RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 POTEJP0CG39 1038 aa10.15□□□□□ -0.78
GEN1-207ENST00000534669 IRX5P78411 483 aaPredicted RBP10.15□□□□□ -0.78
GEN1-207ENST00000534669 NLGN2Q8NFZ4 835 aa10.15□□□□□ -0.78
GEN1-207ENST00000534669 GOLGB1Q14789 3259 aaKnown RBP10.14□□□□□ -0.79
GEN1-207ENST00000534669 SENP3-EIF4A1A0A087X0R7 540 aa10.14□□□□□ -0.79
GEN1-207ENST00000534669 PLCG2P16885 1265 aa10.14□□□□□ -0.79
GEN1-207ENST00000534669 C1QTNF8P60827 252 aa10.14□□□□□ -0.79
GEN1-207ENST00000534669 IP6K1Q92551 441 aa10.14□□□□□ -0.79
GEN1-207ENST00000534669 CARD11Q9BXL7 1154 aa10.14□□□□□ -0.79
GEN1-207ENST00000534669 MAP3K19Q56UN5 1328 aa10.13□□□□□ -0.79
GEN1-207ENST00000534669 TAF1LQ8IZX4 1826 aa10.13□□□□□ -0.79
GEN1-207ENST00000534669 PRIM1P49642 420 aaKnown RBP10.13□□□□□ -0.79
GEN1-207ENST00000534669 GOLGA2Q08379 1002 aa10.13□□□□□ -0.79
GEN1-207ENST00000534669 HDGFL2Q7Z4V5 671 aaPredicted RBP10.13□□□□□ -0.79
GEN1-207ENST00000534669 TOGARAM1Q9Y4F4 1720 aa10.13□□□□□ -0.79
GEN1-207ENST00000534669 ANKRD36BQ8N2N9 1353 aa10.13□□□□□ -0.79
GEN1-207ENST00000534669 C5P01031 1676 aa10.12□□□□□ -0.79
GEN1-207ENST00000534669 YBX3P16989 372 aaKnown RBP eCLIP10.12□□□□□ -0.79
GEN1-207ENST00000534669 HOXC9P31274 260 aa10.12□□□□□ -0.79
GEN1-207ENST00000534669 GPR162Q16538 588 aa10.12□□□□□ -0.79
GEN1-207ENST00000534669 SLC27A3Q5K4L6 730 aa10.12□□□□□ -0.79
GEN1-207ENST00000534669 OCEL1Q9H607 264 aa10.12□□□□□ -0.79
GEN1-207ENST00000534669 SCUBE2Q9NQ36 999 aa10.12□□□□□ -0.79
GEN1-207ENST00000534669 USHBP1Q8N6Y0 703 aa10.11□□□□□ -0.79
GEN1-207ENST00000534669 SYTL4Q96C24 671 aaPredicted RBP10.11□□□□□ -0.79
GEN1-207ENST00000534669 TESK2Q96S53 571 aa10.11□□□□□ -0.79
GEN1-207ENST00000534669 ITGB4P16144 1822 aa10.11□□□□□ -0.79
GEN1-207ENST00000534669 MKRN3Q13064 507 aaKnown RBP10.1□□□□□ -0.79
GEN1-207ENST00000534669 MSL1Q68DK7 614 aa10.1□□□□□ -0.79
GEN1-207ENST00000534669 COL23A1Q86Y22 540 aaPredicted RBP10.1□□□□□ -0.79
GEN1-207ENST00000534669 SLC16A10Q8TF71 515 aa10.1□□□□□ -0.79
GEN1-207ENST00000534669 TFCP2L1Q9NZI6 479 aa10.1□□□□□ -0.79
GEN1-207ENST00000534669 RIOK3O14730 519 aaKnown RBP10.09□□□□□ -0.79
GEN1-207ENST00000534669 TRIM26Q12899 539 aaPredicted RBP10.09□□□□□ -0.79
GEN1-207ENST00000534669 RRS1Q15050 365 aaKnown RBP10.09□□□□□ -0.79
GEN1-207ENST00000534669 NBPF6Q5VWK0 638 aa10.09□□□□□ -0.79
GEN1-207ENST00000534669 AMIGO3Q86WK7 504 aa10.09□□□□□ -0.79
GEN1-207ENST00000534669 NBPF4Q96M43 638 aa10.09□□□□□ -0.79
GEN1-207ENST00000534669 TERF2IPQ9NYB0 399 aa10.09□□□□□ -0.79
GEN1-207ENST00000534669 CCNL1Q9UK58 526 aaPredicted RBP10.09□□□□□ -0.79
GEN1-207ENST00000534669 KIF20BQ96Q89 1820 aa10.09□□□□□ -0.79
GEN1-207ENST00000534669 POLD1P28340 1107 aa10.08□□□□□ -0.8
GEN1-207ENST00000534669 SMIM5Q71RC9 77 aa10.08□□□□□ -0.8
GEN1-207ENST00000534669 ZCRB1Q8TBF4 217 aaKnown RBP10.08□□□□□ -0.8
GEN1-207ENST00000534669 UBR3Q6ZT12 1888 aa10.08□□□□□ -0.8
GEN1-207ENST00000534669 ST20-MTHFSA0A0A6YYL1 179 aa10.07□□□□□ -0.8
GEN1-207ENST00000534669 GIGYF1O75420 1035 aaPredicted RBP10.07□□□□□ -0.8
GEN1-207ENST00000534669 AMPHP49418 695 aa10.07□□□□□ -0.8
GEN1-207ENST00000534669 RNF25Q96BH1 459 aaPredicted RBP10.07□□□□□ -0.8
GEN1-207ENST00000534669 COG3Q96JB2 828 aa10.07□□□□□ -0.8
GEN1-207ENST00000534669 MAP2P11137 1827 aaKnown RBP10.07□□□□□ -0.8
GEN1-207ENST00000534669 C4BP0C0L5 1744 aa10.07□□□□□ -0.8
GEN1-207ENST00000534669 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
GEN1-207ENST00000534669 PUS7Q96PZ0 661 aaKnown RBP10.06□□□□□ -0.8
GEN1-207ENST00000534669 GGNBP2Q9H3C7 697 aa10.06□□□□□ -0.8
GEN1-207ENST00000534669 ATP10DQ9P241 1426 aa10.06□□□□□ -0.8
GEN1-207ENST00000534669 RTL1A6NKG5 1358 aa10.05□□□□□ -0.8
GEN1-207ENST00000534669 USP47Q96K76 1375 aa10.05□□□□□ -0.8
GEN1-207ENST00000534669 FYB1O15117 783 aa10.05□□□□□ -0.8
GEN1-207ENST00000534669 CEP350Q5VT06 3117 aa10.05□□□□□ -0.8
GEN1-207ENST00000534669 TONSLQ96HA7 1378 aa10.04□□□□□ -0.8
GEN1-207ENST00000534669 CYP27B1O15528 508 aa10.04□□□□□ -0.8
GEN1-207ENST00000534669 HSP90AB2PQ58FF8 381 aa10.04□□□□□ -0.8
GEN1-207ENST00000534669 TAOK2Q9UL54 1235 aa10.04□□□□□ -0.8
GEN1-207ENST00000534669 WWC3Q9ULE0 1092 aa10.04□□□□□ -0.8
GEN1-207ENST00000534669 ADCY9O60503 1353 aa10.03□□□□□ -0.8
GEN1-207ENST00000534669 PALLDQ8WX93 1383 aa10.03□□□□□ -0.8
GEN1-207ENST00000534669 PDCD7Q8N8D1 485 aaKnown RBP10.03□□□□□ -0.8
GEN1-207ENST00000534669 PCGF6Q9BYE7 350 aa10.03□□□□□ -0.8
GEN1-207ENST00000534669 KIAA1551Q9HCM1 1747 aa10.03□□□□□ -0.8
GEN1-207ENST00000534669 ANKRD26Q9UPS8 1709 aa10.03□□□□□ -0.8
GEN1-207ENST00000534669 INSRP06213 1382 aa10.02□□□□□ -0.8
GEN1-207ENST00000534669 MPRIPQ6WCQ1 1025 aa10.02□□□□□ -0.81
GEN1-207ENST00000534669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.02□□□□□ -0.812e-8■■■□□ 15.9
GEN1-207ENST00000534669 NCAPD2Q15021 1401 aa10.01□□□□□ -0.81
GEN1-207ENST00000534669 ECM2O94769 699 aaPredicted RBP10.01□□□□□ -0.81
GEN1-207ENST00000534669 TATP17735 454 aaPredicted RBP10.01□□□□□ -0.81
GEN1-207ENST00000534669 RAPGEF4Q8WZA2 1011 aa10.01□□□□□ -0.81
GEN1-207ENST00000534669 CARD14Q9BXL6 1004 aa10.01□□□□□ -0.81
GEN1-207ENST00000534669 SMG6Q86US8 1419 aaKnown RBP10□□□□□ -0.81
GEN1-207ENST00000534669 GRIN3BO60391 1043 aa10□□□□□ -0.81
GEN1-207ENST00000534669 PHF14O94880 888 aa10□□□□□ -0.81
GEN1-207ENST00000534669 ZNF526Q8TF50 670 aaPredicted RBP10□□□□□ -0.81
GEN1-207ENST00000534669 PIGBQ92521 554 aa10□□□□□ -0.81
GEN1-207ENST00000534669 EMILIN1Q9Y6C2 1016 aa10□□□□□ -0.81
GEN1-207ENST00000534669 N4BP2Q86UW6 1770 aaPredicted RBP10□□□□□ -0.81
GEN1-207ENST00000534669 CGNL1Q0VF96 1302 aa10□□□□□ -0.81
GEN1-207ENST00000534669 PCDH11XQ9BZA7 1347 aa10□□□□□ -0.81
GEN1-207ENST00000534669 PCDH11YQ9BZA8 1340 aa10□□□□□ -0.81
GEN1-207ENST00000534669 KIF13BQ9NQT8 1826 aa10□□□□□ -0.81
GEN1-207ENST00000534669 FLT4P35916 1363 aa10□□□□□ -0.81
GEN1-207ENST00000534669 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.99□□□□□ -0.81
GEN1-207ENST00000534669 LINC00116Q8NCU8 138 aa9.99□□□□□ -0.81
GEN1-207ENST00000534669 ZFP91Q96JP5 570 aaPredicted RBP9.99□□□□□ -0.81
GEN1-207ENST00000534669 CD2APQ9Y5K6 639 aa9.99□□□□□ -0.81
GEN1-207ENST00000534669 CICQ96RK0 1608 aaPredicted RBP9.98□□□□□ -0.81
GEN1-207ENST00000534669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.98□□□□□ -0.81
GEN1-207ENST00000534669 ITPK1Q13572 414 aa9.98□□□□□ -0.81
GEN1-207ENST00000534669 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
GEN1-207ENST00000534669 L3MBTL3Q96JM7 780 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms