RNA–Protein interactions for RNA: ENST00000533888.1

GSDMD-214, Transcript of gasdermin D, humanhuman

TSL 4

Gene GSDMD, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-214ENST00000533888 ATP6V1AP38606 617 aa21.54■■□□□ 1.04
GSDMD-214ENST00000533888 SSFA2P28290 1259 aa21.53■■□□□ 1.04
GSDMD-214ENST00000533888 HMGB2P26583 209 aaKnown RBP21.52■■□□□ 1.04
GSDMD-214ENST00000533888 AMER1Q5JTC6 1135 aaPredicted RBP21.52■■□□□ 1.04
GSDMD-214ENST00000533888 ZNF530Q6P9A1 599 aaPredicted RBP21.52■■□□□ 1.04
GSDMD-214ENST00000533888 KNSTRNQ9Y448 316 aa21.52■■□□□ 1.04
GSDMD-214ENST00000533888 KIF7Q2M1P5 1343 aa21.52■■□□□ 1.03
GSDMD-214ENST00000533888 ERVV-2B6SEH9 535 aa21.51■■□□□ 1.03
GSDMD-214ENST00000533888 GNPATO15228 680 aa21.51■■□□□ 1.03
GSDMD-214ENST00000533888 PLEKHO1Q53GL0 409 aaPredicted RBP21.51■■□□□ 1.03
GSDMD-214ENST00000533888 CD2APQ9Y5K6 639 aa21.51■■□□□ 1.03
GSDMD-214ENST00000533888 COL5A3P25940 1745 aaPredicted RBP21.5■■□□□ 1.03
GSDMD-214ENST00000533888 DCAF5Q96JK2 942 aa21.5■■□□□ 1.03
GSDMD-214ENST00000533888 ZNF831Q5JPB2 1677 aa21.5■■□□□ 1.03
GSDMD-214ENST00000533888 IL13P35225 146 aa21.49■■□□□ 1.03
GSDMD-214ENST00000533888 SULT6B1Q6IMI4 303 aa21.48■■□□□ 1.03
GSDMD-214ENST00000533888 RBM42Q9BTD8 480 aaKnown RBP21.48■■□□□ 1.03
GSDMD-214ENST00000533888 MYH14Q7Z406 1995 aaKnown RBP21.47■■□□□ 1.03
GSDMD-214ENST00000533888 HSP90AB1P08238 724 aaKnown RBP21.47■■□□□ 1.03
GSDMD-214ENST00000533888 AMOTQ4VCS5 1084 aa21.47■■□□□ 1.03
GSDMD-214ENST00000533888 GRIN3BO60391 1043 aa21.46■■□□□ 1.03
GSDMD-214ENST00000533888 CABP4P57796 275 aa21.45■■□□□ 1.02
GSDMD-214ENST00000533888 WWC3Q9ULE0 1092 aa21.45■■□□□ 1.02
GSDMD-214ENST00000533888 SCN11AQ9UI33 1791 aa21.44■■□□□ 1.02
GSDMD-214ENST00000533888 PER1O15534 1290 aaPredicted RBP21.44■■□□□ 1.02
GSDMD-214ENST00000533888 MTHFSP49914 203 aa21.44■■□□□ 1.02
GSDMD-214ENST00000533888 TJP1Q07157 1748 aa21.42■■□□□ 1.02
GSDMD-214ENST00000533888 C1orf141Q5JVX7 400 aa21.42■■□□□ 1.02
GSDMD-214ENST00000533888 NFATC2IPQ8NCF5 419 aa21.42■■□□□ 1.02
GSDMD-214ENST00000533888 KIAA1551Q9HCM1 1747 aa21.42■■□□□ 1.02
GSDMD-214ENST00000533888 C4AP0C0L4 1744 aa21.41■■□□□ 1.02
GSDMD-214ENST00000533888 CNTNAP4Q9C0A0 1308 aa21.41■■□□□ 1.02
GSDMD-214ENST00000533888 PTCD1O75127 700 aaKnown RBP21.41■■□□□ 1.02
GSDMD-214ENST00000533888 MMP10P09238 476 aa21.41■■□□□ 1.02
GSDMD-214ENST00000533888 C1QTNF8P60827 252 aa21.41■■□□□ 1.02
GSDMD-214ENST00000533888 RC3H1Q5TC82 1133 aaKnown RBP21.41■■□□□ 1.02
GSDMD-214ENST00000533888 ARHGEF1Q92888 912 aaKnown RBP21.41■■□□□ 1.02
GSDMD-214ENST00000533888 RTCBQ9Y3I0 505 aaKnown RBP21.41■■□□□ 1.02
GSDMD-214ENST00000533888 KIF13BQ9NQT8 1826 aa21.41■■□□□ 1.02
GSDMD-214ENST00000533888 CICQ96RK0 1608 aaPredicted RBP21.4■■□□□ 1.02
GSDMD-214ENST00000533888 TRAPPC3LQ5T215 181 aa21.4■■□□□ 1.02
GSDMD-214ENST00000533888 VIRMAQ69YN4 1812 aaKnown RBP21.39■■□□□ 1.02
GSDMD-214ENST00000533888 CC2D1BQ5T0F9 858 aaKnown RBP21.39■■□□□ 1.01
GSDMD-214ENST00000533888 RPS6KA4O75676 772 aa21.38■■□□□ 1.01
GSDMD-214ENST00000533888 HMOX1P09601 288 aa21.38■■□□□ 1.01
GSDMD-214ENST00000533888 LGR6Q9HBX8 967 aa21.38■■□□□ 1.01
GSDMD-214ENST00000533888 N4BP2Q86UW6 1770 aaPredicted RBP21.38■■□□□ 1.01
GSDMD-214ENST00000533888 ATP10DQ9P241 1426 aa21.38■■□□□ 1.01
GSDMD-214ENST00000533888 GYS1P13807 737 aa21.37■■□□□ 1.01
GSDMD-214ENST00000533888 PXDNLA1KZ92 1463 aa21.37■■□□□ 1.01
GSDMD-214ENST00000533888 CRKLP46109 303 aaKnown RBP21.36■■□□□ 1.01
GSDMD-214ENST00000533888 AKAP4Q5JQC9 854 aa21.36■■□□□ 1.01
GSDMD-214ENST00000533888 ADCY9O60503 1353 aa21.36■■□□□ 1.01
GSDMD-214ENST00000533888 ADAMTS7Q9UKP4 1686 aa21.35■■□□□ 1.01
GSDMD-214ENST00000533888 MRC1P22897 1456 aa21.35■■□□□ 1.01
GSDMD-214ENST00000533888 GIGYF1O75420 1035 aaPredicted RBP21.35■■□□□ 1.01
GSDMD-214ENST00000533888 ADRA2BP18089 450 aa21.35■■□□□ 1.01
GSDMD-214ENST00000533888 C10orf71Q711Q0 1435 aa21.35■■□□□ 1.01
GSDMD-214ENST00000533888 COL3A1P02461 1466 aaPredicted RBP21.34■■□□□ 1.01
GSDMD-214ENST00000533888 NLGN1Q8N2Q7 840 aa21.34■■□□□ 1.01
GSDMD-214ENST00000533888 SLC52A2Q9HAB3 445 aa21.34■■□□□ 1.01
GSDMD-214ENST00000533888 SRP68Q9UHB9 627 aaKnown RBP21.34■■□□□ 1.01
GSDMD-214ENST00000533888 CEP350Q5VT06 3117 aa21.33■■□□□ 1.01
GSDMD-214ENST00000533888 SENP3-EIF4A1A0A087X0R7 540 aa21.33■■□□□ 1.01
GSDMD-214ENST00000533888 RNMTO43148 476 aaKnown RBP21.33■■□□□ 1.01
GSDMD-214ENST00000533888 RFC4P35249 363 aa21.33■■□□□ 1.01
GSDMD-214ENST00000533888 MTHFSDQ2M296 383 aaKnown RBP21.33■■□□□ 1.01
GSDMD-214ENST00000533888 CNGB1Q14028 1251 aaPredicted RBP21.32■■□□□ 1
GSDMD-214ENST00000533888 KCPQ6ZWJ8 1503 aa21.31■■□□□ 1
GSDMD-214ENST00000533888 DIAPH1O60610 1272 aaKnown RBP21.31■■□□□ 1
GSDMD-214ENST00000533888 SLC39A6Q13433 755 aa21.31■■□□□ 1
GSDMD-214ENST00000533888 INTS5Q6P9B9 1019 aaKnown RBP21.31■■□□□ 1
GSDMD-214ENST00000533888 A0A0G2JLW4 131 aa21.3■■□□□ 1
GSDMD-214ENST00000533888 DNAJC10Q8IXB1 793 aa21.3■■□□□ 1
GSDMD-214ENST00000533888 BRCA1P38398 1863 aaKnown RBP21.3■■□□□ 1
GSDMD-214ENST00000533888 NPC1L1Q9UHC9 1359 aa21.29■■□□□ 1
GSDMD-214ENST00000533888 FKBP8Q14318 412 aa21.29■■□□□ 1
GSDMD-214ENST00000533888 USP42Q9H9J4 1324 aaKnown RBP21.29■■□□□ 1
GSDMD-214ENST00000533888 TGFB2P61812 414 aa21.28■■□□□ 1
GSDMD-214ENST00000533888 DPEP1P16444 411 aa21.27■■□□□ 1
GSDMD-214ENST00000533888 DDR1Q08345 913 aa21.27■■□□□ 1
GSDMD-214ENST00000533888 CCDC87Q9NVE4 849 aa21.27■■□□□ 1
GSDMD-214ENST00000533888 PARP3Q9Y6F1 533 aa21.27■■□□□ 1
GSDMD-214ENST00000533888 UBR2Q8IWV8 1755 aa21.26■□□□□ 0.99
GSDMD-214ENST00000533888 ZNF526Q8TF50 670 aaPredicted RBP21.26■□□□□ 0.99
GSDMD-214ENST00000533888 CYP19A1P11511 503 aaPredicted RBP21.25■□□□□ 0.99
GSDMD-214ENST00000533888 KCNA3P22001 575 aa21.25■□□□□ 0.99
GSDMD-214ENST00000533888 BCS1LQ9Y276 419 aa21.25■□□□□ 0.99
GSDMD-214ENST00000533888 SOS1Q07889 1333 aaPredicted RBP21.25■□□□□ 0.99
GSDMD-214ENST00000533888 GPBP1L1Q9HC44 474 aaPredicted RBP21.24■□□□□ 0.99
GSDMD-214ENST00000533888 ZBTB1Q9Y2K1 713 aa21.23■□□□□ 0.99
GSDMD-214ENST00000533888 U2SURPO15042 1029 aaKnown RBP21.22■□□□□ 0.99
GSDMD-214ENST00000533888 USPL1Q5W0Q7 1092 aa21.22■□□□□ 0.99
GSDMD-214ENST00000533888 SIPA1L3O60292 1781 aaPredicted RBP21.21■□□□□ 0.99
GSDMD-214ENST00000533888 POLRMTO00411 1230 aaKnown RBP21.21■□□□□ 0.99
GSDMD-214ENST00000533888 TM4SF1P30408 202 aa21.21■□□□□ 0.99
GSDMD-214ENST00000533888 AFDNP55196 1824 aaKnown RBP21.2■□□□□ 0.98
GSDMD-214ENST00000533888 ARFGEF1Q9Y6D6 1849 aa21.2■□□□□ 0.98
GSDMD-214ENST00000533888 FCHSD2O94868 740 aa21.2■□□□□ 0.98
GSDMD-214ENST00000533888 IL17REQ8NFR9 667 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms