RNA–Protein interactions for RNA: ENST00000534484.1

LMO1-204, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LMO1, Length 770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-204ENST00000534484 COL5A2P05997 1499 aaPredicted RBP17.09■□□□□ 0.33
LMO1-204ENST00000534484 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.32
LMO1-204ENST00000534484 PDE4AP27815 886 aa17.08■□□□□ 0.32
LMO1-204ENST00000534484 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.32
LMO1-204ENST00000534484 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
LMO1-204ENST00000534484 PXDNLA1KZ92 1463 aa17.07■□□□□ 0.32
LMO1-204ENST00000534484 PLEKHG5O94827 1062 aa17.07■□□□□ 0.32
LMO1-204ENST00000534484 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
LMO1-204ENST00000534484 TEFQ10587 303 aa17.07■□□□□ 0.32
LMO1-204ENST00000534484 CHRNA2Q15822 529 aa17.07■□□□□ 0.32
LMO1-204ENST00000534484 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
LMO1-204ENST00000534484 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
LMO1-204ENST00000534484 PHKG2P15735 406 aa17.05■□□□□ 0.32
LMO1-204ENST00000534484 MPRIPQ6WCQ1 1025 aa17.05■□□□□ 0.32
LMO1-204ENST00000534484 SKAP1Q86WV1 359 aa17.05■□□□□ 0.32
LMO1-204ENST00000534484 PRDM11Q9NQV5 511 aa17.05■□□□□ 0.32
LMO1-204ENST00000534484 COL14A1Q05707 1796 aaKnown RBP17.05■□□□□ 0.32
LMO1-204ENST00000534484 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
LMO1-204ENST00000534484 PDZRN3Q9UPQ7 1066 aa17.04■□□□□ 0.32
LMO1-204ENST00000534484 SHANK3Q9BYB0 1731 aa17.04■□□□□ 0.32
LMO1-204ENST00000534484 BTBD11A6QL63 1104 aa17.03■□□□□ 0.32
LMO1-204ENST00000534484 G2E3Q7L622 706 aa17.03■□□□□ 0.32
LMO1-204ENST00000534484 IFNL2Q8IZJ0 200 aa17.03■□□□□ 0.32
LMO1-204ENST00000534484 CCT4P50991 539 aaKnown RBP17.02■□□□□ 0.32
LMO1-204ENST00000534484 CARD10Q9BWT7 1032 aa17.02■□□□□ 0.32
LMO1-204ENST00000534484 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
LMO1-204ENST00000534484 FLIIQ13045 1269 aa17.01■□□□□ 0.31
LMO1-204ENST00000534484 FAM161AQ3B820 660 aa17.01■□□□□ 0.31
LMO1-204ENST00000534484 DCAF5Q96JK2 942 aa17.01■□□□□ 0.31
LMO1-204ENST00000534484 SLC52A2Q9HAB3 445 aa17.01■□□□□ 0.31
LMO1-204ENST00000534484 ATP10DQ9P241 1426 aa17.01■□□□□ 0.31
LMO1-204ENST00000534484 COL16A1Q07092 1604 aaPredicted RBP17■□□□□ 0.31
LMO1-204ENST00000534484 C8orf34Q49A92 452 aa17■□□□□ 0.31
LMO1-204ENST00000534484 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
LMO1-204ENST00000534484 GCC1Q96CN9 775 aa17■□□□□ 0.31
LMO1-204ENST00000534484 CYP27B1O15528 508 aa16.99■□□□□ 0.31
LMO1-204ENST00000534484 KCNQ3O43525 872 aa16.99■□□□□ 0.31
LMO1-204ENST00000534484 RGS3P49796 1198 aa16.99■□□□□ 0.31
LMO1-204ENST00000534484 SIRT2Q8IXJ6 389 aa16.99■□□□□ 0.31
LMO1-204ENST00000534484 RPAP2Q8IXW5 612 aaPredicted RBP16.99■□□□□ 0.31
LMO1-204ENST00000534484 PLCH1Q4KWH8 1693 aa16.99■□□□□ 0.31
LMO1-204ENST00000534484 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
LMO1-204ENST00000534484 NUCB1Q02818 461 aa16.98■□□□□ 0.31
LMO1-204ENST00000534484 NKX1-1Q15270 411 aaPredicted RBP16.98■□□□□ 0.31
LMO1-204ENST00000534484 C5P01031 1676 aa16.97■□□□□ 0.31
LMO1-204ENST00000534484 PAPPAQ13219 1627 aa16.97■□□□□ 0.31
LMO1-204ENST00000534484 ANKRD44Q8N8A2 993 aa16.97■□□□□ 0.31
LMO1-204ENST00000534484 GLI3P10071 1580 aa16.97■□□□□ 0.31
LMO1-204ENST00000534484 UBR2Q8IWV8 1755 aa16.97■□□□□ 0.31
LMO1-204ENST00000534484 PHLPP1O60346 1717 aa16.96■□□□□ 0.31
LMO1-204ENST00000534484 TOM1L2Q6ZVM7 507 aa16.96■□□□□ 0.31
LMO1-204ENST00000534484 LAMB4A4D0S4 1761 aa16.96■□□□□ 0.31
LMO1-204ENST00000534484 WNK3Q9BYP7 1800 aa16.96■□□□□ 0.3
LMO1-204ENST00000534484 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.3
LMO1-204ENST00000534484 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.3
LMO1-204ENST00000534484 IBTKQ9P2D0 1353 aaPredicted RBP16.95■□□□□ 0.3
LMO1-204ENST00000534484 ZNF790Q6PG37 636 aa16.95■□□□□ 0.3
LMO1-204ENST00000534484 ZCRB1Q8TBF4 217 aaKnown RBP16.95■□□□□ 0.3
LMO1-204ENST00000534484 IL2RBP14784 551 aa16.94■□□□□ 0.3
LMO1-204ENST00000534484 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
LMO1-204ENST00000534484 MEIS3Q99687 375 aa16.94■□□□□ 0.3
LMO1-204ENST00000534484 DCTPP1Q9H773 170 aa16.94■□□□□ 0.3
LMO1-204ENST00000534484 DBF4Q9UBU7 674 aaPredicted RBP16.94■□□□□ 0.3
LMO1-204ENST00000534484 F6X3S4 739 aa16.93■□□□□ 0.3
LMO1-204ENST00000534484 CEP85Q6P2H3 762 aa16.93■□□□□ 0.3
LMO1-204ENST00000534484 C1orf115Q9H7X2 142 aa16.93■□□□□ 0.3
LMO1-204ENST00000534484 DISP2A7MBM2 1401 aa16.93■□□□□ 0.3
LMO1-204ENST00000534484 NRAPQ86VF7 1730 aa16.93■□□□□ 0.3
LMO1-204ENST00000534484 ERVV-2B6SEH9 535 aa16.92■□□□□ 0.3
LMO1-204ENST00000534484 GNAI3P08754 354 aa16.92■□□□□ 0.3
LMO1-204ENST00000534484 LARP1Q6PKG0 1096 aaKnown RBP16.92■□□□□ 0.3
LMO1-204ENST00000534484 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
LMO1-204ENST00000534484 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
LMO1-204ENST00000534484 NFATC2IPQ8NCF5 419 aa16.91■□□□□ 0.3
LMO1-204ENST00000534484 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
LMO1-204ENST00000534484 PHAXQ9H814 394 aaKnown RBP16.91■□□□□ 0.3
LMO1-204ENST00000534484 TOGARAM1Q9Y4F4 1720 aa16.9■□□□□ 0.3
LMO1-204ENST00000534484 LRP6O75581 1613 aa16.9■□□□□ 0.3
LMO1-204ENST00000534484 EIF2S2P20042 333 aaKnown RBP16.9■□□□□ 0.3
LMO1-204ENST00000534484 EVA1CP58658 441 aa16.9■□□□□ 0.3
LMO1-204ENST00000534484 DDX21Q9NR30 783 aaKnown RBP eCLIP16.9■□□□□ 0.3
LMO1-204ENST00000534484 HYPKQ9NX55 129 aa16.9■□□□□ 0.3
LMO1-204ENST00000534484 ADCY9O60503 1353 aa16.89■□□□□ 0.3
LMO1-204ENST00000534484 GNAI2P04899 355 aa16.89■□□□□ 0.29
LMO1-204ENST00000534484 ANP32AP39687 249 aaKnown RBP16.89■□□□□ 0.29
LMO1-204ENST00000534484 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
LMO1-204ENST00000534484 NWD2Q9ULI1 1742 aa16.89■□□□□ 0.29
LMO1-204ENST00000534484 CABP4P57796 275 aa16.88■□□□□ 0.29
LMO1-204ENST00000534484 PDIA6Q15084 440 aa16.88■□□□□ 0.29
LMO1-204ENST00000534484 DNAAF4Q8WXU2 420 aa16.88■□□□□ 0.29
LMO1-204ENST00000534484 TNS2Q63HR2 1409 aa16.87■□□□□ 0.29
LMO1-204ENST00000534484 KCPQ6ZWJ8 1503 aa16.87■□□□□ 0.29
LMO1-204ENST00000534484 HMMRO75330 724 aa16.87■□□□□ 0.29
LMO1-204ENST00000534484 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
LMO1-204ENST00000534484 ZNF496Q96IT1 587 aaPredicted RBP16.87■□□□□ 0.29
LMO1-204ENST00000534484 USP44Q9H0E7 712 aa16.87■□□□□ 0.29
LMO1-204ENST00000534484 BTG4Q9NY30 223 aa16.87■□□□□ 0.29
LMO1-204ENST00000534484 ALDH1L1O75891 902 aa16.86■□□□□ 0.29
LMO1-204ENST00000534484 SNRPA1P09661 255 aaKnown RBP16.86■□□□□ 0.29
LMO1-204ENST00000534484 SLC39A6Q13433 755 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms