RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-210ENST00000539191 PHKG2P15735 406 aa11.45□□□□□ -0.58
NPIPB4-210ENST00000539191 AEBP1Q8IUX7 1158 aa11.45□□□□□ -0.58
NPIPB4-210ENST00000539191 PXDNLA1KZ92 1463 aa11.44□□□□□ -0.58
NPIPB4-210ENST00000539191 A0A0G2JLW4 131 aa11.44□□□□□ -0.58
NPIPB4-210ENST00000539191 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
NPIPB4-210ENST00000539191 SPG7Q9UQ90 795 aa11.44□□□□□ -0.58
NPIPB4-210ENST00000539191 KDM6AO15550 1401 aaPredicted RBP11.43□□□□□ -0.58
NPIPB4-210ENST00000539191 TJP1Q07157 1748 aa11.43□□□□□ -0.58
NPIPB4-210ENST00000539191 WASHC2AQ641Q2 1341 aa11.43□□□□□ -0.58
NPIPB4-210ENST00000539191 NKX1-1Q15270 411 aaPredicted RBP11.43□□□□□ -0.58
NPIPB4-210ENST00000539191 SMARCC1Q92922 1105 aaPredicted RBP11.43□□□□□ -0.58
NPIPB4-210ENST00000539191 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
NPIPB4-210ENST00000539191 KDRP35968 1356 aa11.42□□□□□ -0.58
NPIPB4-210ENST00000539191 SRP68Q9UHB9 627 aaKnown RBP11.42□□□□□ -0.58
NPIPB4-210ENST00000539191 KIF24Q5T7B8 1368 aa11.41□□□□□ -0.58
NPIPB4-210ENST00000539191 PTCD1O75127 700 aaKnown RBP11.41□□□□□ -0.58
NPIPB4-210ENST00000539191 SSFA2P28290 1259 aa11.41□□□□□ -0.58
NPIPB4-210ENST00000539191 HTRA3P83110 453 aa11.41□□□□□ -0.58
NPIPB4-210ENST00000539191 IFNL2Q8IZJ0 200 aa11.41□□□□□ -0.58
NPIPB4-210ENST00000539191 FLAD1Q8NFF5 587 aa11.41□□□□□ -0.58
NPIPB4-210ENST00000539191 BCS1LQ9Y276 419 aa11.41□□□□□ -0.58
NPIPB4-210ENST00000539191 KIF3CO14782 793 aa11.4□□□□□ -0.58
NPIPB4-210ENST00000539191 DPEP1P16444 411 aa11.4□□□□□ -0.58
NPIPB4-210ENST00000539191 SCN11AQ9UI33 1791 aa11.4□□□□□ -0.58
NPIPB4-210ENST00000539191 ZNF530Q6P9A1 599 aaPredicted RBP11.39□□□□□ -0.59
NPIPB4-210ENST00000539191 ARHGEF1Q92888 912 aaKnown RBP11.39□□□□□ -0.59
NPIPB4-210ENST00000539191 PANK3Q9H999 370 aa11.39□□□□□ -0.59
NPIPB4-210ENST00000539191 NMRK2Q9NPI5 230 aa11.39□□□□□ -0.59
NPIPB4-210ENST00000539191 CCDC88AQ3V6T2 1871 aa11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 C10orf71Q711Q0 1435 aa11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 AFDNP55196 1824 aaKnown RBP11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 ARFGEF1Q9Y6D6 1849 aa11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 GYS1P13807 737 aa11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 HSPA6P17066 643 aa11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 TRIM26Q12899 539 aaPredicted RBP11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 CNGB1Q14028 1251 aaPredicted RBP11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 CDCA8Q53HL2 280 aa11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 TRAPPC3LQ5T215 181 aa11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 ARHGAP27Q6ZUM4 889 aa11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 ADAMTS7Q9UKP4 1686 aa11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 SBF1O95248 1867 aa11.38□□□□□ -0.59
NPIPB4-210ENST00000539191 HSPA5P11021 654 aaKnown RBP11.37□□□□□ -0.59
NPIPB4-210ENST00000539191 CHRNA5P30532 468 aa11.37□□□□□ -0.59
NPIPB4-210ENST00000539191 DDR1Q08345 913 aa11.37□□□□□ -0.59
NPIPB4-210ENST00000539191 IFFO2Q5TF58 517 aa11.37□□□□□ -0.59
NPIPB4-210ENST00000539191 RTCBQ9Y3I0 505 aaKnown RBP11.37□□□□□ -0.59
NPIPB4-210ENST00000539191 FCHSD2O94868 740 aa11.36□□□□□ -0.59
NPIPB4-210ENST00000539191 CABP4P57796 275 aa11.36□□□□□ -0.59
NPIPB4-210ENST00000539191 FKBP8Q14318 412 aa11.36□□□□□ -0.59
NPIPB4-210ENST00000539191 NFATC2IPQ8NCF5 419 aa11.36□□□□□ -0.59
NPIPB4-210ENST00000539191 ZNF831Q5JPB2 1677 aa11.36□□□□□ -0.59
NPIPB4-210ENST00000539191 SLC24A1O60721 1099 aa11.35□□□□□ -0.59
NPIPB4-210ENST00000539191 KCNA3P22001 575 aa11.35□□□□□ -0.59
NPIPB4-210ENST00000539191 RFC4P35249 363 aa11.35□□□□□ -0.59
NPIPB4-210ENST00000539191 SULT6B1Q6IMI4 303 aa11.35□□□□□ -0.59
NPIPB4-210ENST00000539191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.59
NPIPB4-210ENST00000539191 CACNA1SQ13698 1873 aa11.35□□□□□ -0.59
NPIPB4-210ENST00000539191 WDR90Q96KV7 1748 aa11.35□□□□□ -0.59
NPIPB4-210ENST00000539191 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
NPIPB4-210ENST00000539191 CRKLP46109 303 aaKnown RBP11.34□□□□□ -0.59
NPIPB4-210ENST00000539191 MTHFSP49914 203 aa11.34□□□□□ -0.59
NPIPB4-210ENST00000539191 SLC39A6Q13433 755 aa11.34□□□□□ -0.59
NPIPB4-210ENST00000539191 LGR6Q9HBX8 967 aa11.34□□□□□ -0.59
NPIPB4-210ENST00000539191 RPS6KA4O75676 772 aa11.33□□□□□ -0.6
NPIPB4-210ENST00000539191 HMOX1P09601 288 aa11.33□□□□□ -0.6
NPIPB4-210ENST00000539191 PLEKHO1Q53GL0 409 aaPredicted RBP11.33□□□□□ -0.6
NPIPB4-210ENST00000539191 DNAJC10Q8IXB1 793 aa11.33□□□□□ -0.6
NPIPB4-210ENST00000539191 DCAF5Q96JK2 942 aa11.33□□□□□ -0.6
NPIPB4-210ENST00000539191 PARP3Q9Y6F1 533 aa11.33□□□□□ -0.6
NPIPB4-210ENST00000539191 CNTNAP4Q9C0A0 1308 aa11.33□□□□□ -0.6
NPIPB4-210ENST00000539191 ERVV-2B6SEH9 535 aa11.32□□□□□ -0.6
NPIPB4-210ENST00000539191 RASSF7Q02833 373 aa11.32□□□□□ -0.6
NPIPB4-210ENST00000539191 C9orf131Q5VYM1 1079 aa11.32□□□□□ -0.6
NPIPB4-210ENST00000539191 MORC1Q86VD1 984 aa11.32□□□□□ -0.6
NPIPB4-210ENST00000539191 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
NPIPB4-210ENST00000539191 CCDC87Q9NVE4 849 aa11.32□□□□□ -0.6
NPIPB4-210ENST00000539191 PRELPP51888 382 aa11.31□□□□□ -0.6
NPIPB4-210ENST00000539191 INTS5Q6P9B9 1019 aaKnown RBP11.31□□□□□ -0.6
NPIPB4-210ENST00000539191 NLGN1Q8N2Q7 840 aa11.31□□□□□ -0.6
NPIPB4-210ENST00000539191 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
NPIPB4-210ENST00000539191 CARMIL3Q8ND23 1372 aa11.3□□□□□ -0.6
NPIPB4-210ENST00000539191 ANKRD31Q8N7Z5 1873 aa11.3□□□□□ -0.6
NPIPB4-210ENST00000539191 TIAM2Q8IVF5 1701 aa11.3□□□□□ -0.6
NPIPB4-210ENST00000539191 IL13P35225 146 aa11.3□□□□□ -0.6
NPIPB4-210ENST00000539191 TGFB2P61812 414 aa11.3□□□□□ -0.6
NPIPB4-210ENST00000539191 C1orf141Q5JVX7 400 aa11.3□□□□□ -0.6
NPIPB4-210ENST00000539191 USPL1Q5W0Q7 1092 aa11.3□□□□□ -0.6
NPIPB4-210ENST00000539191 COL11A2P13942 1736 aaPredicted RBP11.29□□□□□ -0.6
NPIPB4-210ENST00000539191 DLEC1Q9Y238 1755 aa11.29□□□□□ -0.6
NPIPB4-210ENST00000539191 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
NPIPB4-210ENST00000539191 RC3H1Q5TC82 1133 aaKnown RBP11.29□□□□□ -0.6
NPIPB4-210ENST00000539191 RNF181Q9P0P0 153 aa11.29□□□□□ -0.6
NPIPB4-210ENST00000539191 ZBTB1Q9Y2K1 713 aa11.29□□□□□ -0.6
NPIPB4-210ENST00000539191 UBR2Q8IWV8 1755 aa11.28□□□□□ -0.6
NPIPB4-210ENST00000539191 POLRMTO00411 1230 aaKnown RBP11.28□□□□□ -0.6
NPIPB4-210ENST00000539191 BICDL1Q6ZP65 573 aa11.28□□□□□ -0.6
NPIPB4-210ENST00000539191 DNAJC5GQ8N7S2 189 aa11.28□□□□□ -0.6
NPIPB4-210ENST00000539191 RRAGCQ9HB90 399 aa11.28□□□□□ -0.6
NPIPB4-210ENST00000539191 ZNF219Q9P2Y4 722 aaPredicted RBP11.28□□□□□ -0.6
NPIPB4-210ENST00000539191 TOMM70O94826 608 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms