RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 BOLA2Q9H3K6 86 aa15.54■□□□□ 0.08
PTPN21-202ENST00000536337 CLCN1P35523 988 aa15.53■□□□□ 0.08
PTPN21-202ENST00000536337 ZNF592Q92610 1267 aa15.53■□□□□ 0.08
PTPN21-202ENST00000536337 YEATS2Q9ULM3 1422 aa15.53■□□□□ 0.08
PTPN21-202ENST00000536337 UNC13BO14795 1591 aa15.53■□□□□ 0.08
PTPN21-202ENST00000536337 PNMA6EA0A0J9YXQ4 647 aa15.53■□□□□ 0.08
PTPN21-202ENST00000536337 CPA1P15085 419 aa15.53■□□□□ 0.08
PTPN21-202ENST00000536337 CHL1O00533 1208 aa15.53■□□□□ 0.08
PTPN21-202ENST00000536337 GNL2Q13823 731 aaKnown RBP15.53■□□□□ 0.08
PTPN21-202ENST00000536337 ESYT1Q9BSJ8 1104 aa15.53■□□□□ 0.08
PTPN21-202ENST00000536337 CYP46A1Q9Y6A2 500 aa15.53■□□□□ 0.08
PTPN21-202ENST00000536337 CHD1O14646 1710 aa15.53■□□□□ 0.08
PTPN21-202ENST00000536337 PLEKHO1Q53GL0 409 aaPredicted RBP15.52■□□□□ 0.08
PTPN21-202ENST00000536337 CCDC39Q9UFE4 941 aa15.52■□□□□ 0.08
PTPN21-202ENST00000536337 ZFYVE16Q7Z3T8 1539 aa15.52■□□□□ 0.08
PTPN21-202ENST00000536337 SF3A1Q15459 793 aaKnown RBP15.52■□□□□ 0.08
PTPN21-202ENST00000536337 CAMK4Q16566 473 aa15.52■□□□□ 0.08
PTPN21-202ENST00000536337 LARP1BQ659C4 914 aaKnown RBP15.52■□□□□ 0.08
PTPN21-202ENST00000536337 KIF1BPQ96EK5 621 aa15.52■□□□□ 0.08
PTPN21-202ENST00000536337 RNF20Q5VTR2 975 aa15.52■□□□□ 0.07
PTPN21-202ENST00000536337 ZCCHC11Q5TAX3 1644 aaKnown RBP15.52■□□□□ 0.07
PTPN21-202ENST00000536337 MADDQ8WXG6 1647 aa15.52■□□□□ 0.07
PTPN21-202ENST00000536337 ZNF830Q96NB3 372 aaPredicted RBP15.51■□□□□ 0.07
PTPN21-202ENST00000536337 THEMISQ8N1K5 641 aaPredicted RBP15.51■□□□□ 0.07
PTPN21-202ENST00000536337 PDRG1Q9NUG6 133 aa15.51■□□□□ 0.07
PTPN21-202ENST00000536337 USP25Q9UHP3 1055 aa15.51■□□□□ 0.07
PTPN21-202ENST00000536337 POGZQ7Z3K3 1410 aa15.51■□□□□ 0.07
PTPN21-202ENST00000536337 CHPF2Q9P2E5 772 aa15.51■□□□□ 0.07
PTPN21-202ENST00000536337 DNAAF4Q8WXU2 420 aa15.5■□□□□ 0.07
PTPN21-202ENST00000536337 E9PCH4 1651 aa15.5■□□□□ 0.07
PTPN21-202ENST00000536337 RHPN1Q8TCX5 695 aa15.5■□□□□ 0.07
PTPN21-202ENST00000536337 PA2G4Q9UQ80 394 aaKnown RBP15.5■□□□□ 0.07
PTPN21-202ENST00000536337 MYOM2P54296 1465 aa15.5■□□□□ 0.07
PTPN21-202ENST00000536337 PLXNC1O60486 1568 aa15.5■□□□□ 0.07
PTPN21-202ENST00000536337 BECN2A8MW95 431 aa15.49■□□□□ 0.07
PTPN21-202ENST00000536337 GOLGA6L6A8MZA4 724 aa15.49■□□□□ 0.07
PTPN21-202ENST00000536337 DDX11Q96FC9 970 aa15.49■□□□□ 0.07
PTPN21-202ENST00000536337 NECAB1Q8N987 351 aa15.49■□□□□ 0.07
PTPN21-202ENST00000536337 ABCC4O15439 1325 aa15.49■□□□□ 0.07
PTPN21-202ENST00000536337 PIP4K2AP48426 406 aaPredicted RBP15.49■□□□□ 0.07
PTPN21-202ENST00000536337 GOLGA6L19H0YKK7 550 aa15.49■□□□□ 0.07
PTPN21-202ENST00000536337 ATP8B2P98198 1209 aa15.49■□□□□ 0.07
PTPN21-202ENST00000536337 LRRC59Q96AG4 307 aaKnown RBP15.49■□□□□ 0.07
PTPN21-202ENST00000536337 RBSNQ9H1K0 784 aa15.49■□□□□ 0.07
PTPN21-202ENST00000536337 TOMM22Q9NS69 142 aa15.48■□□□□ 0.07
PTPN21-202ENST00000536337 TFIP11Q9UBB9 837 aaKnown RBP15.48■□□□□ 0.07
PTPN21-202ENST00000536337 HTATSF1O43719 755 aaKnown RBP15.48■□□□□ 0.07
PTPN21-202ENST00000536337 CCDC85AQ96PX6 553 aaPredicted RBP15.48■□□□□ 0.07
PTPN21-202ENST00000536337 UQCRHLA0A096LP55 91 aa15.47■□□□□ 0.07
PTPN21-202ENST00000536337 UQCRHP07919 91 aa15.47■□□□□ 0.07
PTPN21-202ENST00000536337 CHMLP26374 656 aa15.47■□□□□ 0.07
PTPN21-202ENST00000536337 MAP3K2Q9Y2U5 619 aa15.47■□□□□ 0.07
PTPN21-202ENST00000536337 ZFYVE9O95405 1425 aa15.47■□□□□ 0.07
PTPN21-202ENST00000536337 HCLS1P14317 486 aaPredicted RBP15.47■□□□□ 0.07
PTPN21-202ENST00000536337 CNPY2Q9Y2B0 182 aa15.47■□□□□ 0.07
PTPN21-202ENST00000536337 GLRX3O76003 335 aaKnown RBP15.46■□□□□ 0.07
PTPN21-202ENST00000536337 TRIM5Q9C035 493 aa15.46■□□□□ 0.07
PTPN21-202ENST00000536337 PALD1Q9ULE6 856 aa15.46■□□□□ 0.07
PTPN21-202ENST00000536337 MAP3K4Q9Y6R4 1608 aa15.46■□□□□ 0.07
PTPN21-202ENST00000536337 BLOC1S2Q6QNY1 142 aa15.46■□□□□ 0.07
PTPN21-202ENST00000536337 USP48Q86UV5 1035 aa15.46■□□□□ 0.07
PTPN21-202ENST00000536337 RAB11FIP3O75154 756 aa15.46■□□□□ 0.06
PTPN21-202ENST00000536337 SASS6Q6UVJ0 657 aa15.46■□□□□ 0.06
PTPN21-202ENST00000536337 GIMAP6Q6P9H5 292 aa15.45■□□□□ 0.06
PTPN21-202ENST00000536337 PHF8Q9UPP1 1060 aa15.45■□□□□ 0.06
PTPN21-202ENST00000536337 LIMCH1Q9UPQ0 1083 aa15.45■□□□□ 0.06
PTPN21-202ENST00000536337 APPP05067 770 aa15.45■□□□□ 0.06
PTPN21-202ENST00000536337 CWF19L2Q2TBE0 894 aaKnown RBP15.45■□□□□ 0.06
PTPN21-202ENST00000536337 FMNL2Q96PY5 1086 aa15.45■□□□□ 0.06
PTPN21-202ENST00000536337 METP08581 1390 aa15.45■□□□□ 0.06
PTPN21-202ENST00000536337 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
PTPN21-202ENST00000536337 PSMA5P28066 241 aa15.45■□□□□ 0.06
PTPN21-202ENST00000536337 CKAP2LQ8IYA6 745 aa15.45■□□□□ 0.06
PTPN21-202ENST00000536337 SLC39A6Q13433 755 aa15.44■□□□□ 0.06
PTPN21-202ENST00000536337 WASHC4Q2M389 1173 aa15.44■□□□□ 0.06
PTPN21-202ENST00000536337 KIF1BO60333 1816 aa15.44■□□□□ 0.06
PTPN21-202ENST00000536337 TPM2P07951 284 aa15.44■□□□□ 0.06
PTPN21-202ENST00000536337 NBPF7P0C2Y1 421 aaPredicted RBP15.44■□□□□ 0.06
PTPN21-202ENST00000536337 NCBP3Q53F19 620 aaKnown RBP15.44■□□□□ 0.06
PTPN21-202ENST00000536337 FSD2A1L4K1 749 aa15.44■□□□□ 0.06
PTPN21-202ENST00000536337 LGR6Q9HBX8 967 aa15.44■□□□□ 0.06
PTPN21-202ENST00000536337 LMBRD1Q9NUN5 540 aa15.44■□□□□ 0.06
PTPN21-202ENST00000536337 STX6O43752 255 aa15.43■□□□□ 0.06
PTPN21-202ENST00000536337 GJB2P29033 226 aa15.43■□□□□ 0.06
PTPN21-202ENST00000536337 LRSAM1Q6UWE0 723 aa15.43■□□□□ 0.06
PTPN21-202ENST00000536337 RTL1A6NKG5 1358 aa15.43■□□□□ 0.06
PTPN21-202ENST00000536337 TET3O43151 1660 aa15.42■□□□□ 0.06
PTPN21-202ENST00000536337 ZNF853P0CG23 659 aa15.42■□□□□ 0.06
PTPN21-202ENST00000536337 UNC5CLQ8IV45 518 aa15.42■□□□□ 0.06
PTPN21-202ENST00000536337 ZMYM3Q14202 1370 aa15.42■□□□□ 0.06
PTPN21-202ENST00000536337 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
PTPN21-202ENST00000536337 SPHKAPQ2M3C7 1700 aa15.42■□□□□ 0.06
PTPN21-202ENST00000536337 ATP5J2-PTCD1G3V325 749 aa15.42■□□□□ 0.06
PTPN21-202ENST00000536337 PTCD1O75127 700 aaKnown RBP15.42■□□□□ 0.06
PTPN21-202ENST00000536337 KRT85P78386 507 aa15.42■□□□□ 0.06
PTPN21-202ENST00000536337 ECHDC1Q9NTX5 307 aa15.42■□□□□ 0.06
PTPN21-202ENST00000536337 ABCA6Q8N139 1617 aa15.42■□□□□ 0.06
PTPN21-202ENST00000536337 LTKP29376 864 aa15.42■□□□□ 0.06
PTPN21-202ENST00000536337 PROSER2Q86WR7 435 aaPredicted RBP15.42■□□□□ 0.06
PTPN21-202ENST00000536337 ERC1Q8IUD2 1116 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms