RNA–Protein interactions for RNA: ENST00000535954.1

C2CD3-209, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-209ENST00000535954 ZNF831Q5JPB2 1677 aa12.03□□□□□ -0.48
C2CD3-209ENST00000535954 MYH14Q7Z406 1995 aaKnown RBP12.03□□□□□ -0.48
C2CD3-209ENST00000535954 HMOX1P09601 288 aa12.03□□□□□ -0.48
C2CD3-209ENST00000535954 ZNF530Q6P9A1 599 aaPredicted RBP12.03□□□□□ -0.48
C2CD3-209ENST00000535954 ARXQ96QS3 562 aa12.03□□□□□ -0.48
C2CD3-209ENST00000535954 LGR6Q9HBX8 967 aa12.03□□□□□ -0.48
C2CD3-209ENST00000535954 DIAPH1O60610 1272 aaKnown RBP12.02□□□□□ -0.49
C2CD3-209ENST00000535954 HSP90AB1P08238 724 aaKnown RBP12.02□□□□□ -0.49
C2CD3-209ENST00000535954 MTHFSDQ2M296 383 aaKnown RBP12.02□□□□□ -0.49
C2CD3-209ENST00000535954 NFATC2IPQ8NCF5 419 aa12.02□□□□□ -0.49
C2CD3-209ENST00000535954 ADAMTS7Q9UKP4 1686 aa12.02□□□□□ -0.49
C2CD3-209ENST00000535954 MAP3K5Q99683 1374 aa12.02□□□□□ -0.49
C2CD3-209ENST00000535954 AKAP4Q5JQC9 854 aa12.01□□□□□ -0.49
C2CD3-209ENST00000535954 MSH5O43196 834 aa12□□□□□ -0.49
C2CD3-209ENST00000535954 PPP2R1AP30153 589 aa12□□□□□ -0.49
C2CD3-209ENST00000535954 ATP6V1AP38606 617 aa12□□□□□ -0.49
C2CD3-209ENST00000535954 CNGB1Q14028 1251 aaPredicted RBP12□□□□□ -0.49
C2CD3-209ENST00000535954 COL5A3P25940 1745 aaPredicted RBP12□□□□□ -0.49
C2CD3-209ENST00000535954 CABP4P57796 275 aa11.99□□□□□ -0.49
C2CD3-209ENST00000535954 FLAD1Q8NFF5 587 aa11.99□□□□□ -0.49
C2CD3-209ENST00000535954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.98□□□□□ -0.49
C2CD3-209ENST00000535954 RNMTO43148 476 aaKnown RBP11.98□□□□□ -0.49
C2CD3-209ENST00000535954 PHACTR3Q96KR7 559 aa11.98□□□□□ -0.49
C2CD3-209ENST00000535954 HMGB2P26583 209 aaKnown RBP11.97□□□□□ -0.49
C2CD3-209ENST00000535954 C1orf141Q5JVX7 400 aa11.97□□□□□ -0.49
C2CD3-209ENST00000535954 RC3H1Q5TC82 1133 aaKnown RBP11.97□□□□□ -0.49
C2CD3-209ENST00000535954 IL17REQ8NFR9 667 aa11.97□□□□□ -0.49
C2CD3-209ENST00000535954 SLC52A2Q9HAB3 445 aa11.97□□□□□ -0.49
C2CD3-209ENST00000535954 TJP1Q07157 1748 aa11.97□□□□□ -0.49
C2CD3-209ENST00000535954 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
C2CD3-209ENST00000535954 MRC1P22897 1456 aa11.96□□□□□ -0.49
C2CD3-209ENST00000535954 SSFA2P28290 1259 aa11.96□□□□□ -0.49
C2CD3-209ENST00000535954 MSL1Q68DK7 614 aa11.96□□□□□ -0.49
C2CD3-209ENST00000535954 NLGN2Q8NFZ4 835 aa11.96□□□□□ -0.49
C2CD3-209ENST00000535954 AK7Q96M32 723 aa11.96□□□□□ -0.49
C2CD3-209ENST00000535954 RBM42Q9BTD8 480 aaKnown RBP11.96□□□□□ -0.49
C2CD3-209ENST00000535954 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.49
C2CD3-209ENST00000535954 POLD1P28340 1107 aa11.95□□□□□ -0.5
C2CD3-209ENST00000535954 ARHGEF1Q92888 912 aaKnown RBP11.95□□□□□ -0.5
C2CD3-209ENST00000535954 SIPA1L3O60292 1781 aaPredicted RBP11.95□□□□□ -0.5
C2CD3-209ENST00000535954 CNTNAP4Q9C0A0 1308 aa11.94□□□□□ -0.5
C2CD3-209ENST00000535954 U2SURPO15042 1029 aaKnown RBP11.94□□□□□ -0.5
C2CD3-209ENST00000535954 GNPATO15228 680 aa11.94□□□□□ -0.5
C2CD3-209ENST00000535954 PTCD1O75127 700 aaKnown RBP11.94□□□□□ -0.5
C2CD3-209ENST00000535954 RPS6KA4O75676 772 aa11.94□□□□□ -0.5
C2CD3-209ENST00000535954 PHF14O94880 888 aa11.94□□□□□ -0.5
C2CD3-209ENST00000535954 SLC39A6Q13433 755 aa11.94□□□□□ -0.5
C2CD3-209ENST00000535954 INTS5Q6P9B9 1019 aaKnown RBP11.94□□□□□ -0.5
C2CD3-209ENST00000535954 KCPQ6ZWJ8 1503 aa11.94□□□□□ -0.5
C2CD3-209ENST00000535954 UBR2Q8IWV8 1755 aa11.93□□□□□ -0.5
C2CD3-209ENST00000535954 DCAF8L1A6NGE4 600 aa11.93□□□□□ -0.5
C2CD3-209ENST00000535954 CHD4Q14839 1912 aa11.92□□□□□ -0.5
C2CD3-209ENST00000535954 CRKLP46109 303 aaKnown RBP11.92□□□□□ -0.5
C2CD3-209ENST00000535954 TRAPPC3LQ5T215 181 aa11.92□□□□□ -0.5
C2CD3-209ENST00000535954 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
C2CD3-209ENST00000535954 GNAT3A8MTJ3 354 aa11.91□□□□□ -0.5
C2CD3-209ENST00000535954 FCHSD2O94868 740 aa11.91□□□□□ -0.5
C2CD3-209ENST00000535954 CYP19A1P11511 503 aaPredicted RBP11.91□□□□□ -0.5
C2CD3-209ENST00000535954 GYS1P13807 737 aa11.91□□□□□ -0.5
C2CD3-209ENST00000535954 PRKAR2BP31323 418 aa11.91□□□□□ -0.5
C2CD3-209ENST00000535954 DNAJC10Q8IXB1 793 aa11.91□□□□□ -0.5
C2CD3-209ENST00000535954 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
C2CD3-209ENST00000535954 CD2APQ9Y5K6 639 aa11.91□□□□□ -0.5
C2CD3-209ENST00000535954 C4AP0C0L4 1744 aa11.91□□□□□ -0.5
C2CD3-209ENST00000535954 YBX3P16989 372 aaKnown RBP eCLIP11.9□□□□□ -0.5
C2CD3-209ENST00000535954 GAS2L2Q8NHY3 880 aa11.9□□□□□ -0.5
C2CD3-209ENST00000535954 KIF13BQ9NQT8 1826 aa11.9□□□□□ -0.5
C2CD3-209ENST00000535954 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
C2CD3-209ENST00000535954 KCNQ3O43525 872 aa11.89□□□□□ -0.51
C2CD3-209ENST00000535954 YY1P25490 414 aa11.89□□□□□ -0.51
C2CD3-209ENST00000535954 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
C2CD3-209ENST00000535954 VSIG10Q8N0Z9 540 aa11.89□□□□□ -0.51
C2CD3-209ENST00000535954 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
C2CD3-209ENST00000535954 PLEKHF1Q96S99 279 aa11.89□□□□□ -0.51
C2CD3-209ENST00000535954 U2AF1L5P0DN76 240 aaPredicted RBP11.88□□□□□ -0.51
C2CD3-209ENST00000535954 U2AF1Q01081 240 aaKnown RBP eCLIP11.88□□□□□ -0.51
C2CD3-209ENST00000535954 SRP68Q9UHB9 627 aaKnown RBP11.88□□□□□ -0.51
C2CD3-209ENST00000535954 DLG5Q8TDM6 1919 aa11.88□□□□□ -0.51
C2CD3-209ENST00000535954 MMP10P09238 476 aa11.87□□□□□ -0.51
C2CD3-209ENST00000535954 KCNA4P22459 653 aa11.87□□□□□ -0.51
C2CD3-209ENST00000535954 TM4SF1P30408 202 aa11.87□□□□□ -0.51
C2CD3-209ENST00000535954 DDX10Q13206 875 aaKnown RBP11.87□□□□□ -0.51
C2CD3-209ENST00000535954 ZNF790Q6PG37 636 aa11.87□□□□□ -0.51
C2CD3-209ENST00000535954 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
C2CD3-209ENST00000535954 NLGN1Q8N2Q7 840 aa11.87□□□□□ -0.51
C2CD3-209ENST00000535954 ZNF496Q96IT1 587 aaPredicted RBP11.87□□□□□ -0.51
C2CD3-209ENST00000535954 NUDCQ9Y266 331 aa11.87□□□□□ -0.51
C2CD3-209ENST00000535954 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
C2CD3-209ENST00000535954 FKBP8Q14318 412 aa11.86□□□□□ -0.51
C2CD3-209ENST00000535954 GPR162Q16538 588 aa11.86□□□□□ -0.51
C2CD3-209ENST00000535954 BCL2L12Q9HB09 334 aa11.86□□□□□ -0.51
C2CD3-209ENST00000535954 CCDC87Q9NVE4 849 aa11.86□□□□□ -0.51
C2CD3-209ENST00000535954 ZBTB1Q9Y2K1 713 aa11.86□□□□□ -0.51
C2CD3-209ENST00000535954 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
C2CD3-209ENST00000535954 KCNA3P22001 575 aa11.85□□□□□ -0.51
C2CD3-209ENST00000535954 RFC4P35249 363 aa11.85□□□□□ -0.51
C2CD3-209ENST00000535954 EIF5P55010 431 aaKnown RBP11.85□□□□□ -0.51
C2CD3-209ENST00000535954 DCTN1Q14203 1278 aa11.85□□□□□ -0.51
C2CD3-209ENST00000535954 MCM10Q7L590 875 aa11.85□□□□□ -0.51
C2CD3-209ENST00000535954 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms