RNA–Protein interactions for RNA: ENST00000533968.1

SPI1-204, Transcript of Spi-1 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene SPI1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPI1-204ENST00000533968 ATG3Q9NT62 314 aa27.09■■□□□ 1.93
SPI1-204ENST00000533968 COL24A1Q17RW2 1714 aa27.09■■□□□ 1.93
SPI1-204ENST00000533968 KDM6AO15550 1401 aaPredicted RBP27.08■■□□□ 1.93
SPI1-204ENST00000533968 RBM42Q9BTD8 480 aaKnown RBP27.06■■□□□ 1.92
SPI1-204ENST00000533968 MAP3K5Q99683 1374 aa27.06■■□□□ 1.92
SPI1-204ENST00000533968 UBR3Q6ZT12 1888 aa27.05■■□□□ 1.92
SPI1-204ENST00000533968 PHF14O94880 888 aa27.05■■□□□ 1.92
SPI1-204ENST00000533968 AKAP4Q5JQC9 854 aa27.05■■□□□ 1.92
SPI1-204ENST00000533968 LINC00116Q8NCU8 138 aa27.05■■□□□ 1.92
SPI1-204ENST00000533968 MSL1Q68DK7 614 aa27.04■■□□□ 1.92
SPI1-204ENST00000533968 U2SURPO15042 1029 aaKnown RBP27.03■■□□□ 1.92
SPI1-204ENST00000533968 CFAP53Q96M91 514 aa27.03■■□□□ 1.92
SPI1-204ENST00000533968 SCN11AQ9UI33 1791 aa27.03■■□□□ 1.92
SPI1-204ENST00000533968 SSFA2P28290 1259 aa27.02■■□□□ 1.92
SPI1-204ENST00000533968 ITPK1Q13572 414 aa27.02■■□□□ 1.92
SPI1-204ENST00000533968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.01■■□□□ 1.91
SPI1-204ENST00000533968 GNPATO15228 680 aa27.01■■□□□ 1.91
SPI1-204ENST00000533968 YY1P25490 414 aa27■■□□□ 1.91
SPI1-204ENST00000533968 NFATC2IPQ8NCF5 419 aa27■■□□□ 1.91
SPI1-204ENST00000533968 ZNF831Q5JPB2 1677 aa27■■□□□ 1.91
SPI1-204ENST00000533968 COL3A1P02461 1466 aaPredicted RBP27■■□□□ 1.91
SPI1-204ENST00000533968 VIRMAQ69YN4 1812 aaKnown RBP26.97■■□□□ 1.91
SPI1-204ENST00000533968 PTCD1O75127 700 aaKnown RBP26.96■■□□□ 1.91
SPI1-204ENST00000533968 RTCBQ9Y3I0 505 aaKnown RBP26.96■■□□□ 1.91
SPI1-204ENST00000533968 MTHFSDQ2M296 383 aaKnown RBP26.95■■□□□ 1.9
SPI1-204ENST00000533968 AMIGO3Q86WK7 504 aa26.95■■□□□ 1.9
SPI1-204ENST00000533968 COL5A3P25940 1745 aaPredicted RBP26.94■■□□□ 1.9
SPI1-204ENST00000533968 GPR162Q16538 588 aa26.94■■□□□ 1.9
SPI1-204ENST00000533968 SMIM5Q71RC9 77 aa26.94■■□□□ 1.9
SPI1-204ENST00000533968 SLC52A2Q9HAB3 445 aa26.94■■□□□ 1.9
SPI1-204ENST00000533968 NUDCQ9Y266 331 aa26.94■■□□□ 1.9
SPI1-204ENST00000533968 RNMTO43148 476 aaKnown RBP26.93■■□□□ 1.9
SPI1-204ENST00000533968 PELP1Q8IZL8 1130 aaKnown RBP26.93■■□□□ 1.9
SPI1-204ENST00000533968 SLC4A9Q96Q91 983 aa26.93■■□□□ 1.9
SPI1-204ENST00000533968 GAS2L2Q8NHY3 880 aa26.92■■□□□ 1.9
SPI1-204ENST00000533968 LGR6Q9HBX8 967 aa26.92■■□□□ 1.9
SPI1-204ENST00000533968 CNTNAP4Q9C0A0 1308 aa26.91■■□□□ 1.9
SPI1-204ENST00000533968 PPP2R1AP30153 589 aa26.91■■□□□ 1.9
SPI1-204ENST00000533968 TRAPPC3LQ5T215 181 aa26.91■■□□□ 1.9
SPI1-204ENST00000533968 RC3H1Q5TC82 1133 aaKnown RBP26.91■■□□□ 1.9
SPI1-204ENST00000533968 MRC1P22897 1456 aa26.9■■□□□ 1.9
SPI1-204ENST00000533968 NLGN2Q8NFZ4 835 aa26.89■■□□□ 1.9
SPI1-204ENST00000533968 ADRA2BP18089 450 aa26.88■■□□□ 1.89
SPI1-204ENST00000533968 ADAMTS7Q9UKP4 1686 aa26.86■■□□□ 1.89
SPI1-204ENST00000533968 RPS6KA4O75676 772 aa26.86■■□□□ 1.89
SPI1-204ENST00000533968 RFC4P35249 363 aa26.86■■□□□ 1.89
SPI1-204ENST00000533968 CD2APQ9Y5K6 639 aa26.86■■□□□ 1.89
SPI1-204ENST00000533968 TJP1Q07157 1748 aa26.85■■□□□ 1.89
SPI1-204ENST00000533968 CHD4Q14839 1912 aa26.85■■□□□ 1.89
SPI1-204ENST00000533968 GNAT3A8MTJ3 354 aa26.85■■□□□ 1.89
SPI1-204ENST00000533968 CICQ96RK0 1608 aaPredicted RBP26.85■■□□□ 1.89
SPI1-204ENST00000533968 U2AF1L5P0DN76 240 aaPredicted RBP26.84■■□□□ 1.89
SPI1-204ENST00000533968 PRKAR2BP31323 418 aa26.84■■□□□ 1.89
SPI1-204ENST00000533968 CRKLP46109 303 aaKnown RBP26.84■■□□□ 1.89
SPI1-204ENST00000533968 U2AF1Q01081 240 aaKnown RBP eCLIP26.84■■□□□ 1.89
SPI1-204ENST00000533968 TEFQ10587 303 aa26.84■■□□□ 1.89
SPI1-204ENST00000533968 SLC39A6Q13433 755 aa26.83■■□□□ 1.89
SPI1-204ENST00000533968 TTC5Q8N0Z6 440 aa26.83■■□□□ 1.89
SPI1-204ENST00000533968 ARHGEF1Q92888 912 aaKnown RBP26.83■■□□□ 1.89
SPI1-204ENST00000533968 MYH14Q7Z406 1995 aaKnown RBP26.82■■□□□ 1.88
SPI1-204ENST00000533968 NLGN1Q8N2Q7 840 aa26.82■■□□□ 1.88
SPI1-204ENST00000533968 RSPH6AQ9H0K4 717 aa26.82■■□□□ 1.88
SPI1-204ENST00000533968 MMP10P09238 476 aa26.8■■□□□ 1.88
SPI1-204ENST00000533968 UTRNP46939 3433 aa26.8■■□□□ 1.88
SPI1-204ENST00000533968 C4AP0C0L4 1744 aa26.79■■□□□ 1.88
SPI1-204ENST00000533968 DNAJC10Q8IXB1 793 aa26.79■■□□□ 1.88
SPI1-204ENST00000533968 KCPQ6ZWJ8 1503 aa26.78■■□□□ 1.88
SPI1-204ENST00000533968 GRIN3BO60391 1043 aa26.77■■□□□ 1.88
SPI1-204ENST00000533968 FCHSD2O94868 740 aa26.77■■□□□ 1.88
SPI1-204ENST00000533968 NEFMP07197 916 aa26.77■■□□□ 1.88
SPI1-204ENST00000533968 CCDC87Q9NVE4 849 aa26.77■■□□□ 1.88
SPI1-204ENST00000533968 VSIG10Q8N0Z9 540 aa26.76■■□□□ 1.87
SPI1-204ENST00000533968 PHACTR3Q96KR7 559 aa26.76■■□□□ 1.87
SPI1-204ENST00000533968 UBR2Q8IWV8 1755 aa26.76■■□□□ 1.87
SPI1-204ENST00000533968 GYS1P13807 737 aa26.75■■□□□ 1.87
SPI1-204ENST00000533968 IL17REQ8NFR9 667 aa26.75■■□□□ 1.87
SPI1-204ENST00000533968 RTF1Q92541 710 aaKnown RBP26.75■■□□□ 1.87
SPI1-204ENST00000533968 PARP3Q9Y6F1 533 aa26.74■■□□□ 1.87
SPI1-204ENST00000533968 INTS5Q6P9B9 1019 aaKnown RBP26.73■■□□□ 1.87
SPI1-204ENST00000533968 SIPA1L3O60292 1781 aaPredicted RBP26.73■■□□□ 1.87
SPI1-204ENST00000533968 GOLGB1Q14789 3259 aaKnown RBP26.72■■□□□ 1.87
SPI1-204ENST00000533968 USP42Q9H9J4 1324 aaKnown RBP26.72■■□□□ 1.87
SPI1-204ENST00000533968 ZPR1O75312 459 aa26.72■■□□□ 1.87
SPI1-204ENST00000533968 CYP19A1P11511 503 aaPredicted RBP26.72■■□□□ 1.87
SPI1-204ENST00000533968 YBX3P16989 372 aaKnown RBP eCLIP26.72■■□□□ 1.872e-8■□□□□ 8.6
SPI1-204ENST00000533968 ZNF790Q6PG37 636 aa26.71■■□□□ 1.87
SPI1-204ENST00000533968 STARD3NLO95772 234 aa26.7■■□□□ 1.86
SPI1-204ENST00000533968 SRP68Q9UHB9 627 aaKnown RBP26.7■■□□□ 1.86
SPI1-204ENST00000533968 CEMIPQ8WUJ3 1361 aa26.7■■□□□ 1.86
SPI1-204ENST00000533968 SOS1Q07889 1333 aaPredicted RBP26.69■■□□□ 1.86
SPI1-204ENST00000533968 BTBD11A6QL63 1104 aa26.69■■□□□ 1.86
SPI1-204ENST00000533968 TEX13AQ9BXU3 409 aaPredicted RBP26.68■■□□□ 1.86
SPI1-204ENST00000533968 ZBTB1Q9Y2K1 713 aa26.68■■□□□ 1.86
SPI1-204ENST00000533968 COL15A1P39059 1388 aa26.68■■□□□ 1.86
SPI1-204ENST00000533968 HEG1Q9ULI3 1381 aa26.68■■□□□ 1.86
SPI1-204ENST00000533968 DDX10Q13206 875 aaKnown RBP26.67■■□□□ 1.86
SPI1-204ENST00000533968 RALBP1Q15311 655 aa26.67■■□□□ 1.86
SPI1-204ENST00000533968 ZNF496Q96IT1 587 aaPredicted RBP26.67■■□□□ 1.86
SPI1-204ENST00000533968 FMNL2Q96PY5 1086 aa26.67■■□□□ 1.86
SPI1-204ENST00000533968 KIF13BQ9NQT8 1826 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms