RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 NEURL4Q96JN8 1562 aa11.13□□□□□ -0.63
CCDC60-203ENST00000536742 TRAK2O60296 914 aa11.13□□□□□ -0.63
CCDC60-203ENST00000536742 SH3BP2P78314 561 aa11.13□□□□□ -0.63
CCDC60-203ENST00000536742 ANKLE2Q86XL3 938 aa11.13□□□□□ -0.63
CCDC60-203ENST00000536742 BAP1Q92560 729 aa11.13□□□□□ -0.63
CCDC60-203ENST00000536742 DIP2CQ9Y2E4 1556 aa11.12□□□□□ -0.63
CCDC60-203ENST00000536742 YY1P25490 414 aa11.12□□□□□ -0.63
CCDC60-203ENST00000536742 LINC01559Q495D7 138 aa11.12□□□□□ -0.63
CCDC60-203ENST00000536742 A2ML1A8K2U0 1454 aa11.12□□□□□ -0.63
CCDC60-203ENST00000536742 DNMT1P26358 1616 aaKnown RBP11.11□□□□□ -0.63
CCDC60-203ENST00000536742 GPR37L1O60883 481 aa11.11□□□□□ -0.63
CCDC60-203ENST00000536742 SMCPP49901 116 aaPredicted RBP11.11□□□□□ -0.63
CCDC60-203ENST00000536742 MEX3CQ5U5Q3 659 aaKnown RBP11.11□□□□□ -0.63
CCDC60-203ENST00000536742 ZNF330Q9Y3S2 320 aaPredicted RBP11.11□□□□□ -0.63
CCDC60-203ENST00000536742 JCADQ9P266 1359 aa11.11□□□□□ -0.63
CCDC60-203ENST00000536742 POTECB2RU33 542 aa11.1□□□□□ -0.63
CCDC60-203ENST00000536742 SOX11P35716 441 aa11.1□□□□□ -0.63
CCDC60-203ENST00000536742 PTK2Q05397 1052 aa11.1□□□□□ -0.63
CCDC60-203ENST00000536742 PLCH2O75038 1416 aa11.09□□□□□ -0.63
CCDC60-203ENST00000536742 CDK13Q14004 1512 aaKnown RBP11.09□□□□□ -0.63
CCDC60-203ENST00000536742 LRP5O75197 1615 aa11.09□□□□□ -0.63
CCDC60-203ENST00000536742 KDM5CP41229 1560 aa11.09□□□□□ -0.63
CCDC60-203ENST00000536742 IRF5Q13568 498 aa11.09□□□□□ -0.63
CCDC60-203ENST00000536742 EFCAB2Q5VUJ9 269 aa11.09□□□□□ -0.63
CCDC60-203ENST00000536742 ZNF511Q8NB15 262 aa11.09□□□□□ -0.63
CCDC60-203ENST00000536742 WASF2Q9Y6W5 498 aa11.09□□□□□ -0.63
CCDC60-203ENST00000536742 CTTNBP2Q8WZ74 1663 aa11.08□□□□□ -0.64
CCDC60-203ENST00000536742 ZBBXA8MT70 800 aa11.08□□□□□ -0.64
CCDC60-203ENST00000536742 MCCD1P59942 119 aaPredicted RBP11.08□□□□□ -0.64
CCDC60-203ENST00000536742 NR1H3Q13133 447 aa11.08□□□□□ -0.64
CCDC60-203ENST00000536742 HPS1Q92902 700 aa11.08□□□□□ -0.64
CCDC60-203ENST00000536742 SPATA31A6Q5VVP1 1343 aa11.08□□□□□ -0.64
CCDC60-203ENST00000536742 MED14O60244 1454 aa11.07□□□□□ -0.64
CCDC60-203ENST00000536742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCDC60-203ENST00000536742 RAPGEF6Q8TEU7 1601 aa11.07□□□□□ -0.64
CCDC60-203ENST00000536742 AFAP1Q8N556 730 aa11.07□□□□□ -0.64
CCDC60-203ENST00000536742 DACH1Q9UI36 760 aa11.07□□□□□ -0.64
CCDC60-203ENST00000536742 NPHP4O75161 1426 aaPredicted RBP11.07□□□□□ -0.64
CCDC60-203ENST00000536742 ATAD2Q6PL18 1390 aa11.06□□□□□ -0.64
CCDC60-203ENST00000536742 SIAH2O43255 324 aa11.06□□□□□ -0.64
CCDC60-203ENST00000536742 VARSP26640 1264 aaKnown RBP11.06□□□□□ -0.64
CCDC60-203ENST00000536742 BPHLQ86WA6 291 aaPredicted RBP11.06□□□□□ -0.64
CCDC60-203ENST00000536742 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
CCDC60-203ENST00000536742 MLH3Q9UHC1 1453 aa11.06□□□□□ -0.64
CCDC60-203ENST00000536742 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
CCDC60-203ENST00000536742 EIF4G2P78344 907 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCDC60-203ENST00000536742 ABCA6Q8N139 1617 aa11.05□□□□□ -0.64
CCDC60-203ENST00000536742 SENP3-EIF4A1A0A087X0R7 540 aa11.04□□□□□ -0.64
CCDC60-203ENST00000536742 C11orf95C9JLR9 678 aaPredicted RBP11.04□□□□□ -0.64
CCDC60-203ENST00000536742 AGERQ15109 404 aa11.04□□□□□ -0.64
CCDC60-203ENST00000536742 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
CCDC60-203ENST00000536742 ZNF775Q96BV0 537 aaPredicted RBP11.04□□□□□ -0.64
CCDC60-203ENST00000536742 DEPDC5O75140 1603 aa11.04□□□□□ -0.64
CCDC60-203ENST00000536742 ROBO1Q9Y6N7 1651 aa11.04□□□□□ -0.64
CCDC60-203ENST00000536742 SH3RF1Q7Z6J0 888 aa11.03□□□□□ -0.64
CCDC60-203ENST00000536742 THEMISQ8N1K5 641 aaPredicted RBP11.03□□□□□ -0.64
CCDC60-203ENST00000536742 ARHGAP9Q9BRR9 750 aa11.03□□□□□ -0.64
CCDC60-203ENST00000536742 FAM174AQ8TBP5 190 aa11.02□□□□□ -0.65
CCDC60-203ENST00000536742 ATP13A2Q9NQ11 1180 aa11.02□□□□□ -0.65
CCDC60-203ENST00000536742 GMPR2Q9P2T1 348 aaKnown RBP11.02□□□□□ -0.65
CCDC60-203ENST00000536742 IQGAP1P46940 1657 aa11.01□□□□□ -0.65
CCDC60-203ENST00000536742 FBXO45P0C2W1 286 aa11.01□□□□□ -0.65
CCDC60-203ENST00000536742 CLTCQ00610 1675 aaKnown RBP11.01□□□□□ -0.65
CCDC60-203ENST00000536742 RGS12O14924 1447 aa11.01□□□□□ -0.65
CCDC60-203ENST00000536742 NUP153P49790 1475 aaKnown RBP11□□□□□ -0.65
CCDC60-203ENST00000536742 LRP6O75581 1613 aa11□□□□□ -0.65
CCDC60-203ENST00000536742 RBM6P78332 1123 aaKnown RBP11□□□□□ -0.65
CCDC60-203ENST00000536742 ZBTB33Q86T24 672 aa11□□□□□ -0.65
CCDC60-203ENST00000536742 SENP2Q9HC62 589 aa11□□□□□ -0.65
CCDC60-203ENST00000536742 CDV3Q9UKY7 258 aaKnown RBP11□□□□□ -0.65
CCDC60-203ENST00000536742 PHLPP1O60346 1717 aa11□□□□□ -0.65
CCDC60-203ENST00000536742 LRRC9Q6ZRR7 1453 aa11□□□□□ -0.65
CCDC60-203ENST00000536742 KDM5DQ9BY66 1539 aa10.99□□□□□ -0.65
CCDC60-203ENST00000536742 VAC14Q08AM6 782 aa10.99□□□□□ -0.65
CCDC60-203ENST00000536742 TLL2Q9Y6L7 1015 aa10.99□□□□□ -0.65
CCDC60-203ENST00000536742 FGD6Q6ZV73 1430 aa10.99□□□□□ -0.65
CCDC60-203ENST00000536742 TRMT44Q8IYL2 757 aaKnown RBP10.98□□□□□ -0.65
CCDC60-203ENST00000536742 MPNDQ8N594 471 aa10.98□□□□□ -0.65
CCDC60-203ENST00000536742 FOXJ1Q92949 421 aa10.98□□□□□ -0.65
CCDC60-203ENST00000536742 C1QTNF2Q9BXJ5 285 aa10.98□□□□□ -0.65
CCDC60-203ENST00000536742 ABCC1P33527 1531 aa10.98□□□□□ -0.65
CCDC60-203ENST00000536742 CAPN5O15484 640 aaPredicted RBP10.97□□□□□ -0.65
CCDC60-203ENST00000536742 SEMA3FQ13275 785 aa10.97□□□□□ -0.65
CCDC60-203ENST00000536742 ARID5BQ14865 1188 aa10.97□□□□□ -0.65
CCDC60-203ENST00000536742 NGLY1Q96IV0 654 aa10.97□□□□□ -0.65
CCDC60-203ENST00000536742 XIRP1Q702N8 1843 aaKnown RBP10.97□□□□□ -0.65
CCDC60-203ENST00000536742 ADAM32Q8TC27 787 aa10.96□□□□□ -0.65
CCDC60-203ENST00000536742 ALG2Q9H553 416 aa10.96□□□□□ -0.65
CCDC60-203ENST00000536742 ZNF777Q9ULD5 760 aaPredicted RBP10.96□□□□□ -0.65
CCDC60-203ENST00000536742 MYO5CQ9NQX4 1742 aa10.95□□□□□ -0.66
CCDC60-203ENST00000536742 KIFC2Q96AC6 838 aa10.95□□□□□ -0.66
CCDC60-203ENST00000536742 OCSTAMPQ9BR26 566 aa10.95□□□□□ -0.66
CCDC60-203ENST00000536742 FAM135AQ9P2D6 1515 aa10.94□□□□□ -0.66
CCDC60-203ENST00000536742 AFF2P51816 1311 aa10.94□□□□□ -0.66
CCDC60-203ENST00000536742 MAGEB6P1A0A0J9YX57 407 aa10.94□□□□□ -0.66
CCDC60-203ENST00000536742 NNTQ13423 1086 aa10.94□□□□□ -0.66
CCDC60-203ENST00000536742 ERFEQ4G0M1 354 aa10.94□□□□□ -0.66
CCDC60-203ENST00000536742 GLMNQ92990 594 aa10.94□□□□□ -0.66
CCDC60-203ENST00000536742 CALR3Q96L12 384 aaKnown RBP10.94□□□□□ -0.66
CCDC60-203ENST00000536742 QTRT2Q9H974 415 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms