RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 CCNL1Q9UK58 526 aaPredicted RBP14.74□□□□□ -0.05
CCDC60-202ENST00000535685 C5P01031 1676 aa14.74□□□□□ -0.05
CCDC60-202ENST00000535685 NPC1L1Q9UHC9 1359 aa14.73□□□□□ -0.05
CCDC60-202ENST00000535685 PHKG2P15735 406 aa14.73□□□□□ -0.05
CCDC60-202ENST00000535685 SPOCK2Q92563 424 aa14.73□□□□□ -0.05
CCDC60-202ENST00000535685 MAP3K5Q99683 1374 aa14.73□□□□□ -0.05
CCDC60-202ENST00000535685 PNPLA7Q6ZV29 1317 aa14.72□□□□□ -0.05
CCDC60-202ENST00000535685 PLCD3Q8N3E9 789 aa14.72□□□□□ -0.05
CCDC60-202ENST00000535685 KDRP35968 1356 aa14.72□□□□□ -0.05
CCDC60-202ENST00000535685 PALLDQ8WX93 1383 aa14.72□□□□□ -0.05
CCDC60-202ENST00000535685 MPRIPQ6WCQ1 1025 aa14.71□□□□□ -0.05
CCDC60-202ENST00000535685 PIGBQ92521 554 aa14.71□□□□□ -0.05
CCDC60-202ENST00000535685 HSP90AB1P08238 724 aaKnown RBP14.7□□□□□ -0.06
CCDC60-202ENST00000535685 IL13P35225 146 aa14.7□□□□□ -0.06
CCDC60-202ENST00000535685 KCNQ4P56696 695 aa14.7□□□□□ -0.06
CCDC60-202ENST00000535685 AMOTQ4VCS5 1084 aa14.7□□□□□ -0.06
CCDC60-202ENST00000535685 PLEKHO1Q53GL0 409 aaPredicted RBP14.7□□□□□ -0.06
CCDC60-202ENST00000535685 TFCP2L1Q9NZI6 479 aa14.7□□□□□ -0.06
CCDC60-202ENST00000535685 ZNF831Q5JPB2 1677 aa14.7□□□□□ -0.06
CCDC60-202ENST00000535685 UBR3Q6ZT12 1888 aa14.69□□□□□ -0.06
CCDC60-202ENST00000535685 ERVV-2B6SEH9 535 aa14.69□□□□□ -0.06
CCDC60-202ENST00000535685 FLAD1Q8NFF5 587 aa14.69□□□□□ -0.06
CCDC60-202ENST00000535685 C4BP0C0L5 1744 aa14.69□□□□□ -0.06
CCDC60-202ENST00000535685 DCAF5Q96JK2 942 aa14.68□□□□□ -0.06
CCDC60-202ENST00000535685 ARXQ96QS3 562 aa14.68□□□□□ -0.06
CCDC60-202ENST00000535685 SYT17Q9BSW7 474 aa14.68□□□□□ -0.06
CCDC60-202ENST00000535685 TMOD3Q9NYL9 352 aa14.68□□□□□ -0.06
CCDC60-202ENST00000535685 FHDC1Q9C0D6 1143 aaPredicted RBP14.67□□□□□ -0.06
CCDC60-202ENST00000535685 CHD4Q14839 1912 aa14.66□□□□□ -0.06
CCDC60-202ENST00000535685 SCN11AQ9UI33 1791 aa14.66□□□□□ -0.06
CCDC60-202ENST00000535685 LOC102724428A0A0B4J2F2 783 aa14.66□□□□□ -0.06
CCDC60-202ENST00000535685 MTHFSP49914 203 aa14.66□□□□□ -0.06
CCDC60-202ENST00000535685 SIK1P57059 783 aa14.66□□□□□ -0.06
CCDC60-202ENST00000535685 COL23A1Q86Y22 540 aaPredicted RBP14.66□□□□□ -0.06
CCDC60-202ENST00000535685 MIER1Q8N108 512 aa14.66□□□□□ -0.06
CCDC60-202ENST00000535685 VIRMAQ69YN4 1812 aaKnown RBP14.65□□□□□ -0.06
CCDC60-202ENST00000535685 POLD1P28340 1107 aa14.65□□□□□ -0.06
CCDC60-202ENST00000535685 SULT6B1Q6IMI4 303 aa14.65□□□□□ -0.06
CCDC60-202ENST00000535685 AEBP1Q8IUX7 1158 aa14.65□□□□□ -0.06
CCDC60-202ENST00000535685 ZNF530Q6P9A1 599 aaPredicted RBP14.64□□□□□ -0.07
CCDC60-202ENST00000535685 ATG3Q9NT62 314 aa14.64□□□□□ -0.07
CCDC60-202ENST00000535685 ASAP1Q9ULH1 1129 aa14.64□□□□□ -0.07
CCDC60-202ENST00000535685 KDM6AO15550 1401 aaPredicted RBP14.64□□□□□ -0.07
CCDC60-202ENST00000535685 MYH14Q7Z406 1995 aaKnown RBP14.62□□□□□ -0.07
CCDC60-202ENST00000535685 COL5A3P25940 1745 aaPredicted RBP14.61□□□□□ -0.07
CCDC60-202ENST00000535685 SSFA2P28290 1259 aa14.61□□□□□ -0.07
CCDC60-202ENST00000535685 C1orf141Q5JVX7 400 aa14.61□□□□□ -0.07
CCDC60-202ENST00000535685 CC2D1BQ5T0F9 858 aaKnown RBP14.61□□□□□ -0.07
CCDC60-202ENST00000535685 AK7Q96M32 723 aa14.61□□□□□ -0.07
CCDC60-202ENST00000535685 CICQ96RK0 1608 aaPredicted RBP14.61□□□□□ -0.07
CCDC60-202ENST00000535685 COL3A1P02461 1466 aaPredicted RBP14.61□□□□□ -0.07
CCDC60-202ENST00000535685 ADAMTS7Q9UKP4 1686 aa14.61□□□□□ -0.07
CCDC60-202ENST00000535685 DIAPH1O60610 1272 aaKnown RBP14.6□□□□□ -0.07
CCDC60-202ENST00000535685 ITPK1Q13572 414 aa14.6□□□□□ -0.07
CCDC60-202ENST00000535685 AKAP4Q5JQC9 854 aa14.6□□□□□ -0.07
CCDC60-202ENST00000535685 LINC00116Q8NCU8 138 aa14.6□□□□□ -0.07
CCDC60-202ENST00000535685 ATP6V1AP38606 617 aa14.59□□□□□ -0.07
CCDC60-202ENST00000535685 CABP4P57796 275 aa14.59□□□□□ -0.07
CCDC60-202ENST00000535685 RC3H1Q5TC82 1133 aaKnown RBP14.59□□□□□ -0.07
CCDC60-202ENST00000535685 PLCB2Q00722 1185 aa14.58□□□□□ -0.08
CCDC60-202ENST00000535685 AMIGO3Q86WK7 504 aa14.58□□□□□ -0.08
CCDC60-202ENST00000535685 SLC4A9Q96Q91 983 aa14.58□□□□□ -0.08
CCDC60-202ENST00000535685 MRC1P22897 1456 aa14.57□□□□□ -0.08
CCDC60-202ENST00000535685 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.57□□□□□ -0.08
CCDC60-202ENST00000535685 YY1P25490 414 aa14.57□□□□□ -0.08
CCDC60-202ENST00000535685 CNTNAP4Q9C0A0 1308 aa14.57□□□□□ -0.08
CCDC60-202ENST00000535685 NFATC2IPQ8NCF5 419 aa14.56□□□□□ -0.08
CCDC60-202ENST00000535685 ECM2O94769 699 aaPredicted RBP14.55□□□□□ -0.08
CCDC60-202ENST00000535685 HMOX1P09601 288 aa14.55□□□□□ -0.08
CCDC60-202ENST00000535685 SLC52A2Q9HAB3 445 aa14.55□□□□□ -0.08
CCDC60-202ENST00000535685 CD2APQ9Y5K6 639 aa14.55□□□□□ -0.08
CCDC60-202ENST00000535685 GNPATO15228 680 aa14.54□□□□□ -0.08
CCDC60-202ENST00000535685 RNMTO43148 476 aaKnown RBP14.54□□□□□ -0.08
CCDC60-202ENST00000535685 MTHFSDQ2M296 383 aaKnown RBP14.54□□□□□ -0.08
CCDC60-202ENST00000535685 UTRNP46939 3433 aa14.54□□□□□ -0.08
CCDC60-202ENST00000535685 TJP1Q07157 1748 aa14.53□□□□□ -0.08
CCDC60-202ENST00000535685 RPS6KA4O75676 772 aa14.53□□□□□ -0.08
CCDC60-202ENST00000535685 MSL1Q68DK7 614 aa14.53□□□□□ -0.08
CCDC60-202ENST00000535685 RBM42Q9BTD8 480 aaKnown RBP14.53□□□□□ -0.08
CCDC60-202ENST00000535685 RTCBQ9Y3I0 505 aaKnown RBP14.53□□□□□ -0.08
CCDC60-202ENST00000535685 KIF13BQ9NQT8 1826 aa14.52□□□□□ -0.08
CCDC60-202ENST00000535685 PHF14O94880 888 aa14.52□□□□□ -0.09
CCDC60-202ENST00000535685 LGR6Q9HBX8 967 aa14.52□□□□□ -0.09
CCDC60-202ENST00000535685 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.09
CCDC60-202ENST00000535685 UBR2Q8IWV8 1755 aa14.52□□□□□ -0.09
CCDC60-202ENST00000535685 TRAPPC3LQ5T215 181 aa14.51□□□□□ -0.09
CCDC60-202ENST00000535685 NLGN2Q8NFZ4 835 aa14.51□□□□□ -0.09
CCDC60-202ENST00000535685 GAS2L2Q8NHY3 880 aa14.51□□□□□ -0.09
CCDC60-202ENST00000535685 CFAP53Q96M91 514 aa14.51□□□□□ -0.09
CCDC60-202ENST00000535685 SIPA1L3O60292 1781 aaPredicted RBP14.51□□□□□ -0.09
CCDC60-202ENST00000535685 C4AP0C0L4 1744 aa14.51□□□□□ -0.09
CCDC60-202ENST00000535685 PPP2R1AP30153 589 aa14.5□□□□□ -0.09
CCDC60-202ENST00000535685 SMIM5Q71RC9 77 aa14.5□□□□□ -0.09
CCDC60-202ENST00000535685 NLGN1Q8N2Q7 840 aa14.5□□□□□ -0.09
CCDC60-202ENST00000535685 GOLGB1Q14789 3259 aaKnown RBP14.49□□□□□ -0.09
CCDC60-202ENST00000535685 PTCD1O75127 700 aaKnown RBP14.49□□□□□ -0.09
CCDC60-202ENST00000535685 GPR162Q16538 588 aa14.49□□□□□ -0.09
CCDC60-202ENST00000535685 ARHGEF1Q92888 912 aaKnown RBP14.49□□□□□ -0.09
CCDC60-202ENST00000535685 NUDCQ9Y266 331 aa14.49□□□□□ -0.09
CCDC60-202ENST00000535685 KCPQ6ZWJ8 1503 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms