RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 LINC00116Q8NCU8 138 aa11.31□□□□□ -0.6
SPARC-208ENST00000538026 IL17REQ8NFR9 667 aa11.31□□□□□ -0.6
SPARC-208ENST00000538026 UBR3Q6ZT12 1888 aa11.3□□□□□ -0.6
SPARC-208ENST00000538026 COL24A1Q17RW2 1714 aa11.3□□□□□ -0.6
SPARC-208ENST00000538026 RNMTO43148 476 aaKnown RBP11.3□□□□□ -0.6
SPARC-208ENST00000538026 HSP90AB1P08238 724 aaKnown RBP11.3□□□□□ -0.6
SPARC-208ENST00000538026 PRKAR2BP31323 418 aa11.3□□□□□ -0.6
SPARC-208ENST00000538026 SMARCC1Q92922 1105 aaPredicted RBP11.3□□□□□ -0.6
SPARC-208ENST00000538026 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
SPARC-208ENST00000538026 C4BP0C0L5 1744 aa11.29□□□□□ -0.6
SPARC-208ENST00000538026 SIPA1L3O60292 1781 aaPredicted RBP11.29□□□□□ -0.6
SPARC-208ENST00000538026 CABP4P57796 275 aa11.29□□□□□ -0.6
SPARC-208ENST00000538026 C1orf141Q5JVX7 400 aa11.29□□□□□ -0.6
SPARC-208ENST00000538026 COL23A1Q86Y22 540 aaPredicted RBP11.29□□□□□ -0.6
SPARC-208ENST00000538026 CFAP53Q96M91 514 aa11.29□□□□□ -0.6
SPARC-208ENST00000538026 PLEKHF1Q96S99 279 aa11.29□□□□□ -0.6
SPARC-208ENST00000538026 MRC1P22897 1456 aa11.29□□□□□ -0.6
SPARC-208ENST00000538026 U2AF1L5P0DN76 240 aaPredicted RBP11.28□□□□□ -0.6
SPARC-208ENST00000538026 U2AF1Q01081 240 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPARC-208ENST00000538026 RALBP1Q15311 655 aa11.28□□□□□ -0.6
SPARC-208ENST00000538026 SLC52A2Q9HAB3 445 aa11.28□□□□□ -0.6
SPARC-208ENST00000538026 SPON1Q9HCB6 807 aa11.28□□□□□ -0.6
SPARC-208ENST00000538026 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
SPARC-208ENST00000538026 ZNF831Q5JPB2 1677 aa11.27□□□□□ -0.6
SPARC-208ENST00000538026 DLG5Q8TDM6 1919 aa11.27□□□□□ -0.6
SPARC-208ENST00000538026 FCHSD2O94868 740 aa11.27□□□□□ -0.61
SPARC-208ENST00000538026 SLC39A6Q13433 755 aa11.27□□□□□ -0.61
SPARC-208ENST00000538026 PRKRIP1Q9H875 184 aaPredicted RBP11.27□□□□□ -0.61
SPARC-208ENST00000538026 TFCP2L1Q9NZI6 479 aa11.27□□□□□ -0.61
SPARC-208ENST00000538026 ATP6V1AP38606 617 aa11.26□□□□□ -0.61
SPARC-208ENST00000538026 MTFR1LQ9H019 292 aa11.26□□□□□ -0.61
SPARC-208ENST00000538026 NUDCQ9Y266 331 aa11.26□□□□□ -0.61
SPARC-208ENST00000538026 CEMIPQ8WUJ3 1361 aa11.26□□□□□ -0.61
SPARC-208ENST00000538026 MAP3K5Q99683 1374 aa11.26□□□□□ -0.61
SPARC-208ENST00000538026 TJP1Q07157 1748 aa11.26□□□□□ -0.61
SPARC-208ENST00000538026 KCPQ6ZWJ8 1503 aa11.25□□□□□ -0.61
SPARC-208ENST00000538026 GNAT3A8MTJ3 354 aa11.25□□□□□ -0.61
SPARC-208ENST00000538026 KCNQ3O43525 872 aa11.25□□□□□ -0.61
SPARC-208ENST00000538026 PTCD1O75127 700 aaKnown RBP11.25□□□□□ -0.61
SPARC-208ENST00000538026 DCTN1Q14203 1278 aa11.25□□□□□ -0.61
SPARC-208ENST00000538026 GAS2L2Q8NHY3 880 aa11.25□□□□□ -0.61
SPARC-208ENST00000538026 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
SPARC-208ENST00000538026 UBR2Q8IWV8 1755 aa11.25□□□□□ -0.61
SPARC-208ENST00000538026 ZNF316A6NFI3 1004 aaPredicted RBP11.24□□□□□ -0.61
SPARC-208ENST00000538026 CCDC184Q52MB2 194 aa11.24□□□□□ -0.61
SPARC-208ENST00000538026 MYBBP1AQ9BQG0 1328 aaKnown RBP11.24□□□□□ -0.61
SPARC-208ENST00000538026 INTS5Q6P9B9 1019 aaKnown RBP11.23□□□□□ -0.61
SPARC-208ENST00000538026 MCM10Q7L590 875 aa11.23□□□□□ -0.61
SPARC-208ENST00000538026 CICQ96RK0 1608 aaPredicted RBP11.23□□□□□ -0.61
SPARC-208ENST00000538026 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.22□□□□□ -0.61
SPARC-208ENST00000538026 RC3H1Q5TC82 1133 aaKnown RBP11.22□□□□□ -0.61
SPARC-208ENST00000538026 DNAJC10Q8IXB1 793 aa11.22□□□□□ -0.61
SPARC-208ENST00000538026 SLC16A10Q8TF71 515 aa11.22□□□□□ -0.61
SPARC-208ENST00000538026 CNTNAP4Q9C0A0 1308 aa11.21□□□□□ -0.61
SPARC-208ENST00000538026 GNPATO15228 680 aa11.21□□□□□ -0.61
SPARC-208ENST00000538026 MSL1Q68DK7 614 aa11.21□□□□□ -0.61
SPARC-208ENST00000538026 ZNF496Q96IT1 587 aaPredicted RBP11.21□□□□□ -0.61
SPARC-208ENST00000538026 AK7Q96M32 723 aa11.21□□□□□ -0.61
SPARC-208ENST00000538026 PHF14O94880 888 aa11.2□□□□□ -0.62
SPARC-208ENST00000538026 CYP19A1P11511 503 aaPredicted RBP11.2□□□□□ -0.62
SPARC-208ENST00000538026 SSFA2P28290 1259 aa11.2□□□□□ -0.62
SPARC-208ENST00000538026 CRKLP46109 303 aaKnown RBP11.2□□□□□ -0.62
SPARC-208ENST00000538026 ZNF790Q6PG37 636 aa11.2□□□□□ -0.62
SPARC-208ENST00000538026 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
SPARC-208ENST00000538026 THUMPD2Q9BTF0 503 aaKnown RBP11.2□□□□□ -0.62
SPARC-208ENST00000538026 FHDC1Q9C0D6 1143 aaPredicted RBP11.2□□□□□ -0.62
SPARC-208ENST00000538026 ADAMTS8Q9UP79 889 aa11.2□□□□□ -0.62
SPARC-208ENST00000538026 C4AP0C0L4 1744 aa11.19□□□□□ -0.62
SPARC-208ENST00000538026 PRAMEF22A3QJZ6 481 aa11.19□□□□□ -0.62
SPARC-208ENST00000538026 RPS6KA4O75676 772 aa11.19□□□□□ -0.62
SPARC-208ENST00000538026 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
SPARC-208ENST00000538026 ARXQ96QS3 562 aa11.19□□□□□ -0.62
SPARC-208ENST00000538026 SYT17Q9BSW7 474 aa11.19□□□□□ -0.62
SPARC-208ENST00000538026 MIS18AQ9NYP9 233 aa11.19□□□□□ -0.62
SPARC-208ENST00000538026 MSH5O43196 834 aa11.18□□□□□ -0.62
SPARC-208ENST00000538026 HTATSF1O43719 755 aaKnown RBP11.18□□□□□ -0.62
SPARC-208ENST00000538026 TEFQ10587 303 aa11.18□□□□□ -0.62
SPARC-208ENST00000538026 CCDC146Q8IYE0 955 aa11.18□□□□□ -0.62
SPARC-208ENST00000538026 FLAD1Q8NFF5 587 aa11.18□□□□□ -0.62
SPARC-208ENST00000538026 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
SPARC-208ENST00000538026 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
SPARC-208ENST00000538026 PPP1R1BQ9UD71 204 aaPredicted RBP11.17□□□□□ -0.62
SPARC-208ENST00000538026 SRP68Q9UHB9 627 aaKnown RBP11.17□□□□□ -0.62
SPARC-208ENST00000538026 ZBTB1Q9Y2K1 713 aa11.17□□□□□ -0.62
SPARC-208ENST00000538026 RTCBQ9Y3I0 505 aaKnown RBP11.17□□□□□ -0.62
SPARC-208ENST00000538026 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
SPARC-208ENST00000538026 SOS1Q07889 1333 aaPredicted RBP11.16□□□□□ -0.62
SPARC-208ENST00000538026 GYS1P13807 737 aa11.16□□□□□ -0.62
SPARC-208ENST00000538026 TMPOP42166 694 aaKnown RBP11.16□□□□□ -0.62
SPARC-208ENST00000538026 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
SPARC-208ENST00000538026 NLGN2Q8NFZ4 835 aa11.16□□□□□ -0.62
SPARC-208ENST00000538026 TRIM35Q9UPQ4 493 aa11.16□□□□□ -0.62
SPARC-208ENST00000538026 RRP7AQ9Y3A4 280 aaKnown RBP11.16□□□□□ -0.62
SPARC-208ENST00000538026 TAF7Q15545 349 aaPredicted RBP11.15□□□□□ -0.62
SPARC-208ENST00000538026 RTF1Q92541 710 aaKnown RBP11.15□□□□□ -0.62
SPARC-208ENST00000538026 BCL2L12Q9HB09 334 aa11.15□□□□□ -0.62
SPARC-208ENST00000538026 CCDC87Q9NVE4 849 aa11.15□□□□□ -0.62
SPARC-208ENST00000538026 USP16Q9Y5T5 823 aa11.15□□□□□ -0.62
SPARC-208ENST00000538026 KDM3BQ7LBC6 1761 aa11.15□□□□□ -0.62
SPARC-208ENST00000538026 A1BGP04217 495 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms