96B54 188 aa23.57■■□□□ 1.36
TMTC1-203ENST00000539277 GBP4Q96PP9 640 aa23.57■■□□□ 1.36
TMTC1-203ENST00000539277 TEFQ10587 303 aa23.56■■□□□ 1.36
TMTC1-203ENST00000539277 AKAP4Q5JQC9 854 aa23.56■■□□□ 1.36
TMTC1-203ENST00000539277 G2E3Q7L622 706 aa23.56■■□□□ 1.36
TMTC1-203ENST00000539277 SKOR2Q2VWA4 1001 aaPredicted RBP23.55■■□□□ 1.36
TMTC1-203ENST00000539277 DDX19BQ9UMR2 479 aa23.54■■□□□ 1.36
TMTC1-203ENST00000539277 AMOTQ4VCS5 1084 aa23.54■■□□□ 1.36
TMTC1-203ENST00000539277 TOM1L2Q6ZVM7 507 aa23.53■■□□□ 1.36
TMTC1-203ENST00000539277 PIP4K2BP78356 416 aa23.53■■□□□ 1.36
TMTC1-203ENST00000539277 FOXD4L1Q9NU39 408 aa23.53■■□□□ 1.36
TMTC1-203ENST00000539277 MEGF6O75095 1541 aa23.53■■□□□ 1.36
TMTC1-203ENST00000539277 RNMTO43148 476 aaKnown RBP23.52■■□□□ 1.36
TMTC1-203ENST00000539277 EIF2S2P20042 333 aaKnown RBP23.52■■□□□ 1.36
TMTC1-203ENST00000539277 DDIT3P35638 169 aa23.52■■□□□ 1.36
TMTC1-203ENST00000539277 CEMIPQ8WUJ3 1361 aa23.52■■□□□ 1.36
TMTC1-203ENST00000539277 F6X3S4 739 aa23.52■■□□□ 1.35
TMTC1-203ENST00000539277 TATP17735 454 aaPredicted RBP23.52■■□□□ 1.35
TMTC1-203ENST00000539277 BRPF1P55201 1214 aaPredicted RBP23.52■■□□□ 1.35
TMTC1-203ENST00000539277 BTBD11A6QL63 1104 aa23.51■■□□□ 1.35
TMTC1-203ENST00000539277 COL18A1P39060 1754 aa23.51■■□□□ 1.35
TMTC1-203ENST00000539277 NCAPD2Q15021 1401 aa23.5■■□□□ 1.35
TMTC1-203ENST00000539277 CPDO75976 1380 aa23.5■■□□□ 1.35
TMTC1-203ENST00000539277 HSP90AB1P08238 724 aaKnown RBP23.49■■□□□ 1.35
TMTC1-203ENST00000539277 CAMTA1Q9Y6Y1 1673 aa23.49■■□□□ 1.35
TMTC1-203ENST00000539277 CRYBG1Q9Y4K1 1723 aa23.49■■□□□ 1.35
TMTC1-203ENST00000539277 PDE4CQ08493 712 aa23.49■■□□□ 1.35
TMTC1-203ENST00000539277 LARP1Q6PKG0 1096 aaKnown RBP23.49■■□□□ 1.35
TMTC1-203ENST00000539277 SLC4A10Q6U841 1118 aa23.49■■□□□ 1.35
TMTC1-203ENST00000539277 ZBTB40Q9NUA8 1239 aa23.49■■□□□ 1.35
TMTC1-203ENST00000539277 RWDD1Q9H446 243 aaPredicted RBP23.48■■□□□ 1.35
TMTC1-203ENST00000539277 RAB3GAP1Q15042 981 aa23.48■■□□□ 1.35
TMTC1-203ENST00000539277 PRAMEF22A3QJZ6 481 aa23.47■■□□□ 1.35
TMTC1-203ENST00000539277 ANXA1P04083 346 aa23.47■■□□□ 1.35
TMTC1-203ENST00000539277 SLC39A6Q13433 755 aa23.47■■□□□ 1.35
TMTC1-203ENST00000539277 LRRC37A3O60309 1634 aa23.47■■□□□ 1.35
TMTC1-203ENST00000539277 ARHGAP45Q92619 1136 aa23.47■■□□□ 1.35
TMTC1-203ENST00000539277 ABCC4O15439 1325 aa23.47■■□□□ 1.35
TMTC1-203ENST00000539277 EVA1CP58658 441 aa23.46■■□□□ 1.35
TMTC1-203ENST00000539277 MTERF4Q7Z6M4 381 aaKnown RBP23.46■■□□□ 1.35
TMTC1-203ENST00000539277 API5Q9BZZ5 524 aaKnown RBP23.46■■□□□ 1.35
TMTC1-203ENST00000539277 ZBTB7BO15156 539 aaPredicted RBP23.46■■□□□ 1.35
TMTC1-203ENST00000539277 CYP27B1O15528 508 aa23.46■■□□□ 1.35
TMTC1-203ENST00000539277 STK31Q9BXU1 1019 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms