RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 RBM42Q9BTD8 480 aaKnown RBP15.95■□□□□ 0.14
KNTC1-208ENST00000535410 MAP3K5Q99683 1374 aa15.95■□□□□ 0.14
KNTC1-208ENST00000535410 NFATC2IPQ8NCF5 419 aa15.94■□□□□ 0.14
KNTC1-208ENST00000535410 QSER1Q2KHR3 1735 aa15.93■□□□□ 0.14
KNTC1-208ENST00000535410 ITGB4P16144 1822 aa15.92■□□□□ 0.14
KNTC1-208ENST00000535410 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.92■□□□□ 0.14
KNTC1-208ENST00000535410 GNPATO15228 680 aa15.92■□□□□ 0.14
KNTC1-208ENST00000535410 RC3H1Q5TC82 1133 aaKnown RBP15.92■□□□□ 0.14
KNTC1-208ENST00000535410 KLHL34Q8N239 644 aa15.92■□□□□ 0.14
KNTC1-208ENST00000535410 LINC00116Q8NCU8 138 aa15.92■□□□□ 0.14
KNTC1-208ENST00000535410 GAS2L2Q8NHY3 880 aa15.92■□□□□ 0.14
KNTC1-208ENST00000535410 RTCBQ9Y3I0 505 aaKnown RBP15.92■□□□□ 0.14
KNTC1-208ENST00000535410 PHF14O94880 888 aa15.91■□□□□ 0.14
KNTC1-208ENST00000535410 ITPK1Q13572 414 aa15.91■□□□□ 0.14
KNTC1-208ENST00000535410 TRAPPC3LQ5T215 181 aa15.91■□□□□ 0.14
KNTC1-208ENST00000535410 TOGARAM1Q9Y4F4 1720 aa15.91■□□□□ 0.14
KNTC1-208ENST00000535410 YY1P25490 414 aa15.9■□□□□ 0.14
KNTC1-208ENST00000535410 MTHFSDQ2M296 383 aaKnown RBP15.9■□□□□ 0.14
KNTC1-208ENST00000535410 SLC52A2Q9HAB3 445 aa15.9■□□□□ 0.14
KNTC1-208ENST00000535410 KDM6AO15550 1401 aaPredicted RBP15.9■□□□□ 0.14
KNTC1-208ENST00000535410 C5P01031 1676 aa15.89■□□□□ 0.13
KNTC1-208ENST00000535410 RNMTO43148 476 aaKnown RBP15.89■□□□□ 0.13
KNTC1-208ENST00000535410 PTCD1O75127 700 aaKnown RBP15.89■□□□□ 0.13
KNTC1-208ENST00000535410 GPR162Q16538 588 aa15.89■□□□□ 0.13
KNTC1-208ENST00000535410 CNTNAP4Q9C0A0 1308 aa15.89■□□□□ 0.13
KNTC1-208ENST00000535410 PPP2R1AP30153 589 aa15.88■□□□□ 0.13
KNTC1-208ENST00000535410 MSL1Q68DK7 614 aa15.88■□□□□ 0.13
KNTC1-208ENST00000535410 NLGN1Q8N2Q7 840 aa15.88■□□□□ 0.13
KNTC1-208ENST00000535410 CD2APQ9Y5K6 639 aa15.88■□□□□ 0.13
KNTC1-208ENST00000535410 C4BP0C0L5 1744 aa15.88■□□□□ 0.13
KNTC1-208ENST00000535410 GNAT3A8MTJ3 354 aa15.87■□□□□ 0.13
KNTC1-208ENST00000535410 RPS6KA4O75676 772 aa15.87■□□□□ 0.13
KNTC1-208ENST00000535410 NEFMP07197 916 aa15.87■□□□□ 0.13
KNTC1-208ENST00000535410 LGR6Q9HBX8 967 aa15.87■□□□□ 0.13
KNTC1-208ENST00000535410 FCHSD2O94868 740 aa15.86■□□□□ 0.13
KNTC1-208ENST00000535410 U2AF1L5P0DN76 240 aaPredicted RBP15.86■□□□□ 0.13
KNTC1-208ENST00000535410 RFC4P35249 363 aa15.86■□□□□ 0.13
KNTC1-208ENST00000535410 U2AF1Q01081 240 aaKnown RBP eCLIP15.86■□□□□ 0.13
KNTC1-208ENST00000535410 TEFQ10587 303 aa15.86■□□□□ 0.13
KNTC1-208ENST00000535410 GRIN3BO60391 1043 aa15.85■□□□□ 0.13
KNTC1-208ENST00000535410 TTC5Q8N0Z6 440 aa15.85■□□□□ 0.13
KNTC1-208ENST00000535410 SLC4A9Q96Q91 983 aa15.85■□□□□ 0.13
KNTC1-208ENST00000535410 VSIG10Q8N0Z9 540 aa15.84■□□□□ 0.13
KNTC1-208ENST00000535410 PNNQ9H307 717 aaKnown RBP15.84■□□□□ 0.13
KNTC1-208ENST00000535410 TAF1LQ8IZX4 1826 aa15.84■□□□□ 0.13
KNTC1-208ENST00000535410 PRKAR2BP31323 418 aa15.83■□□□□ 0.12
KNTC1-208ENST00000535410 CRKLP46109 303 aaKnown RBP15.83■□□□□ 0.12
KNTC1-208ENST00000535410 RTF1Q92541 710 aaKnown RBP15.83■□□□□ 0.12
KNTC1-208ENST00000535410 ARHGEF1Q92888 912 aaKnown RBP15.83■□□□□ 0.12
KNTC1-208ENST00000535410 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.12
KNTC1-208ENST00000535410 ZNF831Q5JPB2 1677 aa15.83■□□□□ 0.12
KNTC1-208ENST00000535410 AMIGO3Q86WK7 504 aa15.82■□□□□ 0.12
KNTC1-208ENST00000535410 PELP1Q8IZL8 1130 aaKnown RBP15.82■□□□□ 0.12
KNTC1-208ENST00000535410 TEX13AQ9BXU3 409 aaPredicted RBP15.82■□□□□ 0.12
KNTC1-208ENST00000535410 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
KNTC1-208ENST00000535410 COL24A1Q17RW2 1714 aa15.82■□□□□ 0.12
KNTC1-208ENST00000535410 TUBGCP6Q96RT7 1819 aa15.82■□□□□ 0.12
KNTC1-208ENST00000535410 STARD3NLO95772 234 aa15.81■□□□□ 0.12
KNTC1-208ENST00000535410 CCDC87Q9NVE4 849 aa15.81■□□□□ 0.12
KNTC1-208ENST00000535410 HTATSF1O43719 755 aaKnown RBP15.8■□□□□ 0.12
KNTC1-208ENST00000535410 MMP10P09238 476 aa15.8■□□□□ 0.12
KNTC1-208ENST00000535410 SLC39A6Q13433 755 aa15.8■□□□□ 0.12
KNTC1-208ENST00000535410 RALBP1Q15311 655 aa15.8■□□□□ 0.12
KNTC1-208ENST00000535410 SMIM5Q71RC9 77 aa15.8■□□□□ 0.12
KNTC1-208ENST00000535410 IL17REQ8NFR9 667 aa15.8■□□□□ 0.12
KNTC1-208ENST00000535410 NLGN2Q8NFZ4 835 aa15.8■□□□□ 0.12
KNTC1-208ENST00000535410 PARP3Q9Y6F1 533 aa15.8■□□□□ 0.12
KNTC1-208ENST00000535410 ZPR1O75312 459 aa15.79■□□□□ 0.12
KNTC1-208ENST00000535410 DNAJC10Q8IXB1 793 aa15.79■□□□□ 0.12
KNTC1-208ENST00000535410 MRC1P22897 1456 aa15.78■□□□□ 0.12
KNTC1-208ENST00000535410 UBR3Q6ZT12 1888 aa15.78■□□□□ 0.12
KNTC1-208ENST00000535410 SCN11AQ9UI33 1791 aa15.78■□□□□ 0.12
KNTC1-208ENST00000535410 CYP19A1P11511 503 aaPredicted RBP15.78■□□□□ 0.12
KNTC1-208ENST00000535410 ZNF790Q6PG37 636 aa15.78■□□□□ 0.12
KNTC1-208ENST00000535410 NPM2Q86SE8 214 aaKnown RBP15.78■□□□□ 0.12
KNTC1-208ENST00000535410 PHACTR3Q96KR7 559 aa15.78■□□□□ 0.12
KNTC1-208ENST00000535410 GYS1P13807 737 aa15.77■□□□□ 0.12
KNTC1-208ENST00000535410 INTS5Q6P9B9 1019 aaKnown RBP15.77■□□□□ 0.12
KNTC1-208ENST00000535410 FMNL2Q96PY5 1086 aa15.77■□□□□ 0.12
KNTC1-208ENST00000535410 A0A087WZG4 1122 aa15.76■□□□□ 0.11
KNTC1-208ENST00000535410 BTBD11A6QL63 1104 aa15.76■□□□□ 0.11
KNTC1-208ENST00000535410 ZEB1P37275 1124 aaPredicted RBP15.76■□□□□ 0.11
KNTC1-208ENST00000535410 TGFB2P61812 414 aa15.76■□□□□ 0.11
KNTC1-208ENST00000535410 DDX10Q13206 875 aaKnown RBP15.75■□□□□ 0.11
KNTC1-208ENST00000535410 CEMIPQ8WUJ3 1361 aa15.75■□□□□ 0.11
KNTC1-208ENST00000535410 USP42Q9H9J4 1324 aaKnown RBP15.74■□□□□ 0.11
KNTC1-208ENST00000535410 SOS1Q07889 1333 aaPredicted RBP15.73■□□□□ 0.11
KNTC1-208ENST00000535410 ZNF496Q96IT1 587 aaPredicted RBP15.73■□□□□ 0.11
KNTC1-208ENST00000535410 NARFQ9UHQ1 456 aa15.73■□□□□ 0.11
KNTC1-208ENST00000535410 MAPK8IP3Q9UPT6 1336 aa15.72■□□□□ 0.11
KNTC1-208ENST00000535410 CANXP27824 592 aaKnown RBP15.72■□□□□ 0.11
KNTC1-208ENST00000535410 PNISRQ8TF01 805 aaKnown RBP15.72■□□□□ 0.11
KNTC1-208ENST00000535410 ADAMTS7Q9UKP4 1686 aa15.72■□□□□ 0.11
KNTC1-208ENST00000535410 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
KNTC1-208ENST00000535410 YBX3P16989 372 aaKnown RBP eCLIP15.71■□□□□ 0.11
KNTC1-208ENST00000535410 TAF7Q15545 349 aaPredicted RBP15.71■□□□□ 0.11
KNTC1-208ENST00000535410 USPL1Q5W0Q7 1092 aa15.71■□□□□ 0.11
KNTC1-208ENST00000535410 SRP68Q9UHB9 627 aaKnown RBP15.71■□□□□ 0.11
KNTC1-208ENST00000535410 COL5A3P25940 1745 aaPredicted RBP15.71■□□□□ 0.1
KNTC1-208ENST00000535410 CICQ96RK0 1608 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms