RNA–Protein interactions for RNA: ENST00000537907.1

TRPT1-206, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 3

Gene TRPT1, Length 602 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-206ENST00000537907 SCN11AQ9UI33 1791 aa23.28■■□□□ 1.32
TRPT1-206ENST00000537907 ITPK1Q13572 414 aa23.28■■□□□ 1.32
TRPT1-206ENST00000537907 AMIGO3Q86WK7 504 aa23.28■■□□□ 1.32
TRPT1-206ENST00000537907 PHACTR3Q96KR7 559 aa23.28■■□□□ 1.32
TRPT1-206ENST00000537907 PNNQ9H307 717 aaKnown RBP23.28■■□□□ 1.32
TRPT1-206ENST00000537907 SPON1Q9HCB6 807 aa23.28■■□□□ 1.32
TRPT1-206ENST00000537907 FCHSD2O94868 740 aa23.27■■□□□ 1.32
TRPT1-206ENST00000537907 SGIP1Q9BQI5 828 aa23.27■■□□□ 1.32
TRPT1-206ENST00000537907 C5P01031 1676 aa23.26■■□□□ 1.31
TRPT1-206ENST00000537907 PRKAR2BP31323 418 aa23.26■■□□□ 1.31
TRPT1-206ENST00000537907 CABP4P57796 275 aa23.26■■□□□ 1.31
TRPT1-206ENST00000537907 WDR43Q15061 677 aaKnown RBP eCLIP23.26■■□□□ 1.31
TRPT1-206ENST00000537907 NFATC2IPQ8NCF5 419 aa23.26■■□□□ 1.31
TRPT1-206ENST00000537907 LINC00116Q8NCU8 138 aa23.26■■□□□ 1.31
TRPT1-206ENST00000537907 TUBGCP6Q96RT7 1819 aa23.26■■□□□ 1.31
TRPT1-206ENST00000537907 RNMTO43148 476 aaKnown RBP23.25■■□□□ 1.31
TRPT1-206ENST00000537907 TFCP2L1Q9NZI6 479 aa23.25■■□□□ 1.31
TRPT1-206ENST00000537907 DLG5Q8TDM6 1919 aa23.25■■□□□ 1.31
TRPT1-206ENST00000537907 QSER1Q2KHR3 1735 aa23.25■■□□□ 1.31
TRPT1-206ENST00000537907 C4BP0C0L5 1744 aa23.23■■□□□ 1.31
TRPT1-206ENST00000537907 MTFR1LQ9H019 292 aa23.23■■□□□ 1.31
TRPT1-206ENST00000537907 SLC52A2Q9HAB3 445 aa23.23■■□□□ 1.31
TRPT1-206ENST00000537907 ATF5Q9Y2D1 282 aaPredicted RBP23.23■■□□□ 1.31
TRPT1-206ENST00000537907 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
TRPT1-206ENST00000537907 MAP3K5Q99683 1374 aa23.22■■□□□ 1.31
TRPT1-206ENST00000537907 TAF1LQ8IZX4 1826 aa23.22■■□□□ 1.31
TRPT1-206ENST00000537907 SMIM5Q71RC9 77 aa23.21■■□□□ 1.31
TRPT1-206ENST00000537907 COL23A1Q86Y22 540 aaPredicted RBP23.21■■□□□ 1.31
TRPT1-206ENST00000537907 IL17REQ8NFR9 667 aa23.2■■□□□ 1.3
TRPT1-206ENST00000537907 MAPK8IP3Q9UPT6 1336 aa23.19■■□□□ 1.3
TRPT1-206ENST00000537907 ATP6V1AP38606 617 aa23.19■■□□□ 1.3
TRPT1-206ENST00000537907 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
TRPT1-206ENST00000537907 CEMIPQ8WUJ3 1361 aa23.18■■□□□ 1.3
TRPT1-206ENST00000537907 SLC16A10Q8TF71 515 aa23.17■■□□□ 1.3
TRPT1-206ENST00000537907 RBM42Q9BTD8 480 aaKnown RBP23.17■■□□□ 1.3
TRPT1-206ENST00000537907 KCPQ6ZWJ8 1503 aa23.17■■□□□ 1.3
TRPT1-206ENST00000537907 GNAT3A8MTJ3 354 aa23.16■■□□□ 1.3
TRPT1-206ENST00000537907 PTCD1O75127 700 aaKnown RBP23.16■■□□□ 1.3
TRPT1-206ENST00000537907 PLEKHF1Q96S99 279 aa23.16■■□□□ 1.3
TRPT1-206ENST00000537907 MRS2Q9HD23 443 aa23.16■■□□□ 1.3
TRPT1-206ENST00000537907 SLC39A6Q13433 755 aa23.15■■□□□ 1.3
TRPT1-206ENST00000537907 AK7Q96M32 723 aa23.15■■□□□ 1.3
TRPT1-206ENST00000537907 COL24A1Q17RW2 1714 aa23.15■■□□□ 1.3
TRPT1-206ENST00000537907 CICQ96RK0 1608 aaPredicted RBP23.15■■□□□ 1.3
TRPT1-206ENST00000537907 DIEXFQ68CQ4 756 aaKnown RBP23.14■■□□□ 1.29
TRPT1-206ENST00000537907 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.13■■□□□ 1.29
TRPT1-206ENST00000537907 UTRNP46939 3433 aa23.13■■□□□ 1.29
TRPT1-206ENST00000537907 COL5A3P25940 1745 aaPredicted RBP23.12■■□□□ 1.29
TRPT1-206ENST00000537907 TJP1Q07157 1748 aa23.12■■□□□ 1.29
TRPT1-206ENST00000537907 UBR3Q6ZT12 1888 aa23.12■■□□□ 1.29
TRPT1-206ENST00000537907 CNTNAP4Q9C0A0 1308 aa23.11■■□□□ 1.29
TRPT1-206ENST00000537907 GNPATO15228 680 aa23.11■■□□□ 1.29
TRPT1-206ENST00000537907 HMGB2P26583 209 aaKnown RBP23.11■■□□□ 1.29
TRPT1-206ENST00000537907 SSFA2P28290 1259 aa23.11■■□□□ 1.29
TRPT1-206ENST00000537907 PPP1R1BQ9UD71 204 aaPredicted RBP23.11■■□□□ 1.29
TRPT1-206ENST00000537907 SIPA1L3O60292 1781 aaPredicted RBP23.11■■□□□ 1.29
TRPT1-206ENST00000537907 GOLGB1Q14789 3259 aaKnown RBP23.11■■□□□ 1.29
TRPT1-206ENST00000537907 PHF14O94880 888 aa23.1■■□□□ 1.29
TRPT1-206ENST00000537907 RC3H1Q5TC82 1133 aaKnown RBP23.1■■□□□ 1.29
TRPT1-206ENST00000537907 RTF1Q92541 710 aaKnown RBP23.1■■□□□ 1.29
TRPT1-206ENST00000537907 ADAMTS8Q9UP79 889 aa23.1■■□□□ 1.29
TRPT1-206ENST00000537907 FLAD1Q8NFF5 587 aa23.09■■□□□ 1.29
TRPT1-206ENST00000537907 RUNDC1Q96C34 613 aa23.09■■□□□ 1.29
TRPT1-206ENST00000537907 MSH5O43196 834 aa23.08■■□□□ 1.29
TRPT1-206ENST00000537907 MSL1Q68DK7 614 aa23.08■■□□□ 1.29
TRPT1-206ENST00000537907 MCM10Q7L590 875 aa23.08■■□□□ 1.29
TRPT1-206ENST00000537907 ARXQ96QS3 562 aa23.08■■□□□ 1.29
TRPT1-206ENST00000537907 CRKLP46109 303 aaKnown RBP23.07■■□□□ 1.28
TRPT1-206ENST00000537907 DCTN1Q14203 1278 aa23.07■■□□□ 1.28
TRPT1-206ENST00000537907 NFE2L2Q16236 605 aa23.07■■□□□ 1.28
TRPT1-206ENST00000537907 DNAJC10Q8IXB1 793 aa23.07■■□□□ 1.28
TRPT1-206ENST00000537907 FHDC1Q9C0D6 1143 aaPredicted RBP23.07■■□□□ 1.28
TRPT1-206ENST00000537907 UBR2Q8IWV8 1755 aa23.06■■□□□ 1.28
TRPT1-206ENST00000537907 HTATSF1O43719 755 aaKnown RBP23.06■■□□□ 1.28
TRPT1-206ENST00000537907 TEFQ10587 303 aa23.06■■□□□ 1.28
TRPT1-206ENST00000537907 CCDC184Q52MB2 194 aa23.06■■□□□ 1.28
TRPT1-206ENST00000537907 INTS5Q6P9B9 1019 aaKnown RBP23.06■■□□□ 1.28
TRPT1-206ENST00000537907 KCNQ3O43525 872 aa23.05■■□□□ 1.28
TRPT1-206ENST00000537907 ZNF790Q6PG37 636 aa23.05■■□□□ 1.28
TRPT1-206ENST00000537907 RPS6KA4O75676 772 aa23.04■■□□□ 1.28
TRPT1-206ENST00000537907 CYP19A1P11511 503 aaPredicted RBP23.04■■□□□ 1.28
TRPT1-206ENST00000537907 LMOD3Q0VAK6 560 aa23.04■■□□□ 1.28
TRPT1-206ENST00000537907 CCDC146Q8IYE0 955 aa23.04■■□□□ 1.28
TRPT1-206ENST00000537907 ZNF496Q96IT1 587 aaPredicted RBP23.04■■□□□ 1.28
TRPT1-206ENST00000537907 MYH14Q7Z406 1995 aaKnown RBP23.03■■□□□ 1.28
TRPT1-206ENST00000537907 VSIG10Q8N0Z9 540 aa23.03■■□□□ 1.28
TRPT1-206ENST00000537907 PNISRQ8TF01 805 aaKnown RBP23.03■■□□□ 1.28
TRPT1-206ENST00000537907 SYT17Q9BSW7 474 aa23.03■■□□□ 1.28
TRPT1-206ENST00000537907 RTCBQ9Y3I0 505 aaKnown RBP23.03■■□□□ 1.28
TRPT1-206ENST00000537907 CCER2I3L3R5 266 aa23.02■■□□□ 1.28
TRPT1-206ENST00000537907 ARHGEF1Q92888 912 aaKnown RBP23.02■■□□□ 1.28
TRPT1-206ENST00000537907 ADRA2BP18089 450 aa23.01■■□□□ 1.27
TRPT1-206ENST00000537907 POLD1P28340 1107 aa23.01■■□□□ 1.27
TRPT1-206ENST00000537907 HEG1Q9ULI3 1381 aa23.01■■□□□ 1.27
TRPT1-206ENST00000537907 TMPOP42166 694 aaKnown RBP23■■□□□ 1.27
TRPT1-206ENST00000537907 BTBD11A6QL63 1104 aa22.99■■□□□ 1.27
TRPT1-206ENST00000537907 RIPK4P57078 832 aa22.99■■□□□ 1.27
TRPT1-206ENST00000537907 TRAPPC3LQ5T215 181 aa22.99■■□□□ 1.27
TRPT1-206ENST00000537907 TTC5Q8N0Z6 440 aa22.99■■□□□ 1.27
TRPT1-206ENST00000537907 THUMPD2Q9BTF0 503 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms