RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
UBE3B-205ENST00000535900 SPG7Q9UQ90 795 aa14.25□□□□□ -0.13
UBE3B-205ENST00000535900 U2SURPO15042 1029 aaKnown RBP14.24□□□□□ -0.13
UBE3B-205ENST00000535900 NEFMP07197 916 aa14.24□□□□□ -0.13
UBE3B-205ENST00000535900 HMGB2P26583 209 aaKnown RBP14.24□□□□□ -0.13
UBE3B-205ENST00000535900 GPR162Q16538 588 aa14.24□□□□□ -0.13
UBE3B-205ENST00000535900 PLEKHG2Q9H7P9 1386 aa14.23□□□□□ -0.13
UBE3B-205ENST00000535900 MSL1Q68DK7 614 aa14.23□□□□□ -0.13
UBE3B-205ENST00000535900 SMARCC1Q92922 1105 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-205ENST00000535900 RUNDC1Q96C34 613 aa14.23□□□□□ -0.13
UBE3B-205ENST00000535900 AK7Q96M32 723 aa14.23□□□□□ -0.13
UBE3B-205ENST00000535900 IGSF1Q8N6C5 1336 aa14.22□□□□□ -0.13
UBE3B-205ENST00000535900 COL23A1Q86Y22 540 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-205ENST00000535900 EYA1Q99502 592 aa14.22□□□□□ -0.13
UBE3B-205ENST00000535900 UBR3Q6ZT12 1888 aa14.22□□□□□ -0.13
UBE3B-205ENST00000535900 KDRP35968 1356 aa14.22□□□□□ -0.13
UBE3B-205ENST00000535900 YTHDC1Q96MU7 727 aaKnown RBP14.21□□□□□ -0.13
UBE3B-205ENST00000535900 TMOD3Q9NYL9 352 aa14.21□□□□□ -0.13
UBE3B-205ENST00000535900 ZNF784Q8NCA9 323 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-205ENST00000535900 FLAD1Q8NFF5 587 aa14.2□□□□□ -0.14
UBE3B-205ENST00000535900 NLGN2Q8NFZ4 835 aa14.2□□□□□ -0.14
UBE3B-205ENST00000535900 RSPH6AQ9H0K4 717 aa14.2□□□□□ -0.14
UBE3B-205ENST00000535900 UTRNP46939 3433 aa14.2□□□□□ -0.14
UBE3B-205ENST00000535900 MAPK8IP3Q9UPT6 1336 aa14.19□□□□□ -0.14
UBE3B-205ENST00000535900 PHF14O94880 888 aa14.19□□□□□ -0.14
UBE3B-205ENST00000535900 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
UBE3B-205ENST00000535900 IFNL2Q8IZJ0 200 aa14.19□□□□□ -0.14
UBE3B-205ENST00000535900 PIGBQ92521 554 aa14.19□□□□□ -0.14
UBE3B-205ENST00000535900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.14
UBE3B-205ENST00000535900 ZBED9Q6R2W3 1325 aa14.18□□□□□ -0.14
UBE3B-205ENST00000535900 PHKG2P15735 406 aa14.18□□□□□ -0.14
UBE3B-205ENST00000535900 NKX1-1Q15270 411 aaPredicted RBP14.18□□□□□ -0.14
UBE3B-205ENST00000535900 PLEKHF1Q96S99 279 aa14.18□□□□□ -0.14
UBE3B-205ENST00000535900 SULT6B1Q6IMI4 303 aa14.17□□□□□ -0.14
UBE3B-205ENST00000535900 LOC102724428A0A0B4J2F2 783 aa14.16□□□□□ -0.14
UBE3B-205ENST00000535900 PRKAR2BP31323 418 aa14.16□□□□□ -0.14
UBE3B-205ENST00000535900 SIK1P57059 783 aa14.16□□□□□ -0.14
UBE3B-205ENST00000535900 CCDC27Q2M243 656 aa14.16□□□□□ -0.14
UBE3B-205ENST00000535900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.15□□□□□ -0.14
UBE3B-205ENST00000535900 SSFA2P28290 1259 aa14.15□□□□□ -0.14
UBE3B-205ENST00000535900 LINC00116Q8NCU8 138 aa14.15□□□□□ -0.14
UBE3B-205ENST00000535900 COL5A3P25940 1745 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-205ENST00000535900 APAF1O14727 1248 aa14.14□□□□□ -0.15
UBE3B-205ENST00000535900 GNPATO15228 680 aa14.14□□□□□ -0.15
UBE3B-205ENST00000535900 HMOX1P09601 288 aa14.14□□□□□ -0.15
UBE3B-205ENST00000535900 LMOD3Q0VAK6 560 aa14.14□□□□□ -0.15
UBE3B-205ENST00000535900 CCDC146Q8IYE0 955 aa14.14□□□□□ -0.15
UBE3B-205ENST00000535900 ASAP1Q9ULH1 1129 aa14.14□□□□□ -0.15
UBE3B-205ENST00000535900 ZNF831Q5JPB2 1677 aa14.14□□□□□ -0.15
UBE3B-205ENST00000535900 HSP90AB1P08238 724 aaKnown RBP14.13□□□□□ -0.15
UBE3B-205ENST00000535900 ATP6V1AP38606 617 aa14.13□□□□□ -0.15
UBE3B-205ENST00000535900 AMOTQ4VCS5 1084 aa14.13□□□□□ -0.15
UBE3B-205ENST00000535900 ZNF530Q6P9A1 599 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-205ENST00000535900 GAS2L2Q8NHY3 880 aa14.13□□□□□ -0.15
UBE3B-205ENST00000535900 KDM6AO15550 1401 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-205ENST00000535900 GRIN3BO60391 1043 aa14.12□□□□□ -0.15
UBE3B-205ENST00000535900 YBX3P16989 372 aaKnown RBP eCLIP14.12□□□□□ -0.15
UBE3B-205ENST00000535900 TMPOP42166 694 aaKnown RBP14.12□□□□□ -0.15
UBE3B-205ENST00000535900 NFE2L2Q16236 605 aa14.12□□□□□ -0.15
UBE3B-205ENST00000535900 PLEKHO1Q53GL0 409 aaPredicted RBP14.12□□□□□ -0.15
UBE3B-205ENST00000535900 AMIGO3Q86WK7 504 aa14.12□□□□□ -0.15
UBE3B-205ENST00000535900 AEBP1Q8IUX7 1158 aa14.12□□□□□ -0.15
UBE3B-205ENST00000535900 CD2APQ9Y5K6 639 aa14.12□□□□□ -0.15
UBE3B-205ENST00000535900 ITPK1Q13572 414 aa14.11□□□□□ -0.15
UBE3B-205ENST00000535900 C1orf141Q5JVX7 400 aa14.11□□□□□ -0.15
UBE3B-205ENST00000535900 SMIM5Q71RC9 77 aa14.11□□□□□ -0.15
UBE3B-205ENST00000535900 DCAF5Q96JK2 942 aa14.11□□□□□ -0.15
UBE3B-205ENST00000535900 ATG3Q9NT62 314 aa14.11□□□□□ -0.15
UBE3B-205ENST00000535900 C4AP0C0L4 1744 aa14.1□□□□□ -0.15
UBE3B-205ENST00000535900 HTATSF1O43719 755 aaKnown RBP14.1□□□□□ -0.15
UBE3B-205ENST00000535900 CALD1Q05682 793 aaKnown RBP14.1□□□□□ -0.15
UBE3B-205ENST00000535900 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
UBE3B-205ENST00000535900 CICQ96RK0 1608 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-205ENST00000535900 ERVV-2B6SEH9 535 aa14.09□□□□□ -0.15
UBE3B-205ENST00000535900 GIGYF1O75420 1035 aaPredicted RBP14.09□□□□□ -0.15
UBE3B-205ENST00000535900 WDR63Q8IWG1 891 aa14.09□□□□□ -0.15
UBE3B-205ENST00000535900 PHACTR3Q96KR7 559 aa14.09□□□□□ -0.15
UBE3B-205ENST00000535900 ZNF521Q96K83 1311 aa14.09□□□□□ -0.15
UBE3B-205ENST00000535900 SCN11AQ9UI33 1791 aa14.09□□□□□ -0.15
UBE3B-205ENST00000535900 GOLGB1Q14789 3259 aaKnown RBP14.08□□□□□ -0.16
UBE3B-205ENST00000535900 TJP1Q07157 1748 aa14.08□□□□□ -0.16
UBE3B-205ENST00000535900 RIPK4P57078 832 aa14.08□□□□□ -0.16
UBE3B-205ENST00000535900 CABP4P57796 275 aa14.08□□□□□ -0.16
UBE3B-205ENST00000535900 RTCBQ9Y3I0 505 aaKnown RBP14.08□□□□□ -0.16
UBE3B-205ENST00000535900 SENP3-EIF4A1A0A087X0R7 540 aa14.07□□□□□ -0.16
UBE3B-205ENST00000535900 WWC1Q8IX03 1113 aa14.07□□□□□ -0.16
UBE3B-205ENST00000535900 WWC3Q9ULE0 1092 aa14.07□□□□□ -0.16
UBE3B-205ENST00000535900 IL16Q14005 1332 aa14.07□□□□□ -0.16
UBE3B-205ENST00000535900 ATP10DQ9P241 1426 aa14.07□□□□□ -0.16
UBE3B-205ENST00000535900 KIF13BQ9NQT8 1826 aa14.06□□□□□ -0.16
UBE3B-205ENST00000535900 C1QTNF8P60827 252 aa14.06□□□□□ -0.16
UBE3B-205ENST00000535900 GOLGA2Q08379 1002 aa14.06□□□□□ -0.16
UBE3B-205ENST00000535900 CNTNAP4Q9C0A0 1308 aa14.06□□□□□ -0.16
UBE3B-205ENST00000535900 VIRMAQ69YN4 1812 aaKnown RBP14.06□□□□□ -0.16
UBE3B-205ENST00000535900 KIAA1551Q9HCM1 1747 aa14.05□□□□□ -0.16
UBE3B-205ENST00000535900 MMP10P09238 476 aa14.05□□□□□ -0.16
UBE3B-205ENST00000535900 MTHFSDQ2M296 383 aaKnown RBP14.05□□□□□ -0.16
UBE3B-205ENST00000535900 MRC1P22897 1456 aa14.05□□□□□ -0.16
UBE3B-205ENST00000535900 GNAT3A8MTJ3 354 aa14.04□□□□□ -0.16
UBE3B-205ENST00000535900 E9PSI1 815 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms