RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 KCNQ2O43526 872 aa15.45■□□□□ 0.06
TSPAN9-206ENST00000537971 ONECUT3O60422 494 aaPredicted RBP15.45■□□□□ 0.06
TSPAN9-206ENST00000537971 SIK1P57059 783 aa15.45■□□□□ 0.06
TSPAN9-206ENST00000537971 GNAI1P63096 354 aa15.45■□□□□ 0.06
TSPAN9-206ENST00000537971 PLSCR1O15162 318 aa15.44■□□□□ 0.06
TSPAN9-206ENST00000537971 RTN4Q9NQC3 1192 aaKnown RBP15.44■□□□□ 0.06
TSPAN9-206ENST00000537971 USP32Q8NFA0 1604 aa15.44■□□□□ 0.06
TSPAN9-206ENST00000537971 SLC16A10Q8TF71 515 aa15.44■□□□□ 0.06
TSPAN9-206ENST00000537971 RNMTO43148 476 aaKnown RBP15.43■□□□□ 0.06
TSPAN9-206ENST00000537971 IL13P35225 146 aa15.43■□□□□ 0.06
TSPAN9-206ENST00000537971 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
TSPAN9-206ENST00000537971 CCDC87Q9NVE4 849 aa15.43■□□□□ 0.06
TSPAN9-206ENST00000537971 NLGN1Q8N2Q7 840 aa15.43■□□□□ 0.06
TSPAN9-206ENST00000537971 NOP58Q9Y2X3 529 aaKnown RBP15.43■□□□□ 0.06
TSPAN9-206ENST00000537971 NPC1L1Q9UHC9 1359 aa15.43■□□□□ 0.06
TSPAN9-206ENST00000537971 HTATSF1O43719 755 aaKnown RBP15.43■□□□□ 0.06
TSPAN9-206ENST00000537971 FAM177BA6PVY3 158 aa15.42■□□□□ 0.06
TSPAN9-206ENST00000537971 SLC15A2Q16348 729 aa15.42■□□□□ 0.06
TSPAN9-206ENST00000537971 PALLDQ8WX93 1383 aa15.42■□□□□ 0.06
TSPAN9-206ENST00000537971 SNRPA1P09661 255 aaKnown RBP15.42■□□□□ 0.06
TSPAN9-206ENST00000537971 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
TSPAN9-206ENST00000537971 MTHFSDQ2M296 383 aaKnown RBP15.42■□□□□ 0.06
TSPAN9-206ENST00000537971 NHSL1Q5SYE7 1610 aa15.42■□□□□ 0.06
TSPAN9-206ENST00000537971 SHPRHQ149N8 1683 aa15.41■□□□□ 0.06
TSPAN9-206ENST00000537971 COL14A1Q05707 1796 aaKnown RBP15.41■□□□□ 0.06
TSPAN9-206ENST00000537971 IGSF1Q8N6C5 1336 aa15.41■□□□□ 0.06
TSPAN9-206ENST00000537971 APAF1O14727 1248 aa15.41■□□□□ 0.06
TSPAN9-206ENST00000537971 SLC39A6Q13433 755 aa15.41■□□□□ 0.06
TSPAN9-206ENST00000537971 MCM10Q7L590 875 aa15.41■□□□□ 0.06
TSPAN9-206ENST00000537971 SETD1AO15047 1707 aaKnown RBP15.4■□□□□ 0.06
TSPAN9-206ENST00000537971 DDRGK1Q96HY6 314 aa15.4■□□□□ 0.06
TSPAN9-206ENST00000537971 SLC52A2Q9HAB3 445 aa15.4■□□□□ 0.06
TSPAN9-206ENST00000537971 MAP3K5Q99683 1374 aa15.4■□□□□ 0.06
TSPAN9-206ENST00000537971 NECTIN2Q92692 538 aa15.4■□□□□ 0.06
TSPAN9-206ENST00000537971 MSL1Q68DK7 614 aa15.4■□□□□ 0.06
TSPAN9-206ENST00000537971 AIMP1Q12904 312 aaKnown RBP15.39■□□□□ 0.05
TSPAN9-206ENST00000537971 BECN1Q14457 450 aa15.39■□□□□ 0.05
TSPAN9-206ENST00000537971 ST5P78524 1137 aa15.39■□□□□ 0.05
TSPAN9-206ENST00000537971 TPRNQ4KMQ1 711 aa15.39■□□□□ 0.05
TSPAN9-206ENST00000537971 ELL2O00472 640 aaPredicted RBP15.38■□□□□ 0.05
TSPAN9-206ENST00000537971 CYP27B1O15528 508 aa15.38■□□□□ 0.05
TSPAN9-206ENST00000537971 SETDB2Q96T68 719 aa15.38■□□□□ 0.05
TSPAN9-206ENST00000537971 RIC3Q7Z5B4 369 aa15.37■□□□□ 0.05
TSPAN9-206ENST00000537971 PIGBQ92521 554 aa15.37■□□□□ 0.05
TSPAN9-206ENST00000537971 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.37■□□□□ 0.05
TSPAN9-206ENST00000537971 MTFR1LQ9H019 292 aa15.37■□□□□ 0.05
TSPAN9-206ENST00000537971 ASAP1Q9ULH1 1129 aa15.37■□□□□ 0.05
TSPAN9-206ENST00000537971 HDAC5Q9UQL6 1122 aa15.37■□□□□ 0.05
TSPAN9-206ENST00000537971 CAMTA1Q9Y6Y1 1673 aa15.37■□□□□ 0.05
TSPAN9-206ENST00000537971 PER1O15534 1290 aaPredicted RBP15.36■□□□□ 0.05
TSPAN9-206ENST00000537971 MYL6BP14649 208 aa15.36■□□□□ 0.05
TSPAN9-206ENST00000537971 TAF7LQ5H9L4 462 aa15.36■□□□□ 0.05
TSPAN9-206ENST00000537971 HDGFL1Q5TGJ6 251 aa15.36■□□□□ 0.05
TSPAN9-206ENST00000537971 TNS2Q63HR2 1409 aa15.36■□□□□ 0.05
TSPAN9-206ENST00000537971 KCNQ4P56696 695 aa15.36■□□□□ 0.05
TSPAN9-206ENST00000537971 HSP90AB3PQ58FF7 597 aa15.36■□□□□ 0.05
TSPAN9-206ENST00000537971 RCAN3Q9UKA8 241 aa15.35■□□□□ 0.05
TSPAN9-206ENST00000537971 ZNF622Q969S3 477 aaKnown RBP eCLIP15.35■□□□□ 0.05
TSPAN9-206ENST00000537971 ADAMTS8Q9UP79 889 aa15.35■□□□□ 0.05
TSPAN9-206ENST00000537971 DCTN1Q14203 1278 aa15.34■□□□□ 0.05
TSPAN9-206ENST00000537971 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
TSPAN9-206ENST00000537971 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
TSPAN9-206ENST00000537971 TMPOP42166 694 aaKnown RBP15.34■□□□□ 0.05
TSPAN9-206ENST00000537971 CCDC30Q5VVM6 783 aa15.34■□□□□ 0.05
TSPAN9-206ENST00000537971 ZNF790Q6PG37 636 aa15.33■□□□□ 0.05
TSPAN9-206ENST00000537971 ADRA2BP18089 450 aa15.33■□□□□ 0.04
TSPAN9-206ENST00000537971 CHMP3Q9Y3E7 222 aa15.32■□□□□ 0.04
TSPAN9-206ENST00000537971 MYOM1P52179 1685 aa15.32■□□□□ 0.04
TSPAN9-206ENST00000537971 NCLP19338 710 aaKnown RBP15.32■□□□□ 0.04
TSPAN9-206ENST00000537971 SPRYD3Q8NCJ5 442 aa15.32■□□□□ 0.04
TSPAN9-206ENST00000537971 SSFA2P28290 1259 aa15.32■□□□□ 0.04
TSPAN9-206ENST00000537971 C16orf71Q8IYS4 520 aaPredicted RBP15.32■□□□□ 0.04
TSPAN9-206ENST00000537971 LGR6Q9HBX8 967 aa15.32■□□□□ 0.04
TSPAN9-206ENST00000537971 DZIP3Q86Y13 1208 aaKnown RBP15.31■□□□□ 0.04
TSPAN9-206ENST00000537971 XIRP1Q702N8 1843 aaKnown RBP15.31■□□□□ 0.04
TSPAN9-206ENST00000537971 MIS18AQ9NYP9 233 aa15.31■□□□□ 0.04
TSPAN9-206ENST00000537971 TPTE2Q6XPS3 522 aa15.31■□□□□ 0.04
TSPAN9-206ENST00000537971 RPGRQ92834 1020 aaKnown RBP15.31■□□□□ 0.04
TSPAN9-206ENST00000537971 WWC3Q9ULE0 1092 aa15.31■□□□□ 0.04
TSPAN9-206ENST00000537971 CAMKK2Q96RR4 588 aa15.3■□□□□ 0.04
TSPAN9-206ENST00000537971 CD163L1Q9NR16 1453 aa15.3■□□□□ 0.04
TSPAN9-206ENST00000537971 GRIN3BO60391 1043 aa15.3■□□□□ 0.04
TSPAN9-206ENST00000537971 PPP1R42Q7Z4L9 355 aa15.3■□□□□ 0.04
TSPAN9-206ENST00000537971 TBC1D2BQ9UPU7 963 aa15.3■□□□□ 0.04
TSPAN9-206ENST00000537971 BCS1LQ9Y276 419 aa15.3■□□□□ 0.04
TSPAN9-206ENST00000537971 RGPD8O14715 1765 aaPredicted RBP15.3■□□□□ 0.04
TSPAN9-206ENST00000537971 RPS6KA4O75676 772 aa15.29■□□□□ 0.04
TSPAN9-206ENST00000537971 CRKLP46109 303 aaKnown RBP15.29■□□□□ 0.04
TSPAN9-206ENST00000537971 NYXQ9GZU5 481 aa15.29■□□□□ 0.04
TSPAN9-206ENST00000537971 ZBED9Q6R2W3 1325 aa15.29■□□□□ 0.04
TSPAN9-206ENST00000537971 RSPH6AQ9H0K4 717 aa15.29■□□□□ 0.04
TSPAN9-206ENST00000537971 H0YIN7 160 aa15.29■□□□□ 0.04
TSPAN9-206ENST00000537971 THUMPD2Q9BTF0 503 aaKnown RBP15.28■□□□□ 0.04
TSPAN9-206ENST00000537971 ATG3Q9NT62 314 aa15.28■□□□□ 0.04
TSPAN9-206ENST00000537971 SLIT3O75094 1523 aa15.28■□□□□ 0.04
TSPAN9-206ENST00000537971 CNBD1Q8NA66 436 aa15.27■□□□□ 0.04
TSPAN9-206ENST00000537971 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
TSPAN9-206ENST00000537971 IPO8O15397 1037 aaKnown RBP15.27■□□□□ 0.04
TSPAN9-206ENST00000537971 FKBP5Q13451 457 aaPredicted RBP15.27■□□□□ 0.04
TSPAN9-206ENST00000537971 MMP10P09238 476 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms