RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 SIPA1L3O60292 1781 aaPredicted RBP20.41■□□□□ 0.86
CTTN-215ENST00000533931 ITGB4P16144 1822 aa20.41■□□□□ 0.86
CTTN-215ENST00000533931 SF3B2Q13435 895 aaKnown RBP20.41■□□□□ 0.86
CTTN-215ENST00000533931 WWC1Q8IX03 1113 aa20.41■□□□□ 0.86
CTTN-215ENST00000533931 IL16Q14005 1332 aa20.41■□□□□ 0.86
CTTN-215ENST00000533931 PLSCR1O15162 318 aa20.4■□□□□ 0.86
CTTN-215ENST00000533931 PAPPAQ13219 1627 aa20.4■□□□□ 0.86
CTTN-215ENST00000533931 DCTN1Q14203 1278 aa20.4■□□□□ 0.86
CTTN-215ENST00000533931 TAF7Q15545 349 aaPredicted RBP20.4■□□□□ 0.86
CTTN-215ENST00000533931 WDR63Q8IWG1 891 aa20.4■□□□□ 0.86
CTTN-215ENST00000533931 BTAF1O14981 1849 aa20.39■□□□□ 0.86
CTTN-215ENST00000533931 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.86
CTTN-215ENST00000533931 HMGB2P26583 209 aaKnown RBP20.39■□□□□ 0.85
CTTN-215ENST00000533931 UPF1Q92900 1129 aaKnown RBP eCLIP20.39■□□□□ 0.85
CTTN-215ENST00000533931 ZNF521Q96K83 1311 aa20.38■□□□□ 0.85
CTTN-215ENST00000533931 BAG6P46379 1132 aa20.37■□□□□ 0.85
CTTN-215ENST00000533931 PTF1AQ7RTS3 328 aa20.37■□□□□ 0.85
CTTN-215ENST00000533931 IFT57Q9NWB7 429 aa20.37■□□□□ 0.85
CTTN-215ENST00000533931 PALLDQ8WX93 1383 aa20.36■□□□□ 0.85
CTTN-215ENST00000533931 BTBD11A6QL63 1104 aa20.36■□□□□ 0.85
CTTN-215ENST00000533931 APBA3O96018 575 aa20.36■□□□□ 0.85
CTTN-215ENST00000533931 CFAP44Q96MT7 982 aa20.36■□□□□ 0.85
CTTN-215ENST00000533931 THUMPD2Q9BTF0 503 aaKnown RBP20.36■□□□□ 0.85
CTTN-215ENST00000533931 ATG3Q9NT62 314 aa20.36■□□□□ 0.85
CTTN-215ENST00000533931 ZNF831Q5JPB2 1677 aa20.35■□□□□ 0.85
CTTN-215ENST00000533931 CHL1O00533 1208 aa20.35■□□□□ 0.85
CTTN-215ENST00000533931 ZNF853P0CG23 659 aa20.35■□□□□ 0.85
CTTN-215ENST00000533931 GNAI1P63096 354 aa20.35■□□□□ 0.85
CTTN-215ENST00000533931 ZNF790Q6PG37 636 aa20.35■□□□□ 0.85
CTTN-215ENST00000533931 ASAP1Q9ULH1 1129 aa20.34■□□□□ 0.85
CTTN-215ENST00000533931 CICQ96RK0 1608 aaPredicted RBP20.34■□□□□ 0.85
CTTN-215ENST00000533931 SLC27A3Q5K4L6 730 aa20.33■□□□□ 0.85
CTTN-215ENST00000533931 TTC5Q8N0Z6 440 aa20.33■□□□□ 0.85
CTTN-215ENST00000533931 KDM3BQ7LBC6 1761 aa20.33■□□□□ 0.84
CTTN-215ENST00000533931 UBR2Q8IWV8 1755 aa20.33■□□□□ 0.84
CTTN-215ENST00000533931 LY75O60449 1722 aa20.33■□□□□ 0.84
CTTN-215ENST00000533931 KCPQ6ZWJ8 1503 aa20.32■□□□□ 0.84
CTTN-215ENST00000533931 HNRNPUQ00839 825 aaKnown RBP eCLIP20.32■□□□□ 0.84
CTTN-215ENST00000533931 VSIG10Q8N0Z9 540 aa20.32■□□□□ 0.84
CTTN-215ENST00000533931 CAMKK2Q96RR4 588 aa20.31■□□□□ 0.84
CTTN-215ENST00000533931 TSPYL4Q9UJ04 414 aa20.31■□□□□ 0.84
CTTN-215ENST00000533931 ZBED9Q6R2W3 1325 aa20.3■□□□□ 0.84
CTTN-215ENST00000533931 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
CTTN-215ENST00000533931 LOC102724428A0A0B4J2F2 783 aa20.29■□□□□ 0.84
CTTN-215ENST00000533931 SIK1P57059 783 aa20.29■□□□□ 0.84
CTTN-215ENST00000533931 MYH16Q9H6N6 1097 aa20.29■□□□□ 0.84
CTTN-215ENST00000533931 HEG1Q9ULI3 1381 aa20.29■□□□□ 0.84
CTTN-215ENST00000533931 GOLGA2Q08379 1002 aa20.28■□□□□ 0.84
CTTN-215ENST00000533931 SLC39A6Q13433 755 aa20.28■□□□□ 0.84
CTTN-215ENST00000533931 TXNRD1Q16881 649 aa20.28■□□□□ 0.84
CTTN-215ENST00000533931 SALL2Q9Y467 1007 aaPredicted RBP20.28■□□□□ 0.84
CTTN-215ENST00000533931 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
CTTN-215ENST00000533931 RREB1Q92766 1687 aa20.27■□□□□ 0.84
CTTN-215ENST00000533931 E9PSI1 815 aa20.27■□□□□ 0.84
CTTN-215ENST00000533931 ZNF496Q96IT1 587 aaPredicted RBP20.27■□□□□ 0.84
CTTN-215ENST00000533931 TEX13AQ9BXU3 409 aaPredicted RBP20.27■□□□□ 0.84
CTTN-215ENST00000533931 EIF4A1P60842 406 aaKnown RBP20.26■□□□□ 0.83
CTTN-215ENST00000533931 MBIPQ9NS73 344 aa20.26■□□□□ 0.83
CTTN-215ENST00000533931 CCNL1Q9UK58 526 aaPredicted RBP20.26■□□□□ 0.83
CTTN-215ENST00000533931 KAT6BQ8WYB5 2073 aa20.25■□□□□ 0.83
CTTN-215ENST00000533931 PTCD1O75127 700 aaKnown RBP20.25■□□□□ 0.83
CTTN-215ENST00000533931 HOXB7P09629 217 aa20.25■□□□□ 0.83
CTTN-215ENST00000533931 EN1Q05925 392 aaPredicted RBP20.25■□□□□ 0.83
CTTN-215ENST00000533931 PROM2Q8N271 834 aa20.25■□□□□ 0.83
CTTN-215ENST00000533931 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
CTTN-215ENST00000533931 C5P01031 1676 aa20.24■□□□□ 0.83
CTTN-215ENST00000533931 SENP3-EIF4A1A0A087X0R7 540 aa20.24■□□□□ 0.83
CTTN-215ENST00000533931 SNRPA1P09661 255 aaKnown RBP20.24■□□□□ 0.83
CTTN-215ENST00000533931 DEFB132Q7Z7B7 95 aa20.24■□□□□ 0.83
CTTN-215ENST00000533931 LAS1LQ9Y4W2 734 aaKnown RBP20.24■□□□□ 0.83
CTTN-215ENST00000533931 KCNQ3O43525 872 aa20.23■□□□□ 0.83
CTTN-215ENST00000533931 ATP6V1AP38606 617 aa20.23■□□□□ 0.83
CTTN-215ENST00000533931 EZH2Q15910 746 aaKnown RBP20.23■□□□□ 0.83
CTTN-215ENST00000533931 SLC4A9Q96Q91 983 aa20.23■□□□□ 0.83
CTTN-215ENST00000533931 RBM42Q9BTD8 480 aaKnown RBP20.23■□□□□ 0.83
CTTN-215ENST00000533931 CHMP4AQ9BY43 222 aa20.23■□□□□ 0.83
CTTN-215ENST00000533931 FANCIQ9NVI1 1328 aa20.23■□□□□ 0.83
CTTN-215ENST00000533931 SLFN5Q08AF3 891 aa20.22■□□□□ 0.83
CTTN-215ENST00000533931 TRMT2AQ8IZ69 625 aaKnown RBP20.22■□□□□ 0.83
CTTN-215ENST00000533931 TJP1Q07157 1748 aa20.22■□□□□ 0.83
CTTN-215ENST00000533931 GIGYF1O75420 1035 aaPredicted RBP20.21■□□□□ 0.83
CTTN-215ENST00000533931 LRRC4BQ9NT99 713 aa20.21■□□□□ 0.83
CTTN-215ENST00000533931 CNTNAP4Q9C0A0 1308 aa20.21■□□□□ 0.83
CTTN-215ENST00000533931 STARD3NLO95772 234 aa20.2■□□□□ 0.82
CTTN-215ENST00000533931 ITPK1Q13572 414 aa20.2■□□□□ 0.82
CTTN-215ENST00000533931 RC3H1Q5TC82 1133 aaKnown RBP20.2■□□□□ 0.82
CTTN-215ENST00000533931 SPINK5Q9NQ38 1064 aaPredicted RBP20.2■□□□□ 0.82
CTTN-215ENST00000533931 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
CTTN-215ENST00000533931 NUP188Q5SRE5 1749 aa20.19■□□□□ 0.82
CTTN-215ENST00000533931 LAMB4A4D0S4 1761 aa20.18■□□□□ 0.82
CTTN-215ENST00000533931 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
CTTN-215ENST00000533931 ERBB4Q15303 1308 aa20.18■□□□□ 0.82
CTTN-215ENST00000533931 CYP19A1P11511 503 aaPredicted RBP20.17■□□□□ 0.82
CTTN-215ENST00000533931 DNAJC10Q8IXB1 793 aa20.17■□□□□ 0.82
CTTN-215ENST00000533931 C4BP0C0L5 1744 aa20.16■□□□□ 0.82
CTTN-215ENST00000533931 TAF1LQ8IZX4 1826 aa20.16■□□□□ 0.82
CTTN-215ENST00000533931 CT47B1P0C2W7 299 aaPredicted RBP20.16■□□□□ 0.82
CTTN-215ENST00000533931 LINC00116Q8NCU8 138 aa20.16■□□□□ 0.82
CTTN-215ENST00000533931 NBPF14Q5TI25 921 aa20.15■□□□□ 0.82
CTTN-215ENST00000533931 DUSP27Q5VZP5 1158 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms