RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 TLL1O43897 1013 aa13.22□□□□□ -0.29
CD9-207ENST00000538418 LDHBP07195 334 aaKnown RBP13.22□□□□□ -0.29
CD9-207ENST00000538418 ITGAEP38570 1179 aa13.22□□□□□ -0.29
CD9-207ENST00000538418 PLCB3Q01970 1234 aa13.22□□□□□ -0.29
CD9-207ENST00000538418 DSC3Q14574 896 aa13.22□□□□□ -0.29
CD9-207ENST00000538418 TRMT44Q8IYL2 757 aaKnown RBP13.22□□□□□ -0.29
CD9-207ENST00000538418 MRS2Q9HD23 443 aa13.22□□□□□ -0.29
CD9-207ENST00000538418 NCAPD3P42695 1498 aa13.22□□□□□ -0.29
CD9-207ENST00000538418 CADPSQ9ULU8 1353 aa13.21□□□□□ -0.29
CD9-207ENST00000538418 PRPF40AO75400 957 aaKnown RBP13.21□□□□□ -0.29
CD9-207ENST00000538418 MAPK8P45983 427 aa13.21□□□□□ -0.29
CD9-207ENST00000538418 EMP3P54852 163 aa13.21□□□□□ -0.29
CD9-207ENST00000538418 WNT2BQ93097 391 aa13.21□□□□□ -0.29
CD9-207ENST00000538418 DMRTB1Q96MA1 342 aa13.21□□□□□ -0.29
CD9-207ENST00000538418 FAM161BQ96MY7 647 aa13.21□□□□□ -0.29
CD9-207ENST00000538418 PRKD2Q9BZL6 878 aa13.21□□□□□ -0.29
CD9-207ENST00000538418 WBP1LQ9NX94 342 aa13.21□□□□□ -0.29
CD9-207ENST00000538418 ATAD2Q6PL18 1390 aa13.2□□□□□ -0.3
CD9-207ENST00000538418 C16orf46Q6P387 395 aa13.2□□□□□ -0.3
CD9-207ENST00000538418 METTL16Q86W50 562 aaKnown RBP13.2□□□□□ -0.3
CD9-207ENST00000538418 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.2□□□□□ -0.3
CD9-207ENST00000538418 BACH1O14867 736 aa13.19□□□□□ -0.3
CD9-207ENST00000538418 ZPR1O75312 459 aa13.19□□□□□ -0.3
CD9-207ENST00000538418 SCTRP47872 440 aa13.19□□□□□ -0.3
CD9-207ENST00000538418 RAB15P59190 212 aa13.19□□□□□ -0.3
CD9-207ENST00000538418 LSM11P83369 360 aaKnown RBP eCLIP13.19□□□□□ -0.3
CD9-207ENST00000538418 EHHADHQ08426 723 aa13.19□□□□□ -0.3
CD9-207ENST00000538418 TMC4Q7Z404 712 aa13.19□□□□□ -0.3
CD9-207ENST00000538418 NT5DC4Q86YG4 428 aa13.19□□□□□ -0.3
CD9-207ENST00000538418 TNS4Q8IZW8 715 aa13.19□□□□□ -0.3
CD9-207ENST00000538418 DUSP9Q99956 384 aaKnown RBP13.19□□□□□ -0.3
CD9-207ENST00000538418 SAP130Q9H0E3 1048 aa13.19□□□□□ -0.3
CD9-207ENST00000538418 SORBS3O60504 671 aa13.18□□□□□ -0.3
CD9-207ENST00000538418 EIF1AXP47813 144 aaKnown RBP13.18□□□□□ -0.3
CD9-207ENST00000538418 ALKBH2Q6NS38 261 aa13.18□□□□□ -0.3
CD9-207ENST00000538418 KCTD15Q96SI1 283 aaPredicted RBP13.18□□□□□ -0.3
CD9-207ENST00000538418 FAM205CA6NFA0 338 aa13.17□□□□□ -0.3
CD9-207ENST00000538418 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
CD9-207ENST00000538418 DAB2P98082 770 aa13.17□□□□□ -0.3
CD9-207ENST00000538418 AAMPQ13685 434 aa13.17□□□□□ -0.3
CD9-207ENST00000538418 TANGO6Q9C0B7 1094 aa13.17□□□□□ -0.3
CD9-207ENST00000538418 SLC6A16Q9GZN6 736 aa13.17□□□□□ -0.3
CD9-207ENST00000538418 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
CD9-207ENST00000538418 METTL5Q9NRN9 209 aaKnown RBP13.17□□□□□ -0.3
CD9-207ENST00000538418 CCDC87Q9NVE4 849 aa13.17□□□□□ -0.3
CD9-207ENST00000538418 WASLO00401 505 aaPredicted RBP13.16□□□□□ -0.3
CD9-207ENST00000538418 FZD6O60353 706 aa13.16□□□□□ -0.3
CD9-207ENST00000538418 SCNN1DP51172 638 aa13.16□□□□□ -0.3
CD9-207ENST00000538418 CHMP7Q8WUX9 453 aaPredicted RBP13.16□□□□□ -0.3
CD9-207ENST00000538418 RNF34Q969K3 372 aa13.16□□□□□ -0.3
CD9-207ENST00000538418 TSPAN10Q9H1Z9 355 aaPredicted RBP13.16□□□□□ -0.3
CD9-207ENST00000538418 IGHA2P01877 340 aa13.15□□□□□ -0.3
CD9-207ENST00000538418 GDF10P55107 478 aa13.15□□□□□ -0.3
CD9-207ENST00000538418 FANCCQ00597 558 aa13.15□□□□□ -0.3
CD9-207ENST00000538418 DPH6Q7L8W6 267 aa13.15□□□□□ -0.3
CD9-207ENST00000538418 FAM129BQ96TA1 746 aa13.15□□□□□ -0.3
CD9-207ENST00000538418 TINF2Q9BSI4 451 aa13.15□□□□□ -0.3
CD9-207ENST00000538418 EPHA4P54764 986 aa13.14□□□□□ -0.31
CD9-207ENST00000538418 PSMD2Q13200 908 aa13.14□□□□□ -0.31
CD9-207ENST00000538418 PDE3BQ13370 1112 aa13.14□□□□□ -0.31
CD9-207ENST00000538418 TGIF2Q9GZN2 237 aa13.14□□□□□ -0.31
CD9-207ENST00000538418 RNF19AQ9NV58 838 aa13.14□□□□□ -0.31
CD9-207ENST00000538418 STIM2Q9P246 746 aa13.14□□□□□ -0.31
CD9-207ENST00000538418 VTI1BQ9UEU0 232 aa13.14□□□□□ -0.31
CD9-207ENST00000538418 ERVH48-1M5A8F1 160 aa13.13□□□□□ -0.31
CD9-207ENST00000538418 ERVK-9P63128 1117 aa13.13□□□□□ -0.31
CD9-207ENST00000538418 ATP2B2Q01814 1243 aa13.13□□□□□ -0.31
CD9-207ENST00000538418 SLC43A3Q8NBI5 491 aa13.13□□□□□ -0.31
CD9-207ENST00000538418 MARVELD3Q96A59 401 aa13.13□□□□□ -0.31
CD9-207ENST00000538418 ALKBH8Q96BT7 664 aaKnown RBP13.13□□□□□ -0.31
CD9-207ENST00000538418 A0A1W2PRU2 124 aa13.12□□□□□ -0.31
CD9-207ENST00000538418 GPR182O15218 404 aa13.12□□□□□ -0.31
CD9-207ENST00000538418 SH3BP2P78314 561 aa13.12□□□□□ -0.31
CD9-207ENST00000538418 CC2D2BQ6DHV5 1058 aa13.12□□□□□ -0.31
CD9-207ENST00000538418 WWC3Q9ULE0 1092 aa13.12□□□□□ -0.31
CD9-207ENST00000538418 TNFRSF10BO14763 440 aa13.11□□□□□ -0.31
CD9-207ENST00000538418 INTS6LQ5JSJ4 861 aaKnown RBP13.11□□□□□ -0.31
CD9-207ENST00000538418 COX20Q5RI15 118 aa13.11□□□□□ -0.31
CD9-207ENST00000538418 GIMAP6Q6P9H5 292 aa13.11□□□□□ -0.31
CD9-207ENST00000538418 OSBPL3Q9H4L5 887 aa13.11□□□□□ -0.31
CD9-207ENST00000538418 CCSER2Q9H7U1 834 aa13.11□□□□□ -0.31
CD9-207ENST00000538418 CUX2O14529 1486 aa13.1□□□□□ -0.31
CD9-207ENST00000538418 PPP1R12BO60237 982 aaPredicted RBP13.1□□□□□ -0.31
CD9-207ENST00000538418 ST18O60284 1047 aa13.1□□□□□ -0.31
CD9-207ENST00000538418 STAU1O95793 577 aaKnown RBP13.1□□□□□ -0.31
CD9-207ENST00000538418 INHAP05111 366 aa13.1□□□□□ -0.31
CD9-207ENST00000538418 PRKAG2Q9UGJ0 569 aa13.1□□□□□ -0.31
CD9-207ENST00000538418 SERTAD1Q9UHV2 236 aa13.1□□□□□ -0.31
CD9-207ENST00000538418 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
CD9-207ENST00000538418 ZNF76P36508 570 aa13.09□□□□□ -0.31
CD9-207ENST00000538418 STAG2Q8N3U4 1231 aa13.09□□□□□ -0.31
CD9-207ENST00000538418 CAPN10Q9HC96 672 aa13.09□□□□□ -0.31
CD9-207ENST00000538418 NCLP19338 710 aaKnown RBP13.08□□□□□ -0.32
CD9-207ENST00000538418 ABTB2Q8N961 1025 aa13.08□□□□□ -0.32
CD9-207ENST00000538418 SLC4A9Q96Q91 983 aa13.08□□□□□ -0.32
CD9-207ENST00000538418 DNAJC2Q99543 621 aaKnown RBP13.08□□□□□ -0.32
CD9-207ENST00000538418 C2orf49Q9BVC5 232 aaPredicted RBP13.08□□□□□ -0.32
CD9-207ENST00000538418 FCF1Q9Y324 198 aaKnown RBP13.08□□□□□ -0.32
CD9-207ENST00000538418 VASH1Q7L8A9 365 aaPredicted RBP13.07□□□□□ -0.32
CD9-207ENST00000538418 SETDB2Q96T68 719 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms