RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 GAS2L2Q8NHY3 880 aa11.68□□□□□ -0.54
CD4-204ENST00000535707 BCL9O00512 1426 aa11.68□□□□□ -0.54
CD4-204ENST00000535707 PCDH11XQ9BZA7 1347 aa11.67□□□□□ -0.54
CD4-204ENST00000535707 PCDH11YQ9BZA8 1340 aa11.67□□□□□ -0.54
CD4-204ENST00000535707 SHANK3Q9BYB0 1731 aa11.67□□□□□ -0.54
CD4-204ENST00000535707 EXOC5O00471 708 aa11.67□□□□□ -0.54
CD4-204ENST00000535707 HTATSF1O43719 755 aaKnown RBP11.67□□□□□ -0.54
CD4-204ENST00000535707 NEUROD2Q15784 382 aa11.67□□□□□ -0.54
CD4-204ENST00000535707 USHBP1Q8N6Y0 703 aa11.67□□□□□ -0.54
CD4-204ENST00000535707 ZCRB1Q8TBF4 217 aaKnown RBP11.67□□□□□ -0.54
CD4-204ENST00000535707 USP35Q9P2H5 1018 aa11.67□□□□□ -0.54
CD4-204ENST00000535707 ADAMTS7Q9UKP4 1686 aa11.66□□□□□ -0.54
CD4-204ENST00000535707 HSP90AB1P08238 724 aaKnown RBP11.66□□□□□ -0.54
CD4-204ENST00000535707 DDB1Q16531 1140 aa11.66□□□□□ -0.54
CD4-204ENST00000535707 FAM98CQ17RN3 349 aaKnown RBP11.66□□□□□ -0.54
CD4-204ENST00000535707 LMOD3Q0VAK6 560 aa11.65□□□□□ -0.54
CD4-204ENST00000535707 AKAP4Q5JQC9 854 aa11.65□□□□□ -0.54
CD4-204ENST00000535707 POTEAQ6S8J7 498 aa11.65□□□□□ -0.54
CD4-204ENST00000535707 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
CD4-204ENST00000535707 IFNL2Q8IZJ0 200 aa11.65□□□□□ -0.54
CD4-204ENST00000535707 PYGBP11216 843 aa11.64□□□□□ -0.55
CD4-204ENST00000535707 NFE2L2Q16236 605 aa11.64□□□□□ -0.55
CD4-204ENST00000535707 CCDC27Q2M243 656 aa11.64□□□□□ -0.55
CD4-204ENST00000535707 MTHFSDQ2M296 383 aaKnown RBP11.64□□□□□ -0.55
CD4-204ENST00000535707 FAM9BQ8IZU0 186 aa11.64□□□□□ -0.55
CD4-204ENST00000535707 PHACTR3Q96KR7 559 aa11.64□□□□□ -0.55
CD4-204ENST00000535707 PHKG2P15735 406 aa11.63□□□□□ -0.55
CD4-204ENST00000535707 SEPT12Q8IYM1 358 aa11.63□□□□□ -0.55
CD4-204ENST00000535707 ZC3H15Q8WU90 426 aaKnown RBP11.63□□□□□ -0.55
CD4-204ENST00000535707 MAP3K5Q99683 1374 aa11.63□□□□□ -0.55
CD4-204ENST00000535707 RGS12O14924 1447 aa11.62□□□□□ -0.55
CD4-204ENST00000535707 GNAT3A8MTJ3 354 aa11.62□□□□□ -0.55
CD4-204ENST00000535707 TMPOP42166 694 aaKnown RBP11.62□□□□□ -0.55
CD4-204ENST00000535707 PDE3BQ13370 1112 aa11.62□□□□□ -0.55
CD4-204ENST00000535707 C1orf141Q5JVX7 400 aa11.62□□□□□ -0.55
CD4-204ENST00000535707 DCAF5Q96JK2 942 aa11.62□□□□□ -0.55
CD4-204ENST00000535707 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
CD4-204ENST00000535707 CYP27B1O15528 508 aa11.61□□□□□ -0.55
CD4-204ENST00000535707 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
CD4-204ENST00000535707 ZNF530Q6P9A1 599 aaPredicted RBP11.61□□□□□ -0.55
CD4-204ENST00000535707 CEMIPQ8WUJ3 1361 aa11.61□□□□□ -0.55
CD4-204ENST00000535707 MRC1P22897 1456 aa11.61□□□□□ -0.55
CD4-204ENST00000535707 SCN11AQ9UI33 1791 aa11.6□□□□□ -0.55
CD4-204ENST00000535707 APAF1O14727 1248 aa11.6□□□□□ -0.55
CD4-204ENST00000535707 CALD1Q05682 793 aaKnown RBP11.6□□□□□ -0.55
CD4-204ENST00000535707 KRT27Q7Z3Y8 459 aa11.6□□□□□ -0.55
CD4-204ENST00000535707 CCDC146Q8IYE0 955 aa11.6□□□□□ -0.55
CD4-204ENST00000535707 DLG5Q8TDM6 1919 aa11.6□□□□□ -0.55
CD4-204ENST00000535707 BRWD3Q6RI45 1802 aa11.6□□□□□ -0.55
CD4-204ENST00000535707 ERVV-2B6SEH9 535 aa11.59□□□□□ -0.55
CD4-204ENST00000535707 RIPK4P57078 832 aa11.59□□□□□ -0.55
CD4-204ENST00000535707 MARCH10Q8NA82 808 aaPredicted RBP11.59□□□□□ -0.55
CD4-204ENST00000535707 SPDYE1Q8NFV5 336 aaPredicted RBP11.59□□□□□ -0.55
CD4-204ENST00000535707 RTF1Q92541 710 aaKnown RBP11.59□□□□□ -0.55
CD4-204ENST00000535707 SLC24A3Q9HC58 644 aa11.59□□□□□ -0.55
CD4-204ENST00000535707 BABAM1Q9NWV8 329 aa11.59□□□□□ -0.55
CD4-204ENST00000535707 A0A0G2JS52 829 aa11.58□□□□□ -0.56
CD4-204ENST00000535707 MYT1Q01538 1121 aa11.58□□□□□ -0.56
CD4-204ENST00000535707 FAM196AQ6ZSG2 479 aa11.58□□□□□ -0.56
CD4-204ENST00000535707 KDM6AO15550 1401 aaPredicted RBP11.58□□□□□ -0.56
CD4-204ENST00000535707 NHSQ6T4R5 1651 aa11.57□□□□□ -0.56
CD4-204ENST00000535707 WDR63Q8IWG1 891 aa11.57□□□□□ -0.56
CD4-204ENST00000535707 DDX54Q8TDD1 881 aaKnown RBP11.57□□□□□ -0.56
CD4-204ENST00000535707 ARHGEF1Q92888 912 aaKnown RBP11.57□□□□□ -0.56
CD4-204ENST00000535707 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
CD4-204ENST00000535707 IL16Q14005 1332 aa11.57□□□□□ -0.56
CD4-204ENST00000535707 SIPA1L3O60292 1781 aaPredicted RBP11.56□□□□□ -0.56
CD4-204ENST00000535707 VIRMAQ69YN4 1812 aaKnown RBP11.56□□□□□ -0.56
CD4-204ENST00000535707 RNMTO43148 476 aaKnown RBP11.56□□□□□ -0.56
CD4-204ENST00000535707 DOT1LQ8TEK3 1739 aa11.56□□□□□ -0.56
CD4-204ENST00000535707 TOGARAM1Q9Y4F4 1720 aa11.56□□□□□ -0.56
CD4-204ENST00000535707 ZNF521Q96K83 1311 aa11.56□□□□□ -0.56
CD4-204ENST00000535707 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
CD4-204ENST00000535707 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
CD4-204ENST00000535707 IL17REQ8NFR9 667 aa11.55□□□□□ -0.56
CD4-204ENST00000535707 SBF2Q86WG5 1849 aa11.55□□□□□ -0.56
CD4-204ENST00000535707 MPRIPQ6WCQ1 1025 aa11.54□□□□□ -0.56
CD4-204ENST00000535707 SLC52A2Q9HAB3 445 aa11.54□□□□□ -0.56
CD4-204ENST00000535707 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
CD4-204ENST00000535707 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
CD4-204ENST00000535707 ITGB4P16144 1822 aa11.53□□□□□ -0.56
CD4-204ENST00000535707 PAPPAQ13219 1627 aa11.53□□□□□ -0.56
CD4-204ENST00000535707 ZNF831Q5JPB2 1677 aa11.53□□□□□ -0.56
CD4-204ENST00000535707 HMGB2P26583 209 aaKnown RBP11.53□□□□□ -0.56
CD4-204ENST00000535707 TEFQ10587 303 aa11.53□□□□□ -0.56
CD4-204ENST00000535707 CCDC125Q86Z20 511 aa11.53□□□□□ -0.56
CD4-204ENST00000535707 RGPD3A6NKT7 1758 aaPredicted RBP11.53□□□□□ -0.56
CD4-204ENST00000535707 RGPD4Q7Z3J3 1758 aa11.53□□□□□ -0.56
CD4-204ENST00000535707 CABP4P57796 275 aa11.52□□□□□ -0.57
CD4-204ENST00000535707 GNAI1P63096 354 aa11.52□□□□□ -0.57
CD4-204ENST00000535707 HNRNPUQ00839 825 aaKnown RBP eCLIP11.52□□□□□ -0.57
CD4-204ENST00000535707 TAF7Q15545 349 aaPredicted RBP11.52□□□□□ -0.57
CD4-204ENST00000535707 LGR6Q9HBX8 967 aa11.52□□□□□ -0.57
CD4-204ENST00000535707 IFT57Q9NWB7 429 aa11.52□□□□□ -0.57
CD4-204ENST00000535707 TMOD3Q9NYL9 352 aa11.52□□□□□ -0.57
CD4-204ENST00000535707 RRP7AQ9Y3A4 280 aaKnown RBP11.52□□□□□ -0.57
CD4-204ENST00000535707 CICQ96RK0 1608 aaPredicted RBP11.52□□□□□ -0.57
CD4-204ENST00000535707 KDM3BQ7LBC6 1761 aa11.51□□□□□ -0.57
CD4-204ENST00000535707 ZNF853P0CG23 659 aa11.51□□□□□ -0.57
CD4-204ENST00000535707 MCM10Q7L590 875 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms