RNA–Protein interactions for RNA: ENST00000538046.6

KDM2B-206, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best) BASIC

Gene KDM2B, Length 2,301 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-206ENST00000538046 NAP1L5Q96NT1 182 aaPredicted RBP11.92□□□□□ -0.5
KDM2B-206ENST00000538046 IL2RBP14784 551 aa11.91□□□□□ -0.5
KDM2B-206ENST00000538046 RBM10P98175 930 aaKnown RBP11.91□□□□□ -0.5
KDM2B-206ENST00000538046 IL13P35225 146 aa11.91□□□□□ -0.5
KDM2B-206ENST00000538046 L1TD1Q5T7N2 865 aaKnown RBP11.91□□□□□ -0.5
KDM2B-206ENST00000538046 ZKSCAN2Q63HK3 967 aa11.91□□□□□ -0.5
KDM2B-206ENST00000538046 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
KDM2B-206ENST00000538046 ONECUT3O60422 494 aaPredicted RBP11.9□□□□□ -0.5
KDM2B-206ENST00000538046 DDB1Q16531 1140 aa11.9□□□□□ -0.5
KDM2B-206ENST00000538046 RWDD1Q9H446 243 aaPredicted RBP11.9□□□□□ -0.5
KDM2B-206ENST00000538046 BECN1Q14457 450 aa11.89□□□□□ -0.51
KDM2B-206ENST00000538046 FCHSD2O94868 740 aa11.89□□□□□ -0.51
KDM2B-206ENST00000538046 HMOX1P09601 288 aa11.89□□□□□ -0.51
KDM2B-206ENST00000538046 FAM182BQ5T319 152 aa11.89□□□□□ -0.51
KDM2B-206ENST00000538046 SULT6B1Q6IMI4 303 aa11.89□□□□□ -0.51
KDM2B-206ENST00000538046 FTSJ3Q8IY81 847 aaKnown RBP11.89□□□□□ -0.51
KDM2B-206ENST00000538046 CDCA7Q9BWT1 371 aaPredicted RBP11.89□□□□□ -0.51
KDM2B-206ENST00000538046 IGSF1Q8N6C5 1336 aa11.88□□□□□ -0.51
KDM2B-206ENST00000538046 EXOC5O00471 708 aa11.88□□□□□ -0.51
KDM2B-206ENST00000538046 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
KDM2B-206ENST00000538046 DZIP1LQ8IYY4 767 aaKnown RBP11.88□□□□□ -0.51
KDM2B-206ENST00000538046 BRWD3Q6RI45 1802 aa11.88□□□□□ -0.51
KDM2B-206ENST00000538046 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
KDM2B-206ENST00000538046 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
KDM2B-206ENST00000538046 RIPK4P57078 832 aa11.88□□□□□ -0.51
KDM2B-206ENST00000538046 MVPQ14764 893 aaKnown RBP11.88□□□□□ -0.51
KDM2B-206ENST00000538046 KRT27Q7Z3Y8 459 aa11.88□□□□□ -0.51
KDM2B-206ENST00000538046 BCL2L13Q9BXK5 485 aa11.88□□□□□ -0.51
KDM2B-206ENST00000538046 TRIM35Q9UPQ4 493 aa11.88□□□□□ -0.51
KDM2B-206ENST00000538046 WNK3Q9BYP7 1800 aa11.88□□□□□ -0.51
KDM2B-206ENST00000538046 MEGF6O75095 1541 aa11.87□□□□□ -0.51
KDM2B-206ENST00000538046 RLBP1P12271 317 aa11.87□□□□□ -0.51
KDM2B-206ENST00000538046 SMC4Q9NTJ3 1288 aa11.87□□□□□ -0.51
KDM2B-206ENST00000538046 DISP2A7MBM2 1401 aa11.87□□□□□ -0.51
KDM2B-206ENST00000538046 FGD1P98174 961 aa11.87□□□□□ -0.51
KDM2B-206ENST00000538046 EXOSC9Q06265 439 aaKnown RBP11.87□□□□□ -0.51
KDM2B-206ENST00000538046 DDX54Q8TDD1 881 aaKnown RBP11.87□□□□□ -0.51
KDM2B-206ENST00000538046 PARP4Q9UKK3 1724 aaKnown RBP11.86□□□□□ -0.51
KDM2B-206ENST00000538046 LRRC37A3O60309 1634 aa11.86□□□□□ -0.51
KDM2B-206ENST00000538046 TSR2Q969E8 191 aaKnown RBP11.86□□□□□ -0.51
KDM2B-206ENST00000538046 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
KDM2B-206ENST00000538046 IPO8O15397 1037 aaKnown RBP11.85□□□□□ -0.51
KDM2B-206ENST00000538046 CALD1Q05682 793 aaKnown RBP11.85□□□□□ -0.51
KDM2B-206ENST00000538046 ZCRB1Q8TBF4 217 aaKnown RBP11.85□□□□□ -0.51
KDM2B-206ENST00000538046 DDX19BQ9UMR2 479 aa11.85□□□□□ -0.51
KDM2B-206ENST00000538046 ZNF428Q96B54 188 aa11.85□□□□□ -0.51
KDM2B-206ENST00000538046 OVOS2A0A0G2JMS6 1433 aa11.84□□□□□ -0.51
KDM2B-206ENST00000538046 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
KDM2B-206ENST00000538046 RGPD1P0DJD0 1748 aa11.84□□□□□ -0.51
KDM2B-206ENST00000538046 KIF16BQ96L93 1317 aa11.84□□□□□ -0.51
KDM2B-206ENST00000538046 ATF7IPQ6VMQ6 1270 aa11.84□□□□□ -0.51
KDM2B-206ENST00000538046 KAT6BQ8WYB5 2073 aa11.84□□□□□ -0.51
KDM2B-206ENST00000538046 NCAPD2Q15021 1401 aa11.83□□□□□ -0.51
KDM2B-206ENST00000538046 ALDH1L2Q3SY69 923 aa11.83□□□□□ -0.51
KDM2B-206ENST00000538046 MARCH10Q8NA82 808 aaPredicted RBP11.83□□□□□ -0.52
KDM2B-206ENST00000538046 SSH1Q8WYL5 1049 aa11.83□□□□□ -0.52
KDM2B-206ENST00000538046 UPF2Q9HAU5 1272 aaKnown RBP11.83□□□□□ -0.52
KDM2B-206ENST00000538046 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
KDM2B-206ENST00000538046 TNNQ9UQP3 1299 aa11.83□□□□□ -0.52
KDM2B-206ENST00000538046 KDRP35968 1356 aa11.83□□□□□ -0.52
KDM2B-206ENST00000538046 VIRMAQ69YN4 1812 aaKnown RBP11.83□□□□□ -0.52
KDM2B-206ENST00000538046 TRIM27P14373 513 aa11.82□□□□□ -0.52
KDM2B-206ENST00000538046 PRKAR2BP31323 418 aa11.82□□□□□ -0.52
KDM2B-206ENST00000538046 PDE4CQ08493 712 aa11.82□□□□□ -0.52
KDM2B-206ENST00000538046 PDZRN3Q9UPQ7 1066 aa11.82□□□□□ -0.52
KDM2B-206ENST00000538046 PCDH11XQ9BZA7 1347 aa11.82□□□□□ -0.52
KDM2B-206ENST00000538046 PCDH11YQ9BZA8 1340 aa11.82□□□□□ -0.52
KDM2B-206ENST00000538046 HDAC1Q13547 482 aaPredicted RBP11.81□□□□□ -0.52
KDM2B-206ENST00000538046 PLEKHO1Q53GL0 409 aaPredicted RBP11.81□□□□□ -0.52
KDM2B-206ENST00000538046 CLCN1P35523 988 aa11.81□□□□□ -0.52
KDM2B-206ENST00000538046 NFE2L2Q16236 605 aa11.81□□□□□ -0.52
KDM2B-206ENST00000538046 FAM196AQ6ZSG2 479 aa11.81□□□□□ -0.52
KDM2B-206ENST00000538046 ITPRIPQ8IWB1 547 aa11.81□□□□□ -0.52
KDM2B-206ENST00000538046 CHMP4BQ9H444 224 aaKnown RBP11.81□□□□□ -0.52
KDM2B-206ENST00000538046 LMOD3Q0VAK6 560 aa11.8□□□□□ -0.52
KDM2B-206ENST00000538046 AMOTQ4VCS5 1084 aa11.8□□□□□ -0.52
KDM2B-206ENST00000538046 ZNF530Q6P9A1 599 aaPredicted RBP11.8□□□□□ -0.52
KDM2B-206ENST00000538046 NOB1Q9ULX3 412 aaKnown RBP11.8□□□□□ -0.52
KDM2B-206ENST00000538046 CYP27B1O15528 508 aa11.8□□□□□ -0.52
KDM2B-206ENST00000538046 BRPF1P55201 1214 aaPredicted RBP11.8□□□□□ -0.52
KDM2B-206ENST00000538046 ACSBG1Q96GR2 724 aa11.8□□□□□ -0.52
KDM2B-206ENST00000538046 C1orf141Q5JVX7 400 aa11.79□□□□□ -0.52
KDM2B-206ENST00000538046 SYTL4Q96C24 671 aaPredicted RBP11.79□□□□□ -0.52
KDM2B-206ENST00000538046 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.528e-7■□□□□ 11.3
KDM2B-206ENST00000538046 PKD1L3Q7Z443 1732 aa11.79□□□□□ -0.52
KDM2B-206ENST00000538046 SHANK3Q9BYB0 1731 aa11.79□□□□□ -0.52
KDM2B-206ENST00000538046 TRIM37O94972 964 aa11.78□□□□□ -0.52
KDM2B-206ENST00000538046 GNAI1P63096 354 aa11.78□□□□□ -0.52
KDM2B-206ENST00000538046 IFNL2Q8IZJ0 200 aa11.78□□□□□ -0.52
KDM2B-206ENST00000538046 PHACTR3Q96KR7 559 aa11.78□□□□□ -0.52
KDM2B-206ENST00000538046 PHKG2P15735 406 aa11.77□□□□□ -0.52
KDM2B-206ENST00000538046 MTHFSDQ2M296 383 aaKnown RBP11.77□□□□□ -0.52
KDM2B-206ENST00000538046 ANTXR1Q9H6X2 564 aa11.77□□□□□ -0.52
KDM2B-206ENST00000538046 IFT57Q9NWB7 429 aa11.77□□□□□ -0.52
KDM2B-206ENST00000538046 PRDM4Q9UKN5 801 aa11.77□□□□□ -0.52
KDM2B-206ENST00000538046 GOLGA6L3A6NEY3 463 aa11.77□□□□□ -0.53
KDM2B-206ENST00000538046 SF3B2Q13435 895 aaKnown RBP11.77□□□□□ -0.53
KDM2B-206ENST00000538046 TMEM57Q8N5G2 664 aa11.76□□□□□ -0.53
KDM2B-206ENST00000538046 ARHGAP45Q92619 1136 aa11.76□□□□□ -0.53
KDM2B-206ENST00000538046 ZBTB40Q9NUA8 1239 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms