RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 ZSCAN29Q8IWY8 852 aaPredicted RBP5.47□□□□□ -1.53
ME3-211ENST00000534638 TPCN2Q8NHX9 752 aa5.47□□□□□ -1.53
ME3-211ENST00000534638 FAM161BQ96MY7 647 aa5.47□□□□□ -1.53
ME3-211ENST00000534638 PURBQ96QR8 312 aaKnown RBP5.47□□□□□ -1.53
ME3-211ENST00000534638 DNAJC2Q99543 621 aaKnown RBP5.47□□□□□ -1.53
ME3-211ENST00000534638 NOD1Q9Y239 953 aa5.47□□□□□ -1.53
ME3-211ENST00000534638 ATP1A2P50993 1020 aa5.46□□□□□ -1.54
ME3-211ENST00000534638 SEC13P55735 322 aa5.46□□□□□ -1.54
ME3-211ENST00000534638 GTF2IP78347 998 aa5.46□□□□□ -1.54
ME3-211ENST00000534638 PSME1Q06323 249 aa5.46□□□□□ -1.54
ME3-211ENST00000534638 NBPF14Q5TI25 921 aa5.46□□□□□ -1.54
ME3-211ENST00000534638 DPH6Q7L8W6 267 aa5.46□□□□□ -1.54
ME3-211ENST00000534638 BPHLQ86WA6 291 aaPredicted RBP5.46□□□□□ -1.54
ME3-211ENST00000534638 SIX5Q8N196 739 aa5.46□□□□□ -1.54
ME3-211ENST00000534638 CCDC85AQ96PX6 553 aaPredicted RBP5.46□□□□□ -1.54
ME3-211ENST00000534638 RNF19AQ9NV58 838 aa5.46□□□□□ -1.54
ME3-211ENST00000534638 DOLKQ9UPQ8 538 aa5.46□□□□□ -1.54
ME3-211ENST00000534638 ZC3H4Q9UPT8 1303 aaKnown RBP5.46□□□□□ -1.54
ME3-211ENST00000534638 ANKRD62A6NC57 917 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 ST8SIA5O15466 376 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 AVPP01185 164 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 CANXP27824 592 aaKnown RBP5.45□□□□□ -1.54
ME3-211ENST00000534638 RAD51AP2Q09MP3 1159 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 FKBP5Q13451 457 aaPredicted RBP5.45□□□□□ -1.54
ME3-211ENST00000534638 MRPL58Q14197 206 aaKnown RBP5.45□□□□□ -1.54
ME3-211ENST00000534638 NAA30Q147X3 362 aaPredicted RBP5.45□□□□□ -1.54
ME3-211ENST00000534638 C4orf48Q5BLP8 95 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 CCDC102BQ68D86 513 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 RGL4Q8IZJ4 473 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 LARGE2Q8N3Y3 721 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 ADAM32Q8TC27 787 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 PIK3R5Q8WYR1 880 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 GPKOWQ92917 476 aaPredicted RBP eCLIP5.45□□□□□ -1.54
ME3-211ENST00000534638 HINFPQ9BQA5 517 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 POLR3GLQ9BT43 218 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 CWC22Q9HCG8 908 aaKnown RBP5.45□□□□□ -1.54
ME3-211ENST00000534638 TLL2Q9Y6L7 1015 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 WASF2Q9Y6W5 498 aa5.45□□□□□ -1.54
ME3-211ENST00000534638 CADPSQ9ULU8 1353 aa5.44□□□□□ -1.54
ME3-211ENST00000534638 SCAMP3O14828 347 aaKnown RBP5.44□□□□□ -1.54
ME3-211ENST00000534638 AXIN1O15169 862 aa5.44□□□□□ -1.54
ME3-211ENST00000534638 FKBP4Q02790 459 aaKnown RBP eCLIP5.44□□□□□ -1.54
ME3-211ENST00000534638 PTK2Q05397 1052 aa5.44□□□□□ -1.54
ME3-211ENST00000534638 MAP7D1Q3KQU3 841 aa5.44□□□□□ -1.54
ME3-211ENST00000534638 LDLRAD1Q5T700 205 aa5.44□□□□□ -1.54
ME3-211ENST00000534638 ZNF662Q6ZS27 426 aa5.44□□□□□ -1.54
ME3-211ENST00000534638 SH3BP5LQ7L8J4 393 aa5.44□□□□□ -1.54
ME3-211ENST00000534638 DHX38Q92620 1227 aaKnown RBP5.44□□□□□ -1.54
ME3-211ENST00000534638 HPS1Q92902 700 aa5.44□□□□□ -1.54
ME3-211ENST00000534638 TANGO6Q9C0B7 1094 aa5.44□□□□□ -1.54
ME3-211ENST00000534638 AAASQ9NRG9 546 aa5.44□□□□□ -1.54
ME3-211ENST00000534638 CHIC2Q9UKJ5 165 aa5.44□□□□□ -1.54
ME3-211ENST00000534638 RBM19Q9Y4C8 960 aaKnown RBP5.44□□□□□ -1.54
ME3-211ENST00000534638 MAGEB6P1A0A0J9YX57 407 aa5.43□□□□□ -1.54
ME3-211ENST00000534638 LZTS3O60299 673 aaPredicted RBP5.43□□□□□ -1.54
ME3-211ENST00000534638 ARID5BQ14865 1188 aa5.43□□□□□ -1.54
ME3-211ENST00000534638 CTC1Q2NKJ3 1217 aa5.43□□□□□ -1.54
ME3-211ENST00000534638 PDXDC2PQ6P474 469 aa5.43□□□□□ -1.54
ME3-211ENST00000534638 TMC7Q7Z402 723 aa5.43□□□□□ -1.54
ME3-211ENST00000534638 SH3RF1Q7Z6J0 888 aa5.43□□□□□ -1.54
ME3-211ENST00000534638 NT5DC4Q86YG4 428 aa5.43□□□□□ -1.54
ME3-211ENST00000534638 CRIPAKQ8N1N5 446 aa5.43□□□□□ -1.54
ME3-211ENST00000534638 MPNDQ8N594 471 aa5.43□□□□□ -1.54
ME3-211ENST00000534638 TSEN2Q8NCE0 465 aaKnown RBP5.43□□□□□ -1.54
ME3-211ENST00000534638 HIRIP3Q9BW71 556 aaPredicted RBP5.43□□□□□ -1.54
ME3-211ENST00000534638 BCL11AQ9H165 835 aa5.43□□□□□ -1.54
ME3-211ENST00000534638 BRPF3Q9ULD4 1205 aa5.43□□□□□ -1.54
ME3-211ENST00000534638 IQSEC3Q9UPP2 1182 aaPredicted RBP5.43□□□□□ -1.54
ME3-211ENST00000534638 SMCPP49901 116 aaPredicted RBP5.42□□□□□ -1.54
ME3-211ENST00000534638 TMEM87AQ8NBN3 555 aa5.42□□□□□ -1.54
ME3-211ENST00000534638 ARHGAP9Q9BRR9 750 aa5.42□□□□□ -1.54
ME3-211ENST00000534638 TINF2Q9BSI4 451 aa5.42□□□□□ -1.54
ME3-211ENST00000534638 C1QTNF2Q9BXJ5 285 aa5.42□□□□□ -1.54
ME3-211ENST00000534638 CARD14Q9BXL6 1004 aa5.42□□□□□ -1.54
ME3-211ENST00000534638 LNPKQ9C0E8 428 aa5.42□□□□□ -1.54
ME3-211ENST00000534638 DACH1Q9UI36 760 aa5.42□□□□□ -1.54
ME3-211ENST00000534638 NCLP19338 710 aaKnown RBP5.41□□□□□ -1.54
ME3-211ENST00000534638 MAPK8P45983 427 aa5.41□□□□□ -1.54
ME3-211ENST00000534638 SF3B2Q13435 895 aaKnown RBP5.41□□□□□ -1.54
ME3-211ENST00000534638 ZNF787Q6DD87 383 aa5.41□□□□□ -1.54
ME3-211ENST00000534638 METTL16Q86W50 562 aaKnown RBP5.41□□□□□ -1.54
ME3-211ENST00000534638 ANKRD13AQ8IZ07 590 aa5.41□□□□□ -1.54
ME3-211ENST00000534638 CDK15Q96Q40 435 aa5.41□□□□□ -1.54
ME3-211ENST00000534638 SETDB2Q96T68 719 aa5.41□□□□□ -1.54
ME3-211ENST00000534638 CAPN10Q9HC96 672 aa5.41□□□□□ -1.54
ME3-211ENST00000534638 GIGYF1O75420 1035 aaPredicted RBP5.4□□□□□ -1.54
ME3-211ENST00000534638 ADH1CP00326 375 aa5.4□□□□□ -1.54
ME3-211ENST00000534638 MPSTP25325 297 aa5.4□□□□□ -1.54
ME3-211ENST00000534638 GTF2F1P35269 517 aaKnown RBP eCLIP5.4□□□□□ -1.54
ME3-211ENST00000534638 TNNI2P48788 182 aa5.4□□□□□ -1.54
ME3-211ENST00000534638 NNTQ13423 1086 aa5.4□□□□□ -1.54
ME3-211ENST00000534638 COL19A1Q14993 1142 aa5.4□□□□□ -1.54
ME3-211ENST00000534638 ERFEQ4G0M1 354 aa5.4□□□□□ -1.54
ME3-211ENST00000534638 ZBTB33Q86T24 672 aa5.4□□□□□ -1.54
ME3-211ENST00000534638 DZIP3Q86Y13 1208 aaKnown RBP5.4□□□□□ -1.54
ME3-211ENST00000534638 DUSP9Q99956 384 aaKnown RBP5.4□□□□□ -1.54
ME3-211ENST00000534638 PARP2Q9UGN5 583 aa5.4□□□□□ -1.54
ME3-211ENST00000534638 GPSM3Q9Y4H4 160 aa5.4□□□□□ -1.54
ME3-211ENST00000534638 PCDHGA11Q9Y5H2 935 aa5.4□□□□□ -1.54
ME3-211ENST00000534638 LDHBP07195 334 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms