RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 LINC00116Q8NCU8 138 aa19.36■□□□□ 0.69
RTN3P1-201ENST00000536295 KDRP35968 1356 aa19.35■□□□□ 0.69
RTN3P1-201ENST00000536295 HMOX1P09601 288 aa19.35■□□□□ 0.69
RTN3P1-201ENST00000536295 CABP4P57796 275 aa19.35■□□□□ 0.69
RTN3P1-201ENST00000536295 ITPK1Q13572 414 aa19.35■□□□□ 0.69
RTN3P1-201ENST00000536295 AMIGO3Q86WK7 504 aa19.35■□□□□ 0.69
RTN3P1-201ENST00000536295 FLAD1Q8NFF5 587 aa19.35■□□□□ 0.69
RTN3P1-201ENST00000536295 RBM42Q9BTD8 480 aaKnown RBP19.34■□□□□ 0.69
RTN3P1-201ENST00000536295 COL24A1Q17RW2 1714 aa19.34■□□□□ 0.69
RTN3P1-201ENST00000536295 MAP3K5Q99683 1374 aa19.33■□□□□ 0.69
RTN3P1-201ENST00000536295 DIAPH1O60610 1272 aaKnown RBP19.33■□□□□ 0.68
RTN3P1-201ENST00000536295 NPC1L1Q9UHC9 1359 aa19.32■□□□□ 0.68
RTN3P1-201ENST00000536295 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.32■□□□□ 0.68
RTN3P1-201ENST00000536295 GNPATO15228 680 aa19.31■□□□□ 0.68
RTN3P1-201ENST00000536295 NFATC2IPQ8NCF5 419 aa19.3■□□□□ 0.68
RTN3P1-201ENST00000536295 UBR3Q6ZT12 1888 aa19.29■□□□□ 0.68
RTN3P1-201ENST00000536295 SSFA2P28290 1259 aa19.29■□□□□ 0.68
RTN3P1-201ENST00000536295 AKAP4Q5JQC9 854 aa19.29■□□□□ 0.68
RTN3P1-201ENST00000536295 PELP1Q8IZL8 1130 aaKnown RBP19.29■□□□□ 0.68
RTN3P1-201ENST00000536295 NLGN2Q8NFZ4 835 aa19.29■□□□□ 0.68
RTN3P1-201ENST00000536295 SLC4A9Q96Q91 983 aa19.29■□□□□ 0.68
RTN3P1-201ENST00000536295 U2SURPO15042 1029 aaKnown RBP19.28■□□□□ 0.68
RTN3P1-201ENST00000536295 PTCD1O75127 700 aaKnown RBP19.28■□□□□ 0.68
RTN3P1-201ENST00000536295 GPR162Q16538 588 aa19.28■□□□□ 0.68
RTN3P1-201ENST00000536295 MTHFSDQ2M296 383 aaKnown RBP19.26■□□□□ 0.67
RTN3P1-201ENST00000536295 LGR6Q9HBX8 967 aa19.26■□□□□ 0.67
RTN3P1-201ENST00000536295 COL3A1P02461 1466 aaPredicted RBP19.26■□□□□ 0.67
RTN3P1-201ENST00000536295 RTCBQ9Y3I0 505 aaKnown RBP19.24■□□□□ 0.67
RTN3P1-201ENST00000536295 SCN11AQ9UI33 1791 aa19.24■□□□□ 0.67
RTN3P1-201ENST00000536295 RNMTO43148 476 aaKnown RBP19.23■□□□□ 0.67
RTN3P1-201ENST00000536295 SLC52A2Q9HAB3 445 aa19.23■□□□□ 0.67
RTN3P1-201ENST00000536295 TRAPPC3LQ5T215 181 aa19.22■□□□□ 0.67
RTN3P1-201ENST00000536295 CFAP53Q96M91 514 aa19.22■□□□□ 0.67
RTN3P1-201ENST00000536295 CNTNAP4Q9C0A0 1308 aa19.22■□□□□ 0.67
RTN3P1-201ENST00000536295 ZNF831Q5JPB2 1677 aa19.21■□□□□ 0.67
RTN3P1-201ENST00000536295 RC3H1Q5TC82 1133 aaKnown RBP19.21■□□□□ 0.67
RTN3P1-201ENST00000536295 COL5A3P25940 1745 aaPredicted RBP19.2■□□□□ 0.66
RTN3P1-201ENST00000536295 SLC39A6Q13433 755 aa19.2■□□□□ 0.66
RTN3P1-201ENST00000536295 CD2APQ9Y5K6 639 aa19.2■□□□□ 0.66
RTN3P1-201ENST00000536295 UTRNP46939 3433 aa19.19■□□□□ 0.66
RTN3P1-201ENST00000536295 RPS6KA4O75676 772 aa19.19■□□□□ 0.66
RTN3P1-201ENST00000536295 PPP2R1AP30153 589 aa19.19■□□□□ 0.66
RTN3P1-201ENST00000536295 CRKLP46109 303 aaKnown RBP19.19■□□□□ 0.66
RTN3P1-201ENST00000536295 ARHGEF1Q92888 912 aaKnown RBP19.19■□□□□ 0.66
RTN3P1-201ENST00000536295 MRC1P22897 1456 aa19.18■□□□□ 0.66
RTN3P1-201ENST00000536295 RFC4P35249 363 aa19.18■□□□□ 0.66
RTN3P1-201ENST00000536295 MMP10P09238 476 aa19.17■□□□□ 0.66
RTN3P1-201ENST00000536295 YBX3P16989 372 aaKnown RBP eCLIP19.17■□□□□ 0.66
RTN3P1-201ENST00000536295 ADRA2BP18089 450 aa19.17■□□□□ 0.66
RTN3P1-201ENST00000536295 TJP1Q07157 1748 aa19.17■□□□□ 0.66
RTN3P1-201ENST00000536295 PRKAR2BP31323 418 aa19.16■□□□□ 0.66
RTN3P1-201ENST00000536295 DNAJC10Q8IXB1 793 aa19.16■□□□□ 0.66
RTN3P1-201ENST00000536295 GAS2L2Q8NHY3 880 aa19.16■□□□□ 0.66
RTN3P1-201ENST00000536295 WWC3Q9ULE0 1092 aa19.16■□□□□ 0.66
RTN3P1-201ENST00000536295 NUDCQ9Y266 331 aa19.16■□□□□ 0.66
RTN3P1-201ENST00000536295 VIRMAQ69YN4 1812 aaKnown RBP19.16■□□□□ 0.66
RTN3P1-201ENST00000536295 GNAT3A8MTJ3 354 aa19.15■□□□□ 0.66
RTN3P1-201ENST00000536295 MYH14Q7Z406 1995 aaKnown RBP19.15■□□□□ 0.66
RTN3P1-201ENST00000536295 U2AF1L5P0DN76 240 aaPredicted RBP19.14■□□□□ 0.65
RTN3P1-201ENST00000536295 U2AF1Q01081 240 aaKnown RBP eCLIP19.14■□□□□ 0.65
RTN3P1-201ENST00000536295 NLGN1Q8N2Q7 840 aa19.14■□□□□ 0.65
RTN3P1-201ENST00000536295 PHACTR3Q96KR7 559 aa19.14■□□□□ 0.65
RTN3P1-201ENST00000536295 RSPH6AQ9H0K4 717 aa19.14■□□□□ 0.65
RTN3P1-201ENST00000536295 ADAMTS7Q9UKP4 1686 aa19.14■□□□□ 0.65
RTN3P1-201ENST00000536295 CHD4Q14839 1912 aa19.13■□□□□ 0.65
RTN3P1-201ENST00000536295 GYS1P13807 737 aa19.13■□□□□ 0.65
RTN3P1-201ENST00000536295 TEFQ10587 303 aa19.13■□□□□ 0.65
RTN3P1-201ENST00000536295 INTS5Q6P9B9 1019 aaKnown RBP19.13■□□□□ 0.65
RTN3P1-201ENST00000536295 ZNF784Q8NCA9 323 aaPredicted RBP19.13■□□□□ 0.65
RTN3P1-201ENST00000536295 SRP68Q9UHB9 627 aaKnown RBP19.13■□□□□ 0.65
RTN3P1-201ENST00000536295 KCPQ6ZWJ8 1503 aa19.12■□□□□ 0.65
RTN3P1-201ENST00000536295 GRIN3BO60391 1043 aa19.12■□□□□ 0.65
RTN3P1-201ENST00000536295 TTC5Q8N0Z6 440 aa19.12■□□□□ 0.65
RTN3P1-201ENST00000536295 IL17REQ8NFR9 667 aa19.12■□□□□ 0.65
RTN3P1-201ENST00000536295 CCDC87Q9NVE4 849 aa19.12■□□□□ 0.65
RTN3P1-201ENST00000536295 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
RTN3P1-201ENST00000536295 CICQ96RK0 1608 aaPredicted RBP19.11■□□□□ 0.65
RTN3P1-201ENST00000536295 GOLGB1Q14789 3259 aaKnown RBP19.11■□□□□ 0.65
RTN3P1-201ENST00000536295 CYP19A1P11511 503 aaPredicted RBP19.1■□□□□ 0.65
RTN3P1-201ENST00000536295 USP42Q9H9J4 1324 aaKnown RBP19.09■□□□□ 0.65
RTN3P1-201ENST00000536295 PARP3Q9Y6F1 533 aa19.09■□□□□ 0.65
RTN3P1-201ENST00000536295 FKBP8Q14318 412 aa19.08■□□□□ 0.64
RTN3P1-201ENST00000536295 SOS1Q07889 1333 aaPredicted RBP19.07■□□□□ 0.64
RTN3P1-201ENST00000536295 FCHSD2O94868 740 aa19.07■□□□□ 0.64
RTN3P1-201ENST00000536295 VSIG10Q8N0Z9 540 aa19.07■□□□□ 0.64
RTN3P1-201ENST00000536295 ZBTB1Q9Y2K1 713 aa19.07■□□□□ 0.64
RTN3P1-201ENST00000536295 ZPR1O75312 459 aa19.06■□□□□ 0.64
RTN3P1-201ENST00000536295 USPL1Q5W0Q7 1092 aa19.06■□□□□ 0.64
RTN3P1-201ENST00000536295 ZNF790Q6PG37 636 aa19.06■□□□□ 0.64
RTN3P1-201ENST00000536295 ZNF496Q96IT1 587 aaPredicted RBP19.06■□□□□ 0.64
RTN3P1-201ENST00000536295 UBR2Q8IWV8 1755 aa19.06■□□□□ 0.64
RTN3P1-201ENST00000536295 CANXP27824 592 aaKnown RBP19.05■□□□□ 0.64
RTN3P1-201ENST00000536295 C10orf71Q711Q0 1435 aa19.05■□□□□ 0.64
RTN3P1-201ENST00000536295 COL15A1P39059 1388 aa19.05■□□□□ 0.64
RTN3P1-201ENST00000536295 CEMIPQ8WUJ3 1361 aa19.05■□□□□ 0.64
RTN3P1-201ENST00000536295 PXDNLA1KZ92 1463 aa19.04■□□□□ 0.64
RTN3P1-201ENST00000536295 A0A0G2JLW4 131 aa19.04■□□□□ 0.64
RTN3P1-201ENST00000536295 BTBD11A6QL63 1104 aa19.04■□□□□ 0.64
RTN3P1-201ENST00000536295 MCM10Q7L590 875 aa19.04■□□□□ 0.64
RTN3P1-201ENST00000536295 RTF1Q92541 710 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 221.4 ms