RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 LOC102724428A0A0B4J2F2 783 aa21.65■■□□□ 1.06
LPCAT3-206ENST00000537179 CYP27B1O15528 508 aa21.65■■□□□ 1.06
LPCAT3-206ENST00000537179 TATP17735 454 aaPredicted RBP21.65■■□□□ 1.06
LPCAT3-206ENST00000537179 SIK1P57059 783 aa21.65■■□□□ 1.06
LPCAT3-206ENST00000537179 SMG6Q86US8 1419 aaKnown RBP21.64■■□□□ 1.06
LPCAT3-206ENST00000537179 COL5A3P25940 1745 aaPredicted RBP21.64■■□□□ 1.06
LPCAT3-206ENST00000537179 TIAM2Q8IVF5 1701 aa21.64■■□□□ 1.06
LPCAT3-206ENST00000537179 PIGBQ92521 554 aa21.64■■□□□ 1.05
LPCAT3-206ENST00000537179 ITPK1Q13572 414 aa21.63■■□□□ 1.05
LPCAT3-206ENST00000537179 CCDC87Q9NVE4 849 aa21.63■■□□□ 1.05
LPCAT3-206ENST00000537179 TERF2IPQ9NYB0 399 aa21.63■■□□□ 1.05
LPCAT3-206ENST00000537179 KCNA3P22001 575 aa21.62■■□□□ 1.05
LPCAT3-206ENST00000537179 L3MBTL2Q969R5 705 aa21.62■■□□□ 1.05
LPCAT3-206ENST00000537179 DCAF5Q96JK2 942 aa21.62■■□□□ 1.05
LPCAT3-206ENST00000537179 CCDC88AQ3V6T2 1871 aa21.61■■□□□ 1.05
LPCAT3-206ENST00000537179 COG3Q96JB2 828 aa21.61■■□□□ 1.05
LPCAT3-206ENST00000537179 ZNF831Q5JPB2 1677 aa21.6■■□□□ 1.05
LPCAT3-206ENST00000537179 NLGN1Q8N2Q7 840 aa21.59■■□□□ 1.05
LPCAT3-206ENST00000537179 TMF1P82094 1093 aa21.58■■□□□ 1.05
LPCAT3-206ENST00000537179 RRS1Q15050 365 aaKnown RBP21.58■■□□□ 1.05
LPCAT3-206ENST00000537179 ATP6V1AP38606 617 aa21.57■■□□□ 1.04
LPCAT3-206ENST00000537179 PIM2Q9P1W9 311 aa21.57■■□□□ 1.04
LPCAT3-206ENST00000537179 DALRD3Q5D0E6 543 aaKnown RBP21.56■■□□□ 1.04
LPCAT3-206ENST00000537179 MYH14Q7Z406 1995 aaKnown RBP21.56■■□□□ 1.04
LPCAT3-206ENST00000537179 KDM6AO15550 1401 aaPredicted RBP21.55■■□□□ 1.04
LPCAT3-206ENST00000537179 PCDH10Q9P2E7 1040 aa21.55■■□□□ 1.04
LPCAT3-206ENST00000537179 ASAP1Q9ULH1 1129 aa21.55■■□□□ 1.04
LPCAT3-206ENST00000537179 PARP3Q9Y6F1 533 aa21.55■■□□□ 1.04
LPCAT3-206ENST00000537179 KDRP35968 1356 aa21.55■■□□□ 1.04
LPCAT3-206ENST00000537179 ZC3H4Q9UPT8 1303 aaKnown RBP21.55■■□□□ 1.04
LPCAT3-206ENST00000537179 GYS1P13807 737 aa21.54■■□□□ 1.04
LPCAT3-206ENST00000537179 TRAPPC3LQ5T215 181 aa21.54■■□□□ 1.04
LPCAT3-206ENST00000537179 INSRP06213 1382 aa21.53■■□□□ 1.04
LPCAT3-206ENST00000537179 NKX1-1Q15270 411 aaPredicted RBP21.53■■□□□ 1.04
LPCAT3-206ENST00000537179 RTCBQ9Y3I0 505 aaKnown RBP21.53■■□□□ 1.04
LPCAT3-206ENST00000537179 DLEC1Q9Y238 1755 aa21.53■■□□□ 1.04
LPCAT3-206ENST00000537179 KIF20BQ96Q89 1820 aa21.52■■□□□ 1.04
LPCAT3-206ENST00000537179 VEGFAP15692 232 aaPredicted RBP21.52■■□□□ 1.04
LPCAT3-206ENST00000537179 TMOD3Q9NYL9 352 aa21.52■■□□□ 1.04
LPCAT3-206ENST00000537179 FOXN1O15353 648 aa21.51■■□□□ 1.03
LPCAT3-206ENST00000537179 FAM161AQ3B820 660 aa21.51■■□□□ 1.03
LPCAT3-206ENST00000537179 ARHGEF1Q92888 912 aaKnown RBP21.51■■□□□ 1.03
LPCAT3-206ENST00000537179 NCAPD2Q15021 1401 aa21.51■■□□□ 1.03
LPCAT3-206ENST00000537179 RASSF7Q02833 373 aa21.5■■□□□ 1.03
LPCAT3-206ENST00000537179 HSP90AB2PQ58FF8 381 aa21.5■■□□□ 1.03
LPCAT3-206ENST00000537179 GLTPD2A6NH11 291 aa21.49■■□□□ 1.03
LPCAT3-206ENST00000537179 ADRA2BP18089 450 aa21.49■■□□□ 1.03
LPCAT3-206ENST00000537179 PRDM10Q9NQV6 1147 aa21.49■■□□□ 1.03
LPCAT3-206ENST00000537179 MKRN1Q9UHC7 482 aaKnown RBP21.49■■□□□ 1.03
LPCAT3-206ENST00000537179 FLT4P35916 1363 aa21.48■■□□□ 1.03
LPCAT3-206ENST00000537179 VIRMAQ69YN4 1812 aaKnown RBP21.48■■□□□ 1.03
LPCAT3-206ENST00000537179 CHRNA5P30532 468 aa21.48■■□□□ 1.03
LPCAT3-206ENST00000537179 ATG3Q9NT62 314 aa21.47■■□□□ 1.03
LPCAT3-206ENST00000537179 AFDNP55196 1824 aaKnown RBP21.47■■□□□ 1.03
LPCAT3-206ENST00000537179 RFC4P35249 363 aa21.46■■□□□ 1.03
LPCAT3-206ENST00000537179 SLC4A9Q96Q91 983 aa21.46■■□□□ 1.03
LPCAT3-206ENST00000537179 DICER1Q9UPY3 1922 aaKnown RBP21.46■■□□□ 1.03
LPCAT3-206ENST00000537179 ANKRD26Q9UPS8 1709 aa21.46■■□□□ 1.03
LPCAT3-206ENST00000537179 PUS7Q96PZ0 661 aaKnown RBP21.45■■□□□ 1.02
LPCAT3-206ENST00000537179 CREBZFQ9NS37 354 aa21.45■■□□□ 1.02
LPCAT3-206ENST00000537179 CNTNAP4Q9C0A0 1308 aa21.45■■□□□ 1.02
LPCAT3-206ENST00000537179 DDR1Q08345 913 aa21.44■■□□□ 1.02
LPCAT3-206ENST00000537179 ADAMTS7Q9UKP4 1686 aa21.44■■□□□ 1.02
LPCAT3-206ENST00000537179 POTECB2RU33 542 aa21.43■■□□□ 1.02
LPCAT3-206ENST00000537179 LMNB1P20700 586 aa21.43■■□□□ 1.02
LPCAT3-206ENST00000537179 RC3H1Q5TC82 1133 aaKnown RBP21.43■■□□□ 1.02
LPCAT3-206ENST00000537179 SPG7Q9UQ90 795 aa21.43■■□□□ 1.02
LPCAT3-206ENST00000537179 KIF24Q5T7B8 1368 aa21.43■■□□□ 1.02
LPCAT3-206ENST00000537179 RPS6KA4O75676 772 aa21.42■■□□□ 1.02
LPCAT3-206ENST00000537179 CNTNAP1P78357 1384 aa21.42■■□□□ 1.02
LPCAT3-206ENST00000537179 GGNBP2Q9H3C7 697 aa21.42■■□□□ 1.02
LPCAT3-206ENST00000537179 TJP1Q07157 1748 aa21.41■■□□□ 1.02
LPCAT3-206ENST00000537179 CTCFP49711 727 aaPredicted RBP21.41■■□□□ 1.02
LPCAT3-206ENST00000537179 CARD11Q9BXL7 1154 aa21.41■■□□□ 1.02
LPCAT3-206ENST00000537179 NRXN2Q9P2S2 1712 aa21.41■■□□□ 1.02
LPCAT3-206ENST00000537179 FYB1O15117 783 aa21.4■■□□□ 1.02
LPCAT3-206ENST00000537179 FKBP8Q14318 412 aa21.4■■□□□ 1.02
LPCAT3-206ENST00000537179 SRP68Q9UHB9 627 aaKnown RBP21.4■■□□□ 1.02
LPCAT3-206ENST00000537179 PHKG2P15735 406 aa21.39■■□□□ 1.01
LPCAT3-206ENST00000537179 ABHD8Q96I13 439 aa21.39■■□□□ 1.01
LPCAT3-206ENST00000537179 RBM42Q9BTD8 480 aaKnown RBP21.39■■□□□ 1.01
LPCAT3-206ENST00000537179 AIDAQ96BJ3 306 aa21.38■■□□□ 1.01
LPCAT3-206ENST00000537179 SIN3AQ96ST3 1273 aa21.38■■□□□ 1.01
LPCAT3-206ENST00000537179 TONSLQ96HA7 1378 aa21.37■■□□□ 1.01
LPCAT3-206ENST00000537179 USP42Q9H9J4 1324 aaKnown RBP21.37■■□□□ 1.01
LPCAT3-206ENST00000537179 IFNL2Q8IZJ0 200 aa21.37■■□□□ 1.01
LPCAT3-206ENST00000537179 POLRMTO00411 1230 aaKnown RBP21.36■■□□□ 1.01
LPCAT3-206ENST00000537179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.36■■□□□ 1.01
LPCAT3-206ENST00000537179 FER1L6Q2WGJ9 1857 aa21.36■■□□□ 1.01
LPCAT3-206ENST00000537179 LBX1P52954 281 aa21.35■■□□□ 1.01
LPCAT3-206ENST00000537179 CHADLQ6NUI6 762 aa21.35■■□□□ 1.01
LPCAT3-206ENST00000537179 NFKBIEO00221 500 aa21.34■■□□□ 1.01
LPCAT3-206ENST00000537179 EMILIN1Q9Y6C2 1016 aa21.34■■□□□ 1.01
LPCAT3-206ENST00000537179 POTEIP0CG38 1075 aa21.33■■□□□ 1.01
LPCAT3-206ENST00000537179 POTEJP0CG39 1038 aa21.33■■□□□ 1.01
LPCAT3-206ENST00000537179 TNRC18O15417 2968 aaPredicted RBP21.33■■□□□ 1
LPCAT3-206ENST00000537179 MLLT1Q03111 559 aaPredicted RBP21.32■■□□□ 1
LPCAT3-206ENST00000537179 VEGFBP49765 207 aa21.31■■□□□ 1
LPCAT3-206ENST00000537179 WBP1LQ9NX94 342 aa21.31■■□□□ 1
LPCAT3-206ENST00000537179 TM4SF1P30408 202 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms