RNA–Protein interactions for RNA: ENST00000534614.1

CELF1-217, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-217ENST00000534614 ARFGEF1Q9Y6D6 1849 aa13.29□□□□□ -0.28
CELF1-217ENST00000534614 N4BP2Q86UW6 1770 aaPredicted RBP13.28□□□□□ -0.28
CELF1-217ENST00000534614 SLC4A9Q96Q91 983 aa13.28□□□□□ -0.28
CELF1-217ENST00000534614 ASAP1Q9ULH1 1129 aa13.28□□□□□ -0.28
CELF1-217ENST00000534614 KDM6AO15550 1401 aaPredicted RBP13.28□□□□□ -0.28
CELF1-217ENST00000534614 IFNL2Q8IZJ0 200 aa13.27□□□□□ -0.29
CELF1-217ENST00000534614 ATG3Q9NT62 314 aa13.27□□□□□ -0.29
CELF1-217ENST00000534614 TMOD3Q9NYL9 352 aa13.27□□□□□ -0.29
CELF1-217ENST00000534614 TJP1Q07157 1748 aa13.27□□□□□ -0.29
CELF1-217ENST00000534614 KIF3CO14782 793 aa13.26□□□□□ -0.29
CELF1-217ENST00000534614 PHF14O94880 888 aa13.26□□□□□ -0.29
CELF1-217ENST00000534614 HSPA6P17066 643 aa13.26□□□□□ -0.29
CELF1-217ENST00000534614 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
CELF1-217ENST00000534614 IFFO2Q5TF58 517 aa13.26□□□□□ -0.29
CELF1-217ENST00000534614 CNTNAP4Q9C0A0 1308 aa13.26□□□□□ -0.29
CELF1-217ENST00000534614 GPBP1L1Q9HC44 474 aaPredicted RBP13.26□□□□□ -0.29
CELF1-217ENST00000534614 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
CELF1-217ENST00000534614 GNPATO15228 680 aa13.25□□□□□ -0.29
CELF1-217ENST00000534614 SCN11AQ9UI33 1791 aa13.25□□□□□ -0.29
CELF1-217ENST00000534614 ERVV-2B6SEH9 535 aa13.24□□□□□ -0.29
CELF1-217ENST00000534614 MMP10P09238 476 aa13.24□□□□□ -0.29
CELF1-217ENST00000534614 ADRA2BP18089 450 aa13.24□□□□□ -0.29
CELF1-217ENST00000534614 RC3H1Q5TC82 1133 aaKnown RBP13.24□□□□□ -0.29
CELF1-217ENST00000534614 ATP6V1AP38606 617 aa13.23□□□□□ -0.29
CELF1-217ENST00000534614 MRC1P22897 1456 aa13.23□□□□□ -0.29
CELF1-217ENST00000534614 CLSPNQ9HAW4 1339 aa13.22□□□□□ -0.29
CELF1-217ENST00000534614 TGFB2P61812 414 aa13.22□□□□□ -0.29
CELF1-217ENST00000534614 PPM1GO15355 546 aaPredicted RBP13.21□□□□□ -0.29
CELF1-217ENST00000534614 GYS1P13807 737 aa13.21□□□□□ -0.29
CELF1-217ENST00000534614 DCAF5Q96JK2 942 aa13.21□□□□□ -0.29
CELF1-217ENST00000534614 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
CELF1-217ENST00000534614 NRXN2Q9P2S2 1712 aa13.2□□□□□ -0.3
CELF1-217ENST00000534614 RPS6KA4O75676 772 aa13.2□□□□□ -0.3
CELF1-217ENST00000534614 HSP90AB1P08238 724 aaKnown RBP13.2□□□□□ -0.3
CELF1-217ENST00000534614 NLGN1Q8N2Q7 840 aa13.2□□□□□ -0.3
CELF1-217ENST00000534614 RTCBQ9Y3I0 505 aaKnown RBP13.2□□□□□ -0.3
CELF1-217ENST00000534614 SBF1O95248 1867 aa13.19□□□□□ -0.3
CELF1-217ENST00000534614 ARHGEF1Q92888 912 aaKnown RBP13.19□□□□□ -0.3
CELF1-217ENST00000534614 DLEC1Q9Y238 1755 aa13.19□□□□□ -0.3
CELF1-217ENST00000534614 WDR90Q96KV7 1748 aa13.19□□□□□ -0.3
CELF1-217ENST00000534614 KCNA3P22001 575 aa13.18□□□□□ -0.3
CELF1-217ENST00000534614 TRAPPC3LQ5T215 181 aa13.18□□□□□ -0.3
CELF1-217ENST00000534614 WWC3Q9ULE0 1092 aa13.18□□□□□ -0.3
CELF1-217ENST00000534614 AMOTQ4VCS5 1084 aa13.17□□□□□ -0.3
CELF1-217ENST00000534614 ZNF526Q8TF50 670 aaPredicted RBP13.17□□□□□ -0.3
CELF1-217ENST00000534614 UBR2Q8IWV8 1755 aa13.17□□□□□ -0.3
CELF1-217ENST00000534614 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
CELF1-217ENST00000534614 AFDNP55196 1824 aaKnown RBP13.16□□□□□ -0.3
CELF1-217ENST00000534614 TNRC6CQ9HCJ0 1690 aaKnown RBP13.16□□□□□ -0.3
CELF1-217ENST00000534614 TRIM26Q12899 539 aaPredicted RBP13.16□□□□□ -0.3
CELF1-217ENST00000534614 PLEKHO1Q53GL0 409 aaPredicted RBP13.16□□□□□ -0.3
CELF1-217ENST00000534614 ZNF530Q6P9A1 599 aaPredicted RBP13.16□□□□□ -0.3
CELF1-217ENST00000534614 CCDC87Q9NVE4 849 aa13.16□□□□□ -0.3
CELF1-217ENST00000534614 KCPQ6ZWJ8 1503 aa13.16□□□□□ -0.3
CELF1-217ENST00000534614 A0A0G2JLW4 131 aa13.15□□□□□ -0.3
CELF1-217ENST00000534614 DPEP1P16444 411 aa13.15□□□□□ -0.3
CELF1-217ENST00000534614 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.3
CELF1-217ENST00000534614 TOMM70O94826 608 aa13.14□□□□□ -0.31
CELF1-217ENST00000534614 CRKLP46109 303 aaKnown RBP13.14□□□□□ -0.31
CELF1-217ENST00000534614 DDR1Q08345 913 aa13.14□□□□□ -0.31
CELF1-217ENST00000534614 DNAJC5GQ8N7S2 189 aa13.14□□□□□ -0.31
CELF1-217ENST00000534614 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
CELF1-217ENST00000534614 BCS1LQ9Y276 419 aa13.14□□□□□ -0.31
CELF1-217ENST00000534614 APLP1P51693 650 aa13.13□□□□□ -0.31
CELF1-217ENST00000534614 IL13P35225 146 aa13.12□□□□□ -0.31
CELF1-217ENST00000534614 RFC4P35249 363 aa13.12□□□□□ -0.31
CELF1-217ENST00000534614 TNNT2P45379 298 aaPredicted RBP13.12□□□□□ -0.31
CELF1-217ENST00000534614 CABP4P57796 275 aa13.12□□□□□ -0.31
CELF1-217ENST00000534614 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
CELF1-217ENST00000534614 PANK3Q9H999 370 aa13.12□□□□□ -0.31
CELF1-217ENST00000534614 NMRK2Q9NPI5 230 aa13.12□□□□□ -0.31
CELF1-217ENST00000534614 PARP3Q9Y6F1 533 aa13.12□□□□□ -0.31
CELF1-217ENST00000534614 POLRMTO00411 1230 aaKnown RBP13.11□□□□□ -0.31
CELF1-217ENST00000534614 HSPA5P11021 654 aaKnown RBP13.11□□□□□ -0.31
CELF1-217ENST00000534614 TM4SF1P30408 202 aa13.11□□□□□ -0.31
CELF1-217ENST00000534614 FKBP8Q14318 412 aa13.11□□□□□ -0.31
CELF1-217ENST00000534614 RBM46Q8TBY0 533 aaKnown RBP13.11□□□□□ -0.31
CELF1-217ENST00000534614 SRP68Q9UHB9 627 aaKnown RBP13.11□□□□□ -0.31
CELF1-217ENST00000534614 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
CELF1-217ENST00000534614 SIPA1L3O60292 1781 aaPredicted RBP13.1□□□□□ -0.31
CELF1-217ENST00000534614 SCN7AQ01118 1682 aa13.1□□□□□ -0.31
CELF1-217ENST00000534614 FCHSD2O94868 740 aa13.1□□□□□ -0.31
CELF1-217ENST00000534614 MTHFSP49914 203 aa13.1□□□□□ -0.31
CELF1-217ENST00000534614 NFATC2IPQ8NCF5 419 aa13.1□□□□□ -0.31
CELF1-217ENST00000534614 PTCD1O75127 700 aaKnown RBP13.09□□□□□ -0.31
CELF1-217ENST00000534614 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
CELF1-217ENST00000534614 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
CELF1-217ENST00000534614 C1orf141Q5JVX7 400 aa13.09□□□□□ -0.31
CELF1-217ENST00000534614 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
CELF1-217ENST00000534614 ARHGAP27Q6ZUM4 889 aa13.09□□□□□ -0.31
CELF1-217ENST00000534614 TIAM2Q8IVF5 1701 aa13.09□□□□□ -0.31
CELF1-217ENST00000534614 ANKRD31Q8N7Z5 1873 aa13.09□□□□□ -0.31
CELF1-217ENST00000534614 PIM2Q9P1W9 311 aa13.09□□□□□ -0.31
CELF1-217ENST00000534614 COL3A1P02461 1466 aaPredicted RBP13.09□□□□□ -0.31
CELF1-217ENST00000534614 ZC3H4Q9UPT8 1303 aaKnown RBP13.09□□□□□ -0.31
CELF1-217ENST00000534614 AKAP4Q5JQC9 854 aa13.08□□□□□ -0.32
CELF1-217ENST00000534614 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
CELF1-217ENST00000534614 SLC52A2Q9HAB3 445 aa13.08□□□□□ -0.32
CELF1-217ENST00000534614 CYP19A1P11511 503 aaPredicted RBP13.07□□□□□ -0.32
CELF1-217ENST00000534614 DALRD3Q5D0E6 543 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms