RNA–Protein interactions for RNA: ENST00000537724.1

AC055720.2-201, humanhuman

TSL 3 BASIC

Gene AC055720.2, Length 172 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.2-201ENST00000537724 HRH3Q9Y5N1 445 aa7□□□□□ -1.29
AC055720.2-201ENST00000537724 PHKA2P46019 1235 aa6.99□□□□□ -1.29
AC055720.2-201ENST00000537724 XAGE2Q96GT9 111 aa6.99□□□□□ -1.29
AC055720.2-201ENST00000537724 ZSCAN10Q96SZ4 725 aaPredicted RBP6.99□□□□□ -1.29
AC055720.2-201ENST00000537724 MBIPQ9NS73 344 aa6.99□□□□□ -1.29
AC055720.2-201ENST00000537724 RNF225M0QZC1 329 aaPredicted RBP6.98□□□□□ -1.29
AC055720.2-201ENST00000537724 F11P03951 625 aa6.98□□□□□ -1.29
AC055720.2-201ENST00000537724 CELA2BP08218 269 aaPredicted RBP6.98□□□□□ -1.29
AC055720.2-201ENST00000537724 RASSF7Q02833 373 aa6.98□□□□□ -1.29
AC055720.2-201ENST00000537724 USP4Q13107 963 aa6.98□□□□□ -1.29
AC055720.2-201ENST00000537724 OXLD1Q5BKU9 147 aa6.98□□□□□ -1.29
AC055720.2-201ENST00000537724 FHDC1Q9C0D6 1143 aaPredicted RBP6.98□□□□□ -1.29
AC055720.2-201ENST00000537724 GPAMQ9HCL2 828 aa6.98□□□□□ -1.29
AC055720.2-201ENST00000537724 IGF1RP08069 1367 aa6.97□□□□□ -1.29
AC055720.2-201ENST00000537724 HMGB1P09429 215 aaKnown RBP6.97□□□□□ -1.29
AC055720.2-201ENST00000537724 MAP3K10Q02779 954 aa6.97□□□□□ -1.29
AC055720.2-201ENST00000537724 MCM6Q14566 821 aa6.97□□□□□ -1.29
AC055720.2-201ENST00000537724 TRERF1Q96PN7 1200 aa6.97□□□□□ -1.29
AC055720.2-201ENST00000537724 NUCKS1Q9H1E3 243 aaKnown RBP6.97□□□□□ -1.29
AC055720.2-201ENST00000537724 ETNK1Q9HBU6 452 aa6.97□□□□□ -1.29
AC055720.2-201ENST00000537724 CHIC2Q9UKJ5 165 aa6.97□□□□□ -1.29
AC055720.2-201ENST00000537724 GDF11O95390 407 aa6.96□□□□□ -1.3
AC055720.2-201ENST00000537724 THBS1P07996 1170 aa6.96□□□□□ -1.3
AC055720.2-201ENST00000537724 MARSP56192 900 aaKnown RBP6.96□□□□□ -1.3
AC055720.2-201ENST00000537724 WASHC4Q2M389 1173 aa6.96□□□□□ -1.3
AC055720.2-201ENST00000537724 ESCO1Q5FWF5 840 aa6.96□□□□□ -1.3
AC055720.2-201ENST00000537724 TMEM214Q6NUQ4 689 aaKnown RBP6.96□□□□□ -1.3
AC055720.2-201ENST00000537724 TMEM151AQ8N4L1 468 aa6.96□□□□□ -1.3
AC055720.2-201ENST00000537724 KCTD17Q8N5Z5 321 aa6.96□□□□□ -1.3
AC055720.2-201ENST00000537724 GTF2E1P29083 439 aaPredicted RBP6.95□□□□□ -1.3
AC055720.2-201ENST00000537724 IRS1P35568 1242 aa6.95□□□□□ -1.3
AC055720.2-201ENST00000537724 C4orf17Q53FE4 359 aa6.95□□□□□ -1.3
AC055720.2-201ENST00000537724 GNASQ5JWF2 1037 aa6.95□□□□□ -1.3
AC055720.2-201ENST00000537724 A0A1B0GTH6 734 aa6.94□□□□□ -1.3
AC055720.2-201ENST00000537724 MX2P20592 715 aa6.94□□□□□ -1.3
AC055720.2-201ENST00000537724 SEMA3FQ13275 785 aa6.94□□□□□ -1.3
AC055720.2-201ENST00000537724 TLR1Q15399 786 aa6.94□□□□□ -1.3
AC055720.2-201ENST00000537724 PLPP7Q8NBV4 271 aa6.94□□□□□ -1.3
AC055720.2-201ENST00000537724 SIRT1Q96EB6 747 aa6.94□□□□□ -1.3
AC055720.2-201ENST00000537724 ACDQ96AP0 544 aa6.93□□□□□ -1.3
AC055720.2-201ENST00000537724 ENAMQ9NRM1 1142 aa6.93□□□□□ -1.3
AC055720.2-201ENST00000537724 COG6Q9Y2V7 657 aa6.93□□□□□ -1.3
AC055720.2-201ENST00000537724 BCRP11274 1271 aa6.92□□□□□ -1.3
AC055720.2-201ENST00000537724 PDIA4P13667 645 aaKnown RBP6.92□□□□□ -1.3
AC055720.2-201ENST00000537724 MSX1P28360 303 aa6.92□□□□□ -1.3
AC055720.2-201ENST00000537724 SCNN1DP51172 638 aa6.92□□□□□ -1.3
AC055720.2-201ENST00000537724 GDF10P55107 478 aa6.92□□□□□ -1.3
AC055720.2-201ENST00000537724 MAP7D1Q3KQU3 841 aa6.92□□□□□ -1.3
AC055720.2-201ENST00000537724 PPARGC1BQ86YN6 1023 aaKnown RBP6.92□□□□□ -1.3
AC055720.2-201ENST00000537724 RHBDD1Q8TEB9 315 aa6.92□□□□□ -1.3
AC055720.2-201ENST00000537724 SCARF2Q96GP6 870 aaPredicted RBP6.92□□□□□ -1.3
AC055720.2-201ENST00000537724 RUBCNLQ9H714 662 aa6.92□□□□□ -1.3
AC055720.2-201ENST00000537724 PIK3CDO00329 1044 aa6.91□□□□□ -1.3
AC055720.2-201ENST00000537724 INHAP05111 366 aa6.91□□□□□ -1.3
AC055720.2-201ENST00000537724 SOX11P35716 441 aa6.91□□□□□ -1.3
AC055720.2-201ENST00000537724 UBAP2LQ14157 1087 aaKnown RBP6.91□□□□□ -1.3
AC055720.2-201ENST00000537724 NSFL1CQ9UNZ2 370 aaKnown RBP6.91□□□□□ -1.3
AC055720.2-201ENST00000537724 CSB-PGBD3P0DP91 1061 aa6.9□□□□□ -1.3
AC055720.2-201ENST00000537724 PGBD3Q8N328 593 aa6.9□□□□□ -1.3
AC055720.2-201ENST00000537724 NEDD1Q8NHV4 660 aa6.9□□□□□ -1.3
AC055720.2-201ENST00000537724 CFHR5Q9BXR6 569 aa6.9□□□□□ -1.3
AC055720.2-201ENST00000537724 PLA2G4AP47712 749 aa6.89□□□□□ -1.31
AC055720.2-201ENST00000537724 KANK3Q6NY19 840 aa6.89□□□□□ -1.31
AC055720.2-201ENST00000537724 POM121Q96HA1 1249 aa6.89□□□□□ -1.31
AC055720.2-201ENST00000537724 OXCT2Q9BYC2 517 aaPredicted RBP6.89□□□□□ -1.31
AC055720.2-201ENST00000537724 SERTAD1Q9UHV2 236 aa6.89□□□□□ -1.31
AC055720.2-201ENST00000537724 PHF24Q9UPV7 400 aa6.89□□□□□ -1.31
AC055720.2-201ENST00000537724 CNTNAP5Q8WYK1 1306 aa6.89□□□□□ -1.31
AC055720.2-201ENST00000537724 TMEM229AB2RXF0 380 aa6.88□□□□□ -1.31
AC055720.2-201ENST00000537724 MAP2K3P46734 347 aa6.88□□□□□ -1.31
AC055720.2-201ENST00000537724 SMTNP53814 917 aa6.88□□□□□ -1.31
AC055720.2-201ENST00000537724 LBRQ14739 615 aaKnown RBP6.88□□□□□ -1.31
AC055720.2-201ENST00000537724 EFHC2Q5JST6 749 aa6.88□□□□□ -1.31
AC055720.2-201ENST00000537724 ABHD17AQ96GS6 310 aa6.88□□□□□ -1.31
AC055720.2-201ENST00000537724 CDK11AQ9UQ88 783 aaPredicted RBP6.88□□□□□ -1.31
AC055720.2-201ENST00000537724 DNMT3AQ9Y6K1 912 aaPredicted RBP6.88□□□□□ -1.31
AC055720.2-201ENST00000537724 OIP5O43482 229 aa6.87□□□□□ -1.31
AC055720.2-201ENST00000537724 IGSF3O75054 1194 aa6.87□□□□□ -1.31
AC055720.2-201ENST00000537724 HSP90B1P14625 803 aaKnown RBP6.87□□□□□ -1.31
AC055720.2-201ENST00000537724 TBC1D9Q6ZT07 1266 aa6.87□□□□□ -1.31
AC055720.2-201ENST00000537724 KLRG1Q96E93 195 aa6.87□□□□□ -1.31
AC055720.2-201ENST00000537724 CRISPLD1Q9H336 500 aa6.87□□□□□ -1.31
AC055720.2-201ENST00000537724 ALG2Q9H553 416 aa6.87□□□□□ -1.31
AC055720.2-201ENST00000537724 C1orf115Q9H7X2 142 aa6.87□□□□□ -1.31
AC055720.2-201ENST00000537724 BNIP3LO60238 219 aa6.86□□□□□ -1.31
AC055720.2-201ENST00000537724 SKIP12755 728 aa6.86□□□□□ -1.31
AC055720.2-201ENST00000537724 ATP4AP20648 1035 aa6.86□□□□□ -1.31
AC055720.2-201ENST00000537724 CDK11BP21127 795 aaKnown RBP6.86□□□□□ -1.31
AC055720.2-201ENST00000537724 AIDAQ96BJ3 306 aa6.86□□□□□ -1.31
AC055720.2-201ENST00000537724 NIFKQ9BYG3 293 aaKnown RBP6.86□□□□□ -1.31
AC055720.2-201ENST00000537724 LRRC4BQ9NT99 713 aa6.86□□□□□ -1.31
AC055720.2-201ENST00000537724 ATXN7L1Q9ULK2 861 aaPredicted RBP6.86□□□□□ -1.31
AC055720.2-201ENST00000537724 PCDHGA11Q9Y5H2 935 aa6.86□□□□□ -1.31
AC055720.2-201ENST00000537724 C2CD2LO14523 706 aa6.85□□□□□ -1.31
AC055720.2-201ENST00000537724 FGFR3P22607 806 aa6.85□□□□□ -1.31
AC055720.2-201ENST00000537724 EML3Q32P44 896 aa6.85□□□□□ -1.31
AC055720.2-201ENST00000537724 GPAT2Q6NUI2 795 aa6.85□□□□□ -1.31
AC055720.2-201ENST00000537724 C1orf229Q6ZS94 237 aaPredicted RBP6.85□□□□□ -1.31
AC055720.2-201ENST00000537724 PODNQ7Z5L7 613 aa6.85□□□□□ -1.31
AC055720.2-201ENST00000537724 BEND7Q8N7W2 519 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms