RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 TFCP2L1Q9NZI6 479 aa15.23■□□□□ 0.03
TNC-209ENST00000534839 HIRIP3Q9BW71 556 aaPredicted RBP15.22■□□□□ 0.03
TNC-209ENST00000534839 LOC105371045A0A1W2PR82 267 aa15.21■□□□□ 0.03
TNC-209ENST00000534839 MSL1Q68DK7 614 aa15.21■□□□□ 0.03
TNC-209ENST00000534839 TOM1L2Q6ZVM7 507 aa15.21■□□□□ 0.03
TNC-209ENST00000534839 BRD4O60885 1362 aaPredicted RBP15.21■□□□□ 0.02
TNC-209ENST00000534839 USP19O94966 1318 aa15.2■□□□□ 0.02
TNC-209ENST00000534839 IGSF1Q8N6C5 1336 aa15.2■□□□□ 0.02
TNC-209ENST00000534839 FOXK1P85037 733 aa15.2■□□□□ 0.02
TNC-209ENST00000534839 ABHD8Q96I13 439 aa15.2■□□□□ 0.02
TNC-209ENST00000534839 ROCK1Q13464 1354 aa15.2■□□□□ 0.02
TNC-209ENST00000534839 CICQ96RK0 1608 aaPredicted RBP15.2■□□□□ 0.02
TNC-209ENST00000534839 FOXN1O15353 648 aa15.19■□□□□ 0.02
TNC-209ENST00000534839 CDCA7Q9BWT1 371 aaPredicted RBP15.19■□□□□ 0.02
TNC-209ENST00000534839 PRDM10Q9NQV6 1147 aa15.19■□□□□ 0.02
TNC-209ENST00000534839 BTAF1O14981 1849 aa15.18■□□□□ 0.02
TNC-209ENST00000534839 EXOC5O00471 708 aa15.18■□□□□ 0.02
TNC-209ENST00000534839 HOXB3P14651 431 aaPredicted RBP15.18■□□□□ 0.02
TNC-209ENST00000534839 RGS19P49795 217 aa15.18■□□□□ 0.02
TNC-209ENST00000534839 MFSD10Q14728 455 aa15.18■□□□□ 0.02
TNC-209ENST00000534839 USP6P35125 1406 aa15.17■□□□□ 0.02
TNC-209ENST00000534839 KCNQ4P56696 695 aa15.17■□□□□ 0.02
TNC-209ENST00000534839 PLPP6Q8IY26 295 aa15.17■□□□□ 0.02
TNC-209ENST00000534839 ZBTB7CA1YPR0 619 aa15.16■□□□□ 0.02
TNC-209ENST00000534839 COL23A1Q86Y22 540 aaPredicted RBP15.16■□□□□ 0.02
TNC-209ENST00000534839 PIK3C2GO75747 1445 aa15.16■□□□□ 0.02
TNC-209ENST00000534839 GCP02774 474 aa15.15■□□□□ 0.02
TNC-209ENST00000534839 SLC27A3Q5K4L6 730 aa15.15■□□□□ 0.02
TNC-209ENST00000534839 PPP1R15BQ5SWA1 713 aa15.15■□□□□ 0.02
TNC-209ENST00000534839 POGKQ9P215 609 aa15.15■□□□□ 0.02
TNC-209ENST00000534839 DDX27Q96GQ7 796 aaKnown RBP15.14■□□□□ 0.01
TNC-209ENST00000534839 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
TNC-209ENST00000534839 EIF3AQ14152 1382 aaKnown RBP15.13■□□□□ 0.01
TNC-209ENST00000534839 ABTB2Q8N961 1025 aa15.13■□□□□ 0.01
TNC-209ENST00000534839 SMC1BQ8NDV3 1235 aa15.13■□□□□ 0.01
TNC-209ENST00000534839 WDR17Q8IZU2 1322 aa15.13■□□□□ 0.01
TNC-209ENST00000534839 TRPM1Q7Z4N2 1603 aa15.12■□□□□ 0.01
TNC-209ENST00000534839 MINK1Q8N4C8 1332 aaPredicted RBP15.12■□□□□ 0.01
TNC-209ENST00000534839 WASLO00401 505 aaPredicted RBP15.11■□□□□ 0.01
TNC-209ENST00000534839 RGL3Q3MIN7 710 aa15.11■□□□□ 0.01
TNC-209ENST00000534839 RRAGCQ9HB90 399 aa15.11■□□□□ 0.01
TNC-209ENST00000534839 C10orf71Q711Q0 1435 aa15.1■□□□□ 0.01
TNC-209ENST00000534839 AXIN2Q9Y2T1 843 aa15.1■□□□□ 0.01
TNC-209ENST00000534839 KCPQ6ZWJ8 1503 aa15.1■□□□□ 0.01
TNC-209ENST00000534839 CCDC85CA6NKD9 419 aa15.09■□□□□ 0.01
TNC-209ENST00000534839 C14orf93Q9H972 538 aaKnown RBP15.09■□□□□ 0.01
TNC-209ENST00000534839 CTCFP49711 727 aaPredicted RBP15.08■□□□□ 0
TNC-209ENST00000534839 LCE2DQ5TA82 110 aaPredicted RBP15.08■□□□□ 0
TNC-209ENST00000534839 FAM163AQ96GL9 167 aaPredicted RBP15.08■□□□□ 0
TNC-209ENST00000534839 CFAP70Q5T0N1 1121 aa15.07■□□□□ 0
TNC-209ENST00000534839 NLRP13Q86W25 1043 aa15.07■□□□□ 0
TNC-209ENST00000534839 CARD10Q9BWT7 1032 aa15.07■□□□□ 0
TNC-209ENST00000534839 COL18A1P39060 1754 aa15.06■□□□□ 0
TNC-209ENST00000534839 PXDNLA1KZ92 1463 aa15.06■□□□□ 0
TNC-209ENST00000534839 SNPHO15079 494 aa15.05■□□□□ -0
TNC-209ENST00000534839 LBX1P52954 281 aa15.05■□□□□ -0
TNC-209ENST00000534839 ARHGAP27Q6ZUM4 889 aa15.05■□□□□ -0
TNC-209ENST00000534839 NUDT16Q96DE0 195 aaKnown RBP15.05■□□□□ -0
TNC-209ENST00000534839 MKRN1Q9UHC7 482 aaKnown RBP15.05■□□□□ -0
TNC-209ENST00000534839 ACEP12821 1306 aa15.05■□□□□ -0
TNC-209ENST00000534839 KDM2BQ8NHM5 1336 aa15.05■□□□□ -0
TNC-209ENST00000534839 ABCC6O95255 1503 aa15.05■□□□□ -0
TNC-209ENST00000534839 PIK3C2AO00443 1686 aa15.05■□□□□ -0
TNC-209ENST00000534839 ITSN1Q15811 1721 aa15.04■□□□□ -0
TNC-209ENST00000534839 POLR3AO14802 1390 aaPredicted RBP15.04■□□□□ -0
TNC-209ENST00000534839 C9orf131Q5VYM1 1079 aa15.04■□□□□ -0
TNC-209ENST00000534839 PLEKHG2Q9H7P9 1386 aa15.03■□□□□ -0
TNC-209ENST00000534839 ST18O60284 1047 aa15.03■□□□□ -0
TNC-209ENST00000534839 DOK7Q18PE1 504 aa15.03■□□□□ -0
TNC-209ENST00000534839 EMILIN3Q9NT22 766 aa15.03■□□□□ -0
TNC-209ENST00000534839 TNRC18O15417 2968 aaPredicted RBP15.03■□□□□ -0
TNC-209ENST00000534839 SPATA31E1Q6ZUB1 1445 aa15.02■□□□□ -0
TNC-209ENST00000534839 BCS1LQ9Y276 419 aa15.02■□□□□ -0
TNC-209ENST00000534839 PPIP5K1Q6PFW1 1433 aa15.01□□□□□ -0.01
TNC-209ENST00000534839 TNRC6CQ9HCJ0 1690 aaKnown RBP15.01□□□□□ -0.01
TNC-209ENST00000534839 CSB-PGBD3P0DP91 1061 aa15.01□□□□□ -0.01
TNC-209ENST00000534839 AIDAQ96BJ3 306 aa15.01□□□□□ -0.01
TNC-209ENST00000534839 WDR70Q9NW82 654 aa15.01□□□□□ -0.01
TNC-209ENST00000534839 ITGAEP38570 1179 aa15□□□□□ -0.01
TNC-209ENST00000534839 CAMK2BQ13554 666 aa15□□□□□ -0.01
TNC-209ENST00000534839 KHSRPQ92945 711 aaKnown RBP eCLIP15□□□□□ -0.01
TNC-209ENST00000534839 TRAK1Q9UPV9 953 aa15□□□□□ -0.01
TNC-209ENST00000534839 LY75O60449 1722 aa15□□□□□ -0.01
TNC-209ENST00000534839 PKD1L3Q7Z443 1732 aa15□□□□□ -0.01
TNC-209ENST00000534839 CCDC7Q96M83 1385 aa14.99□□□□□ -0.01
TNC-209ENST00000534839 VSIG10Q8N0Z9 540 aa14.99□□□□□ -0.01
TNC-209ENST00000534839 GPR153Q6NV75 609 aa14.98□□□□□ -0.01
TNC-209ENST00000534839 PTCD2Q8WV60 388 aaKnown RBP14.98□□□□□ -0.01
TNC-209ENST00000534839 CCNL1Q9UK58 526 aaPredicted RBP14.98□□□□□ -0.01
TNC-209ENST00000534839 SLIT3O75094 1523 aa14.97□□□□□ -0.01
TNC-209ENST00000534839 ARSIQ5FYB1 569 aa14.97□□□□□ -0.01
TNC-209ENST00000534839 ZNF710Q8N1W2 664 aa14.97□□□□□ -0.01
TNC-209ENST00000534839 OXER1Q8TDS5 423 aa14.97□□□□□ -0.01
TNC-209ENST00000534839 PCDHGA4Q9Y5G9 962 aa14.97□□□□□ -0.01
TNC-209ENST00000534839 RGPD5Q99666 1765 aa14.97□□□□□ -0.01
TNC-209ENST00000534839 HSPA8P11142 646 aaKnown RBP14.96□□□□□ -0.01
TNC-209ENST00000534839 E2F4Q16254 413 aa14.96□□□□□ -0.01
TNC-209ENST00000534839 SMIM5Q71RC9 77 aa14.96□□□□□ -0.01
TNC-209ENST00000534839 QRICH2Q9H0J4 1663 aa14.96□□□□□ -0.01
TNC-209ENST00000534839 KIAA1551Q9HCM1 1747 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms