RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 TRPC5Q9UL62 973 aaPredicted RBP12.38□□□□□ -0.43
LMO3-216ENST00000537568 PNPLA6Q8IY17 1366 aa12.38□□□□□ -0.43
LMO3-216ENST00000537568 GDF9O60383 454 aa12.37□□□□□ -0.43
LMO3-216ENST00000537568 RPIAP49247 311 aa12.37□□□□□ -0.43
LMO3-216ENST00000537568 MMP16P51512 607 aa12.37□□□□□ -0.43
LMO3-216ENST00000537568 USP21Q9UK80 565 aa12.37□□□□□ -0.43
LMO3-216ENST00000537568 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
LMO3-216ENST00000537568 TMEM2Q9UHN6 1383 aa12.36□□□□□ -0.43
LMO3-216ENST00000537568 ADAMTS2O95450 1211 aa12.36□□□□□ -0.43
LMO3-216ENST00000537568 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
LMO3-216ENST00000537568 SYMPKQ92797 1274 aaKnown RBP12.36□□□□□ -0.43
LMO3-216ENST00000537568 SPIRE2Q8WWL2 714 aa12.35□□□□□ -0.43
LMO3-216ENST00000537568 CAMSAP2Q08AD1 1489 aa12.34□□□□□ -0.43
LMO3-216ENST00000537568 DXOO77932 396 aaKnown RBP12.34□□□□□ -0.43
LMO3-216ENST00000537568 EID1Q9Y6B2 187 aa12.34□□□□□ -0.43
LMO3-216ENST00000537568 RTEL1-TNFRSF6BF6WH68 1400 aa12.34□□□□□ -0.43
LMO3-216ENST00000537568 PKD2L1Q9P0L9 805 aa12.33□□□□□ -0.44
LMO3-216ENST00000537568 PCDHGC3Q9UN70 934 aa12.33□□□□□ -0.44
LMO3-216ENST00000537568 FDX1P10109 184 aa12.32□□□□□ -0.44
LMO3-216ENST00000537568 FOXC1Q12948 553 aa12.32□□□□□ -0.44
LMO3-216ENST00000537568 R3HDM1Q15032 1099 aaKnown RBP12.32□□□□□ -0.44
LMO3-216ENST00000537568 BEGAINQ9BUH8 593 aa12.32□□□□□ -0.44
LMO3-216ENST00000537568 MBD5Q9P267 1494 aa12.32□□□□□ -0.44
LMO3-216ENST00000537568 ASXL1Q8IXJ9 1541 aa12.32□□□□□ -0.44
LMO3-216ENST00000537568 CD2BP2O95400 341 aaKnown RBP12.31□□□□□ -0.44
LMO3-216ENST00000537568 PCMTD1Q96MG8 357 aaPredicted RBP12.31□□□□□ -0.44
LMO3-216ENST00000537568 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.31□□□□□ -0.44
LMO3-216ENST00000537568 FMN1Q68DA7 1419 aa12.3□□□□□ -0.44
LMO3-216ENST00000537568 NCOA3Q9Y6Q9 1424 aa12.3□□□□□ -0.44
LMO3-216ENST00000537568 ARHGAP35Q9NRY4 1499 aa12.3□□□□□ -0.44
LMO3-216ENST00000537568 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
LMO3-216ENST00000537568 ZBTB24O43167 697 aaPredicted RBP12.3□□□□□ -0.44
LMO3-216ENST00000537568 NDUFV2P19404 249 aa12.3□□□□□ -0.44
LMO3-216ENST00000537568 DDX17Q92841 729 aaKnown RBP12.3□□□□□ -0.44
LMO3-216ENST00000537568 GOPCQ9HD26 462 aa12.3□□□□□ -0.44
LMO3-216ENST00000537568 MROH1Q8NDA8 1641 aa12.29□□□□□ -0.44
LMO3-216ENST00000537568 PLEKHH2Q8IVE3 1493 aa12.29□□□□□ -0.44
LMO3-216ENST00000537568 MS4A1P11836 297 aa12.29□□□□□ -0.44
LMO3-216ENST00000537568 PKDCCQ504Y2 493 aa12.29□□□□□ -0.44
LMO3-216ENST00000537568 RETREG3Q86VR2 466 aa12.29□□□□□ -0.44
LMO3-216ENST00000537568 LRRC59Q96AG4 307 aaKnown RBP12.29□□□□□ -0.44
LMO3-216ENST00000537568 CLUAP1Q96AJ1 413 aa12.29□□□□□ -0.44
LMO3-216ENST00000537568 UNC13BO14795 1591 aa12.29□□□□□ -0.44
LMO3-216ENST00000537568 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
LMO3-216ENST00000537568 FAM187AA6NFU0 413 aa12.27□□□□□ -0.45
LMO3-216ENST00000537568 C6orf229H3BNL8 230 aa12.27□□□□□ -0.45
LMO3-216ENST00000537568 JUNDP17535 347 aa12.27□□□□□ -0.45
LMO3-216ENST00000537568 C19orf44Q9H6X5 657 aa12.27□□□□□ -0.45
LMO3-216ENST00000537568 TRIM32Q13049 653 aa12.26□□□□□ -0.45
LMO3-216ENST00000537568 CCDC24Q8N4L8 307 aa12.26□□□□□ -0.45
LMO3-216ENST00000537568 GJD4Q96KN9 370 aaPredicted RBP12.26□□□□□ -0.45
LMO3-216ENST00000537568 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
LMO3-216ENST00000537568 CAMTA1Q9Y6Y1 1673 aa12.26□□□□□ -0.45
LMO3-216ENST00000537568 DGAT1O75907 488 aa12.25□□□□□ -0.45
LMO3-216ENST00000537568 SF3B2Q13435 895 aaKnown RBP12.25□□□□□ -0.45
LMO3-216ENST00000537568 GLI3P10071 1580 aa12.25□□□□□ -0.45
LMO3-216ENST00000537568 CHD2O14647 1828 aaKnown RBP12.25□□□□□ -0.45
LMO3-216ENST00000537568 ATF3P18847 181 aa12.24□□□□□ -0.45
LMO3-216ENST00000537568 TBC1D2Q9BYX2 928 aa12.24□□□□□ -0.45
LMO3-216ENST00000537568 MYT1Q01538 1121 aa12.23□□□□□ -0.45
LMO3-216ENST00000537568 CFDP1Q9UEE9 299 aaPredicted RBP12.23□□□□□ -0.45
LMO3-216ENST00000537568 BRWD3Q6RI45 1802 aa12.23□□□□□ -0.45
LMO3-216ENST00000537568 MST1RQ04912 1400 aa12.22□□□□□ -0.45
LMO3-216ENST00000537568 PTCH1Q13635 1447 aa12.22□□□□□ -0.45
LMO3-216ENST00000537568 RALGAPBQ86X10 1494 aa12.21□□□□□ -0.45
LMO3-216ENST00000537568 SPHKAPQ2M3C7 1700 aa12.21□□□□□ -0.45
LMO3-216ENST00000537568 A6NJR5 290 aa12.21□□□□□ -0.45
LMO3-216ENST00000537568 TRAK2O60296 914 aa12.21□□□□□ -0.45
LMO3-216ENST00000537568 CCDC82Q8N4S0 544 aa12.21□□□□□ -0.45
LMO3-216ENST00000537568 TOR4AQ9NXH8 423 aa12.21□□□□□ -0.45
LMO3-216ENST00000537568 EFCAB6Q5THR3 1501 aa12.21□□□□□ -0.46
LMO3-216ENST00000537568 CFAP65Q6ZU64 1925 aaKnown RBP12.2□□□□□ -0.46
LMO3-216ENST00000537568 BAG6P46379 1132 aa12.2□□□□□ -0.46
LMO3-216ENST00000537568 NUDT12Q9BQG2 462 aa12.2□□□□□ -0.46
LMO3-216ENST00000537568 NINLQ9Y2I6 1382 aa12.19□□□□□ -0.46
LMO3-216ENST00000537568 MTMR2Q13614 643 aa12.19□□□□□ -0.46
LMO3-216ENST00000537568 DIXDC1Q155Q3 683 aa12.19□□□□□ -0.46
LMO3-216ENST00000537568 RSBN1LQ6PCB5 846 aaPredicted RBP12.19□□□□□ -0.46
LMO3-216ENST00000537568 CYP4X1Q8N118 509 aa12.19□□□□□ -0.46
LMO3-216ENST00000537568 WNT7AO00755 349 aa12.18□□□□□ -0.46
LMO3-216ENST00000537568 PDIA4P13667 645 aaKnown RBP12.18□□□□□ -0.46
LMO3-216ENST00000537568 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
LMO3-216ENST00000537568 PRR7Q8TB68 274 aa12.18□□□□□ -0.46
LMO3-216ENST00000537568 IDI1Q13907 227 aa12.17□□□□□ -0.46
LMO3-216ENST00000537568 MCM6Q14566 821 aa12.17□□□□□ -0.46
LMO3-216ENST00000537568 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
LMO3-216ENST00000537568 MYOM2P54296 1465 aa12.16□□□□□ -0.46
LMO3-216ENST00000537568 GJA5P36382 358 aa12.16□□□□□ -0.46
LMO3-216ENST00000537568 SKOR1P84550 965 aa12.16□□□□□ -0.46
LMO3-216ENST00000537568 PTCRAQ6ISU1 281 aaPredicted RBP12.16□□□□□ -0.46
LMO3-216ENST00000537568 SEPT12Q8IYM1 358 aa12.16□□□□□ -0.46
LMO3-216ENST00000537568 DCCP43146 1447 aa12.16□□□□□ -0.46
LMO3-216ENST00000537568 ARHGAP31Q2M1Z3 1444 aa12.16□□□□□ -0.46
LMO3-216ENST00000537568 SPTLC1O15269 473 aa12.15□□□□□ -0.46
LMO3-216ENST00000537568 MRGPRX2Q96LB1 330 aa12.15□□□□□ -0.46
LMO3-216ENST00000537568 CEP152O94986 1710 aa12.14□□□□□ -0.47
LMO3-216ENST00000537568 DISP2A7MBM2 1401 aa12.14□□□□□ -0.47
LMO3-216ENST00000537568 SPDYE5A6NIY4 337 aa12.14□□□□□ -0.47
LMO3-216ENST00000537568 ST8SIA5O15466 376 aa12.14□□□□□ -0.47
LMO3-216ENST00000537568 CCNYL3P0C7X3 344 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms