RNA–Protein interactions for RNA: ENST00000534404.1

LRP4-205, Transcript of LDL receptor related protein 4, humanhuman

TSL 5

Gene LRP4, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-205ENST00000534404 NUDCQ9Y266 331 aa44.33■■■■■ 4.69
LRP4-205ENST00000534404 C4BP0C0L5 1744 aa44.31■■■■■ 4.68
LRP4-205ENST00000534404 COL23A1Q86Y22 540 aaPredicted RBP44.31■■■■■ 4.68
LRP4-205ENST00000534404 FLAD1Q8NFF5 587 aa44.3■■■■■ 4.68
LRP4-205ENST00000534404 SGIP1Q9BQI5 828 aa44.3■■■■■ 4.68
LRP4-205ENST00000534404 POLD1P28340 1107 aa44.28■■■■■ 4.68
LRP4-205ENST00000534404 LINC00116Q8NCU8 138 aa44.28■■■■■ 4.68
LRP4-205ENST00000534404 ARXQ96QS3 562 aa44.28■■■■■ 4.68
LRP4-205ENST00000534404 ITPK1Q13572 414 aa44.26■■■■■ 4.68
LRP4-205ENST00000534404 LGR6Q9HBX8 967 aa44.26■■■■■ 4.68
LRP4-205ENST00000534404 SCN11AQ9UI33 1791 aa44.24■■■■■ 4.67
LRP4-205ENST00000534404 RNMTO43148 476 aaKnown RBP44.23■■■■■ 4.67
LRP4-205ENST00000534404 PHF14O94880 888 aa44.23■■■■■ 4.67
LRP4-205ENST00000534404 FHDC1Q9C0D6 1143 aaPredicted RBP44.22■■■■■ 4.67
LRP4-205ENST00000534404 U2AF1L5P0DN76 240 aaPredicted RBP44.21■■■■■ 4.67
LRP4-205ENST00000534404 U2AF1Q01081 240 aaKnown RBP eCLIP44.21■■■■■ 4.67
LRP4-205ENST00000534404 DDX10Q13206 875 aaKnown RBP44.21■■■■■ 4.67
LRP4-205ENST00000534404 SLC52A2Q9HAB3 445 aa44.21■■■■■ 4.67
LRP4-205ENST00000534404 DCAF8L1A6NGE4 600 aa44.2■■■■■ 4.67
LRP4-205ENST00000534404 PTCD1O75127 700 aaKnown RBP44.2■■■■■ 4.67
LRP4-205ENST00000534404 GAS2L2Q8NHY3 880 aa44.2■■■■■ 4.67
LRP4-205ENST00000534404 GNPATO15228 680 aa44.18■■■■■ 4.66
LRP4-205ENST00000534404 PRKAR2BP31323 418 aa44.18■■■■■ 4.66
LRP4-205ENST00000534404 SLC4A9Q96Q91 983 aa44.17■■■■■ 4.66
LRP4-205ENST00000534404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP44.16■■■■■ 4.66
LRP4-205ENST00000534404 MSL1Q68DK7 614 aa44.16■■■■■ 4.66
LRP4-205ENST00000534404 RSPH6AQ9H0K4 717 aa44.16■■■■■ 4.66
LRP4-205ENST00000534404 SSFA2P28290 1259 aa44.15■■■■■ 4.66
LRP4-205ENST00000534404 SMIM5Q71RC9 77 aa44.15■■■■■ 4.66
LRP4-205ENST00000534404 KLHL34Q8N239 644 aa44.15■■■■■ 4.66
LRP4-205ENST00000534404 SYT17Q9BSW7 474 aa44.15■■■■■ 4.66
LRP4-205ENST00000534404 GNAT3A8MTJ3 354 aa44.13■■■■■ 4.66
LRP4-205ENST00000534404 AMIGO3Q86WK7 504 aa44.13■■■■■ 4.66
LRP4-205ENST00000534404 ZEB1P37275 1124 aaPredicted RBP44.12■■■■■ 4.65
LRP4-205ENST00000534404 MAP3K5Q99683 1374 aa44.12■■■■■ 4.65
LRP4-205ENST00000534404 UBR3Q6ZT12 1888 aa44.12■■■■■ 4.65
LRP4-205ENST00000534404 ZNF831Q5JPB2 1677 aa44.11■■■■■ 4.65
LRP4-205ENST00000534404 PHACTR3Q96KR7 559 aa44.1■■■■■ 4.65
LRP4-205ENST00000534404 VIRMAQ69YN4 1812 aaKnown RBP44.09■■■■■ 4.65
LRP4-205ENST00000534404 COL24A1Q17RW2 1714 aa44.09■■■■■ 4.65
LRP4-205ENST00000534404 MRC1P22897 1456 aa44.08■■■■■ 4.65
LRP4-205ENST00000534404 FCHSD2O94868 740 aa44.08■■■■■ 4.65
LRP4-205ENST00000534404 RTCBQ9Y3I0 505 aaKnown RBP44.08■■■■■ 4.65
LRP4-205ENST00000534404 SLC39A6Q13433 755 aa44.06■■■■■ 4.64
LRP4-205ENST00000534404 TEFQ10587 303 aa44.05■■■■■ 4.64
LRP4-205ENST00000534404 RALBP1Q15311 655 aa44.05■■■■■ 4.64
LRP4-205ENST00000534404 RC3H1Q5TC82 1133 aaKnown RBP44.05■■■■■ 4.64
LRP4-205ENST00000534404 ADAMTS7Q9UKP4 1686 aa44.04■■■■■ 4.64
LRP4-205ENST00000534404 CNTNAP4Q9C0A0 1308 aa44.03■■■■■ 4.64
LRP4-205ENST00000534404 TRAPPC3LQ5T215 181 aa44.03■■■■■ 4.64
LRP4-205ENST00000534404 IL17REQ8NFR9 667 aa44.02■■■■■ 4.64
LRP4-205ENST00000534404 COL5A3P25940 1745 aaPredicted RBP44.02■■■■■ 4.64
LRP4-205ENST00000534404 NEFMP07197 916 aa43.99■■■■■ 4.63
LRP4-205ENST00000534404 TTC5Q8N0Z6 440 aa43.98■■■■■ 4.63
LRP4-205ENST00000534404 RPS6KA4O75676 772 aa43.97■■■■■ 4.63
LRP4-205ENST00000534404 CRKLP46109 303 aaKnown RBP43.97■■■■■ 4.63
LRP4-205ENST00000534404 RTF1Q92541 710 aaKnown RBP43.96■■■■■ 4.63
LRP4-205ENST00000534404 ADRA2BP18089 450 aa43.94■■■■■ 4.62
LRP4-205ENST00000534404 DNAJC10Q8IXB1 793 aa43.94■■■■■ 4.62
LRP4-205ENST00000534404 ARHGEF1Q92888 912 aaKnown RBP43.93■■■■■ 4.62
LRP4-205ENST00000534404 TJP1Q07157 1748 aa43.93■■■■■ 4.62
LRP4-205ENST00000534404 RFC4P35249 363 aa43.92■■■■■ 4.62
LRP4-205ENST00000534404 KCPQ6ZWJ8 1503 aa43.89■■■■■ 4.62
LRP4-205ENST00000534404 CICQ96RK0 1608 aaPredicted RBP43.88■■■■■ 4.62
LRP4-205ENST00000534404 PNNQ9H307 717 aaKnown RBP43.87■■■■■ 4.61
LRP4-205ENST00000534404 CEMIPQ8WUJ3 1361 aa43.87■■■■■ 4.61
LRP4-205ENST00000534404 ZNF790Q6PG37 636 aa43.86■■■■■ 4.61
LRP4-205ENST00000534404 VSIG10Q8N0Z9 540 aa43.86■■■■■ 4.61
LRP4-205ENST00000534404 MYBBP1AQ9BQG0 1328 aaKnown RBP43.86■■■■■ 4.61
LRP4-205ENST00000534404 CCDC87Q9NVE4 849 aa43.86■■■■■ 4.61
LRP4-205ENST00000534404 MYH14Q7Z406 1995 aaKnown RBP43.85■■■■■ 4.61
LRP4-205ENST00000534404 MCM10Q7L590 875 aa43.85■■■■■ 4.61
LRP4-205ENST00000534404 NLGN2Q8NFZ4 835 aa43.85■■■■■ 4.61
LRP4-205ENST00000534404 BTBD11A6QL63 1104 aa43.84■■■■■ 4.61
LRP4-205ENST00000534404 INTS5Q6P9B9 1019 aaKnown RBP43.84■■■■■ 4.61
LRP4-205ENST00000534404 NLGN1Q8N2Q7 840 aa43.83■■■■■ 4.61
LRP4-205ENST00000534404 CYP19A1P11511 503 aaPredicted RBP43.82■■■■■ 4.61
LRP4-205ENST00000534404 GPR162Q16538 588 aa43.82■■■■■ 4.61
LRP4-205ENST00000534404 PELP1Q8IZL8 1130 aaKnown RBP43.82■■■■■ 4.61
LRP4-205ENST00000534404 HTATSF1O43719 755 aaKnown RBP43.81■■■■■ 4.6
LRP4-205ENST00000534404 SIPA1L3O60292 1781 aaPredicted RBP43.81■■■■■ 4.6
LRP4-205ENST00000534404 UBR2Q8IWV8 1755 aa43.8■■■■■ 4.6
LRP4-205ENST00000534404 ZNF496Q96IT1 587 aaPredicted RBP43.8■■■■■ 4.6
LRP4-205ENST00000534404 CD2APQ9Y5K6 639 aa43.8■■■■■ 4.6
LRP4-205ENST00000534404 MAPK8IP3Q9UPT6 1336 aa43.79■■■■■ 4.6
LRP4-205ENST00000534404 MMP10P09238 476 aa43.79■■■■■ 4.6
LRP4-205ENST00000534404 DCTN1Q14203 1278 aa43.79■■■■■ 4.6
LRP4-205ENST00000534404 PLEKHF1Q96S99 279 aa43.78■■■■■ 4.6
LRP4-205ENST00000534404 GYS1P13807 737 aa43.77■■■■■ 4.6
LRP4-205ENST00000534404 FMNL2Q96PY5 1086 aa43.77■■■■■ 4.6
LRP4-205ENST00000534404 STARD3NLO95772 234 aa43.76■■■■■ 4.6
LRP4-205ENST00000534404 YY1P25490 414 aa43.75■■■■■ 4.59
LRP4-205ENST00000534404 HEG1Q9ULI3 1381 aa43.75■■■■■ 4.59
LRP4-205ENST00000534404 C4AP0C0L4 1744 aa43.74■■■■■ 4.59
LRP4-205ENST00000534404 TEX13AQ9BXU3 409 aaPredicted RBP43.74■■■■■ 4.59
LRP4-205ENST00000534404 SRP68Q9UHB9 627 aaKnown RBP43.73■■■■■ 4.59
LRP4-205ENST00000534404 ZBTB1Q9Y2K1 713 aa43.73■■■■■ 4.59
LRP4-205ENST00000534404 SOS1Q07889 1333 aaPredicted RBP43.72■■■■■ 4.59
LRP4-205ENST00000534404 KCNQ3O43525 872 aa43.71■■■■■ 4.59
LRP4-205ENST00000534404 ZPR1O75312 459 aa43.71■■■■■ 4.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms