RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 C1QTNF8P60827 252 aa12.72□□□□□ -0.37
BEST3-207ENST00000533674 IP6K1Q92551 441 aa12.72□□□□□ -0.37
BEST3-207ENST00000533674 TONSLQ96HA7 1378 aa12.71□□□□□ -0.37
BEST3-207ENST00000533674 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
BEST3-207ENST00000533674 ANKRD36BQ8N2N9 1353 aa12.7□□□□□ -0.38
BEST3-207ENST00000533674 PNPLA7Q6ZV29 1317 aa12.7□□□□□ -0.38
BEST3-207ENST00000533674 POTEJP0CG39 1038 aa12.7□□□□□ -0.38
BEST3-207ENST00000533674 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
BEST3-207ENST00000533674 KCNQ4P56696 695 aa12.7□□□□□ -0.38
BEST3-207ENST00000533674 IRX5P78411 483 aaPredicted RBP12.7□□□□□ -0.38
BEST3-207ENST00000533674 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
BEST3-207ENST00000533674 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
BEST3-207ENST00000533674 ZCRB1Q8TBF4 217 aaKnown RBP12.69□□□□□ -0.38
BEST3-207ENST00000533674 OTUD5Q96G74 571 aa12.69□□□□□ -0.38
BEST3-207ENST00000533674 SMG6Q86US8 1419 aaKnown RBP12.69□□□□□ -0.38
BEST3-207ENST00000533674 TUBGCP6Q96RT7 1819 aa12.69□□□□□ -0.38
BEST3-207ENST00000533674 USP47Q96K76 1375 aa12.69□□□□□ -0.38
BEST3-207ENST00000533674 HOXC9P31274 260 aa12.68□□□□□ -0.38
BEST3-207ENST00000533674 MAP3K19Q56UN5 1328 aa12.67□□□□□ -0.38
BEST3-207ENST00000533674 PLCG2P16885 1265 aa12.67□□□□□ -0.38
BEST3-207ENST00000533674 GOLGA2Q08379 1002 aa12.67□□□□□ -0.38
BEST3-207ENST00000533674 LY75O60449 1722 aa12.67□□□□□ -0.38
BEST3-207ENST00000533674 GRIN3BO60391 1043 aa12.66□□□□□ -0.38
BEST3-207ENST00000533674 NLGN2Q8NFZ4 835 aa12.66□□□□□ -0.38
BEST3-207ENST00000533674 RAPGEF4Q8WZA2 1011 aa12.66□□□□□ -0.38
BEST3-207ENST00000533674 PUS7Q96PZ0 661 aaKnown RBP12.66□□□□□ -0.38
BEST3-207ENST00000533674 RGPD2P0DJD1 1756 aa12.66□□□□□ -0.38
BEST3-207ENST00000533674 UTRNP46939 3433 aa12.65□□□□□ -0.38
BEST3-207ENST00000533674 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
BEST3-207ENST00000533674 HMGB2P26583 209 aaKnown RBP12.65□□□□□ -0.38
BEST3-207ENST00000533674 MAMSTRQ6ZN01 415 aa12.65□□□□□ -0.38
BEST3-207ENST00000533674 MEGF6O75095 1541 aa12.65□□□□□ -0.38
BEST3-207ENST00000533674 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
BEST3-207ENST00000533674 COL24A1Q17RW2 1714 aa12.65□□□□□ -0.38
BEST3-207ENST00000533674 SHANK3Q9BYB0 1731 aa12.65□□□□□ -0.38
BEST3-207ENST00000533674 ECM2O94769 699 aaPredicted RBP12.64□□□□□ -0.39
BEST3-207ENST00000533674 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
BEST3-207ENST00000533674 MKRN3Q13064 507 aaKnown RBP12.64□□□□□ -0.39
BEST3-207ENST00000533674 MSL1Q68DK7 614 aa12.64□□□□□ -0.39
BEST3-207ENST00000533674 USHBP1Q8N6Y0 703 aa12.64□□□□□ -0.39
BEST3-207ENST00000533674 OCEL1Q9H607 264 aa12.64□□□□□ -0.39
BEST3-207ENST00000533674 CGNL1Q0VF96 1302 aa12.63□□□□□ -0.39
BEST3-207ENST00000533674 FBLN1P23142 703 aa12.63□□□□□ -0.39
BEST3-207ENST00000533674 RRS1Q15050 365 aaKnown RBP12.63□□□□□ -0.39
BEST3-207ENST00000533674 NSD2O96028 1365 aa12.63□□□□□ -0.39
BEST3-207ENST00000533674 C5P01031 1676 aa12.63□□□□□ -0.39
BEST3-207ENST00000533674 PCDH11XQ9BZA7 1347 aa12.62□□□□□ -0.39
BEST3-207ENST00000533674 PCDH11YQ9BZA8 1340 aa12.62□□□□□ -0.39
BEST3-207ENST00000533674 ST20-MTHFSA0A0A6YYL1 179 aa12.62□□□□□ -0.39
BEST3-207ENST00000533674 COL23A1Q86Y22 540 aaPredicted RBP12.62□□□□□ -0.39
BEST3-207ENST00000533674 YBX3P16989 372 aaKnown RBP eCLIP12.61□□□□□ -0.39
BEST3-207ENST00000533674 NBPF6Q5VWK0 638 aa12.61□□□□□ -0.39
BEST3-207ENST00000533674 FLAD1Q8NFF5 587 aa12.61□□□□□ -0.39
BEST3-207ENST00000533674 NBPF4Q96M43 638 aa12.61□□□□□ -0.39
BEST3-207ENST00000533674 GGNBP2Q9H3C7 697 aa12.61□□□□□ -0.39
BEST3-207ENST00000533674 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
BEST3-207ENST00000533674 MPRIPQ6WCQ1 1025 aa12.6□□□□□ -0.39
BEST3-207ENST00000533674 AK7Q96M32 723 aa12.6□□□□□ -0.39
BEST3-207ENST00000533674 SCUBE2Q9NQ36 999 aa12.6□□□□□ -0.39
BEST3-207ENST00000533674 TMF1P82094 1093 aa12.59□□□□□ -0.39
BEST3-207ENST00000533674 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
BEST3-207ENST00000533674 KIF20BQ96Q89 1820 aa12.59□□□□□ -0.39
BEST3-207ENST00000533674 FLT4P35916 1363 aa12.58□□□□□ -0.4
BEST3-207ENST00000533674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
BEST3-207ENST00000533674 PHF14O94880 888 aa12.58□□□□□ -0.4
BEST3-207ENST00000533674 SMARCC1Q92922 1105 aaPredicted RBP12.58□□□□□ -0.4
BEST3-207ENST00000533674 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
BEST3-207ENST00000533674 TESK2Q96S53 571 aa12.58□□□□□ -0.4
BEST3-207ENST00000533674 ATP10DQ9P241 1426 aa12.58□□□□□ -0.4
BEST3-207ENST00000533674 CD2APQ9Y5K6 639 aa12.58□□□□□ -0.4
BEST3-207ENST00000533674 NSD3Q9BZ95 1437 aa12.57□□□□□ -0.4
BEST3-207ENST00000533674 FYB1O15117 783 aa12.57□□□□□ -0.4
BEST3-207ENST00000533674 PDCD7Q8N8D1 485 aaKnown RBP12.57□□□□□ -0.4
BEST3-207ENST00000533674 ZNF526Q8TF50 670 aaPredicted RBP12.57□□□□□ -0.4
BEST3-207ENST00000533674 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
BEST3-207ENST00000533674 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
BEST3-207ENST00000533674 INSRP06213 1382 aa12.56□□□□□ -0.4
BEST3-207ENST00000533674 TAF1LQ8IZX4 1826 aa12.56□□□□□ -0.4
BEST3-207ENST00000533674 PPM1GO15355 546 aaPredicted RBP12.56□□□□□ -0.4
BEST3-207ENST00000533674 CDCA8Q53HL2 280 aa12.56□□□□□ -0.4
BEST3-207ENST00000533674 HSP90AB2PQ58FF8 381 aa12.56□□□□□ -0.4
BEST3-207ENST00000533674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.4
BEST3-207ENST00000533674 WWC3Q9ULE0 1092 aa12.55□□□□□ -0.4
BEST3-207ENST00000533674 ITGB4P16144 1822 aa12.54□□□□□ -0.4
BEST3-207ENST00000533674 RGL2O15211 777 aa12.54□□□□□ -0.4
BEST3-207ENST00000533674 SPG7Q9UQ90 795 aa12.54□□□□□ -0.4
BEST3-207ENST00000533674 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
BEST3-207ENST00000533674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
BEST3-207ENST00000533674 CYP27B1O15528 508 aa12.53□□□□□ -0.4
BEST3-207ENST00000533674 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
BEST3-207ENST00000533674 TOGARAM1Q9Y4F4 1720 aa12.53□□□□□ -0.4
BEST3-207ENST00000533674 PKD1L3Q7Z443 1732 aa12.52□□□□□ -0.41
BEST3-207ENST00000533674 IFFO2Q5TF58 517 aa12.52□□□□□ -0.41
BEST3-207ENST00000533674 TMOD3Q9NYL9 352 aa12.52□□□□□ -0.41
BEST3-207ENST00000533674 GNPATO15228 680 aa12.51□□□□□ -0.41
BEST3-207ENST00000533674 SSFA2P28290 1259 aa12.51□□□□□ -0.41
BEST3-207ENST00000533674 EFCAB3Q8N7B9 438 aa12.51□□□□□ -0.41
BEST3-207ENST00000533674 EMILIN1Q9Y6C2 1016 aa12.51□□□□□ -0.41
BEST3-207ENST00000533674 UBR3Q6ZT12 1888 aa12.51□□□□□ -0.41
BEST3-207ENST00000533674 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms