RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 ADCY9O60503 1353 aa15.27■□□□□ 0.04
LMO3-213ENST00000536172 ERVV-2B6SEH9 535 aa15.27■□□□□ 0.04
LMO3-213ENST00000536172 GNPATO15228 680 aa15.27■□□□□ 0.04
LMO3-213ENST00000536172 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.04
LMO3-213ENST00000536172 EIF4A2Q14240 407 aaKnown RBP15.26■□□□□ 0.03
LMO3-213ENST00000536172 DCAF5Q96JK2 942 aa15.26■□□□□ 0.03
LMO3-213ENST00000536172 ATG3Q9NT62 314 aa15.26■□□□□ 0.03
LMO3-213ENST00000536172 ITPK1Q13572 414 aa15.25■□□□□ 0.03
LMO3-213ENST00000536172 AMOTQ4VCS5 1084 aa15.25■□□□□ 0.03
LMO3-213ENST00000536172 RC3H1Q5TC82 1133 aaKnown RBP15.25■□□□□ 0.03
LMO3-213ENST00000536172 NLGN1Q8N2Q7 840 aa15.25■□□□□ 0.03
LMO3-213ENST00000536172 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
LMO3-213ENST00000536172 COL5A3P25940 1745 aaPredicted RBP15.25■□□□□ 0.03
LMO3-213ENST00000536172 KDRP35968 1356 aa15.24■□□□□ 0.03
LMO3-213ENST00000536172 PLEKHO1Q53GL0 409 aaPredicted RBP15.24■□□□□ 0.03
LMO3-213ENST00000536172 TRAPPC3LQ5T215 181 aa15.24■□□□□ 0.03
LMO3-213ENST00000536172 CICQ96RK0 1608 aaPredicted RBP15.24■□□□□ 0.03
LMO3-213ENST00000536172 TGFB2P61812 414 aa15.23■□□□□ 0.03
LMO3-213ENST00000536172 CNTNAP4Q9C0A0 1308 aa15.22■□□□□ 0.03
LMO3-213ENST00000536172 MMP10P09238 476 aa15.22■□□□□ 0.03
LMO3-213ENST00000536172 TNNT2P45379 298 aaPredicted RBP15.22■□□□□ 0.03
LMO3-213ENST00000536172 EIF4G2P78344 907 aaKnown RBP eCLIP15.22■□□□□ 0.03
LMO3-213ENST00000536172 POLR3GLQ9BT43 218 aa15.22■□□□□ 0.03
LMO3-213ENST00000536172 SMIM5Q71RC9 77 aa15.21■□□□□ 0.03
LMO3-213ENST00000536172 KIAA1551Q9HCM1 1747 aa15.2■□□□□ 0.02
LMO3-213ENST00000536172 CABP4P57796 275 aa15.2■□□□□ 0.02
LMO3-213ENST00000536172 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
LMO3-213ENST00000536172 N4BP2Q86UW6 1770 aaPredicted RBP15.2■□□□□ 0.02
LMO3-213ENST00000536172 C4AP0C0L4 1744 aa15.2■□□□□ 0.02
LMO3-213ENST00000536172 BRCA1P38398 1863 aaKnown RBP15.19■□□□□ 0.02
LMO3-213ENST00000536172 MYH14Q7Z406 1995 aaKnown RBP15.19■□□□□ 0.02
LMO3-213ENST00000536172 RPS6KA4O75676 772 aa15.19■□□□□ 0.02
LMO3-213ENST00000536172 HSPA6P17066 643 aa15.19■□□□□ 0.02
LMO3-213ENST00000536172 RFC4P35249 363 aa15.19■□□□□ 0.02
LMO3-213ENST00000536172 C1orf141Q5JVX7 400 aa15.19■□□□□ 0.02
LMO3-213ENST00000536172 ZNF530Q6P9A1 599 aaPredicted RBP15.19■□□□□ 0.02
LMO3-213ENST00000536172 PANK3Q9H999 370 aa15.19■□□□□ 0.02
LMO3-213ENST00000536172 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
LMO3-213ENST00000536172 PXDNLA1KZ92 1463 aa15.19■□□□□ 0.02
LMO3-213ENST00000536172 C10orf71Q711Q0 1435 aa15.18■□□□□ 0.02
LMO3-213ENST00000536172 KCNA4P22459 653 aa15.18■□□□□ 0.02
LMO3-213ENST00000536172 MTHFSP49914 203 aa15.18■□□□□ 0.02
LMO3-213ENST00000536172 ARHGEF1Q92888 912 aaKnown RBP15.18■□□□□ 0.02
LMO3-213ENST00000536172 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
LMO3-213ENST00000536172 ARFGEF1Q9Y6D6 1849 aa15.17■□□□□ 0.02
LMO3-213ENST00000536172 SCN11AQ9UI33 1791 aa15.17■□□□□ 0.02
LMO3-213ENST00000536172 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
LMO3-213ENST00000536172 ZNF526Q8TF50 670 aaPredicted RBP15.17■□□□□ 0.02
LMO3-213ENST00000536172 SLC4A9Q96Q91 983 aa15.17■□□□□ 0.02
LMO3-213ENST00000536172 PARP3Q9Y6F1 533 aa15.17■□□□□ 0.02
LMO3-213ENST00000536172 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
LMO3-213ENST00000536172 GYS1P13807 737 aa15.16■□□□□ 0.02
LMO3-213ENST00000536172 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
LMO3-213ENST00000536172 BCS1LQ9Y276 419 aa15.15■□□□□ 0.02
LMO3-213ENST00000536172 A0A0G2JLW4 131 aa15.14■□□□□ 0.01
LMO3-213ENST00000536172 HSPA5P11021 654 aaKnown RBP15.14■□□□□ 0.01
LMO3-213ENST00000536172 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
LMO3-213ENST00000536172 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
LMO3-213ENST00000536172 KIF3CO14782 793 aa15.13■□□□□ 0.01
LMO3-213ENST00000536172 PTCD1O75127 700 aaKnown RBP15.13■□□□□ 0.01
LMO3-213ENST00000536172 IFFO2Q5TF58 517 aa15.13■□□□□ 0.01
LMO3-213ENST00000536172 SULT6B1Q6IMI4 303 aa15.13■□□□□ 0.01
LMO3-213ENST00000536172 NFATC2IPQ8NCF5 419 aa15.13■□□□□ 0.01
LMO3-213ENST00000536172 VIRMAQ69YN4 1812 aaKnown RBP15.13■□□□□ 0.01
LMO3-213ENST00000536172 TJP1Q07157 1748 aa15.12■□□□□ 0.01
LMO3-213ENST00000536172 TOMM70O94826 608 aa15.12■□□□□ 0.01
LMO3-213ENST00000536172 FCHSD2O94868 740 aa15.12■□□□□ 0.01
LMO3-213ENST00000536172 DPEP1P16444 411 aa15.12■□□□□ 0.01
LMO3-213ENST00000536172 CRKLP46109 303 aaKnown RBP15.12■□□□□ 0.01
LMO3-213ENST00000536172 ARHGAP27Q6ZUM4 889 aa15.12■□□□□ 0.01
LMO3-213ENST00000536172 AKAP4Q5JQC9 854 aa15.11■□□□□ 0.01
LMO3-213ENST00000536172 AEBP1Q8IUX7 1158 aa15.11■□□□□ 0.01
LMO3-213ENST00000536172 PIM2Q9P1W9 311 aa15.11■□□□□ 0.01
LMO3-213ENST00000536172 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
LMO3-213ENST00000536172 IL13P35225 146 aa15.1■□□□□ 0.01
LMO3-213ENST00000536172 APLP1P51693 650 aa15.1■□□□□ 0.01
LMO3-213ENST00000536172 ZPR1O75312 459 aa15.08■□□□□ 0
LMO3-213ENST00000536172 KCNA3P22001 575 aa15.08■□□□□ 0
LMO3-213ENST00000536172 DALRD3Q5D0E6 543 aaKnown RBP15.08■□□□□ 0
LMO3-213ENST00000536172 SLC52A2Q9HAB3 445 aa15.08■□□□□ 0
LMO3-213ENST00000536172 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
LMO3-213ENST00000536172 MRC1P22897 1456 aa15.08■□□□□ 0
LMO3-213ENST00000536172 FKBP8Q14318 412 aa15.07■□□□□ 0
LMO3-213ENST00000536172 INTS5Q6P9B9 1019 aaKnown RBP15.07■□□□□ 0
LMO3-213ENST00000536172 SBF1O95248 1867 aa15.07■□□□□ 0
LMO3-213ENST00000536172 AMER1Q5JTC6 1135 aaPredicted RBP15.06■□□□□ 0
LMO3-213ENST00000536172 SRP68Q9UHB9 627 aaKnown RBP15.06■□□□□ 0
LMO3-213ENST00000536172 KDM2BQ8NHM5 1336 aa15.06■□□□□ 0
LMO3-213ENST00000536172 TM4SF1P30408 202 aa15.05■□□□□ -0
LMO3-213ENST00000536172 DDR1Q08345 913 aa15.05■□□□□ -0
LMO3-213ENST00000536172 C9orf131Q5VYM1 1079 aa15.05■□□□□ -0
LMO3-213ENST00000536172 VSIG10Q8N0Z9 540 aa15.05■□□□□ -0
LMO3-213ENST00000536172 AFDNP55196 1824 aaKnown RBP15.04■□□□□ -0
LMO3-213ENST00000536172 TNRC6CQ9HCJ0 1690 aaKnown RBP15.04■□□□□ -0
LMO3-213ENST00000536172 SOS1Q07889 1333 aaPredicted RBP15.04■□□□□ -0
LMO3-213ENST00000536172 POLRMTO00411 1230 aaKnown RBP15.04■□□□□ -0
LMO3-213ENST00000536172 C16orf71Q8IYS4 520 aaPredicted RBP15.04■□□□□ -0
LMO3-213ENST00000536172 RBM46Q8TBY0 533 aaKnown RBP15.04■□□□□ -0
LMO3-213ENST00000536172 UBR2Q8IWV8 1755 aa15.03■□□□□ -0
LMO3-213ENST00000536172 DLEC1Q9Y238 1755 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms