RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 PIGBQ92521 554 aa18.42■□□□□ 0.54
CMTM1-217ENST00000533666 TOGARAM1Q9Y4F4 1720 aa18.42■□□□□ 0.54
CMTM1-217ENST00000533666 MRC1P22897 1456 aa18.41■□□□□ 0.54
CMTM1-217ENST00000533666 DCTN1Q14203 1278 aa18.41■□□□□ 0.54
CMTM1-217ENST00000533666 TRIM35Q9UPQ4 493 aa18.41■□□□□ 0.54
CMTM1-217ENST00000533666 BTAF1O14981 1849 aa18.4■□□□□ 0.54
CMTM1-217ENST00000533666 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
CMTM1-217ENST00000533666 TTC5Q8N0Z6 440 aa18.4■□□□□ 0.54
CMTM1-217ENST00000533666 UPF1Q92900 1129 aaKnown RBP eCLIP18.4■□□□□ 0.54
CMTM1-217ENST00000533666 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
CMTM1-217ENST00000533666 PLSCR1O15162 318 aa18.39■□□□□ 0.53
CMTM1-217ENST00000533666 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
CMTM1-217ENST00000533666 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
CMTM1-217ENST00000533666 WDR63Q8IWG1 891 aa18.37■□□□□ 0.53
CMTM1-217ENST00000533666 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
CMTM1-217ENST00000533666 TNS1Q9HBL0 1735 aaKnown RBP18.37■□□□□ 0.53
CMTM1-217ENST00000533666 GNAI1P63096 354 aa18.36■□□□□ 0.53
CMTM1-217ENST00000533666 IL16Q14005 1332 aa18.36■□□□□ 0.53
CMTM1-217ENST00000533666 PTF1AQ7RTS3 328 aa18.36■□□□□ 0.53
CMTM1-217ENST00000533666 PALLDQ8WX93 1383 aa18.36■□□□□ 0.53
CMTM1-217ENST00000533666 ATG3Q9NT62 314 aa18.36■□□□□ 0.53
CMTM1-217ENST00000533666 SIPA1L3O60292 1781 aaPredicted RBP18.35■□□□□ 0.53
CMTM1-217ENST00000533666 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
CMTM1-217ENST00000533666 SLC27A3Q5K4L6 730 aa18.35■□□□□ 0.53
CMTM1-217ENST00000533666 ZNF790Q6PG37 636 aa18.35■□□□□ 0.53
CMTM1-217ENST00000533666 CFAP44Q96MT7 982 aa18.35■□□□□ 0.53
CMTM1-217ENST00000533666 IFT57Q9NWB7 429 aa18.35■□□□□ 0.53
CMTM1-217ENST00000533666 TSPYL4Q9UJ04 414 aa18.35■□□□□ 0.53
CMTM1-217ENST00000533666 ASAP1Q9ULH1 1129 aa18.35■□□□□ 0.53
CMTM1-217ENST00000533666 LAS1LQ9Y4W2 734 aaKnown RBP18.35■□□□□ 0.53
CMTM1-217ENST00000533666 RGPD3A6NKT7 1758 aaPredicted RBP18.34■□□□□ 0.53
CMTM1-217ENST00000533666 RGPD4Q7Z3J3 1758 aa18.34■□□□□ 0.53
CMTM1-217ENST00000533666 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
CMTM1-217ENST00000533666 FMNL2Q96PY5 1086 aa18.33■□□□□ 0.52
CMTM1-217ENST00000533666 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
CMTM1-217ENST00000533666 EN1Q05925 392 aaPredicted RBP18.32■□□□□ 0.52
CMTM1-217ENST00000533666 SLC39A6Q13433 755 aa18.32■□□□□ 0.52
CMTM1-217ENST00000533666 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
CMTM1-217ENST00000533666 LOC102724428A0A0B4J2F2 783 aa18.31■□□□□ 0.52
CMTM1-217ENST00000533666 CHL1O00533 1208 aa18.31■□□□□ 0.52
CMTM1-217ENST00000533666 PTCD1O75127 700 aaKnown RBP18.31■□□□□ 0.52
CMTM1-217ENST00000533666 SIK1P57059 783 aa18.31■□□□□ 0.52
CMTM1-217ENST00000533666 VSIG10Q8N0Z9 540 aa18.31■□□□□ 0.52
CMTM1-217ENST00000533666 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
CMTM1-217ENST00000533666 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
CMTM1-217ENST00000533666 TXNRD1Q16881 649 aa18.3■□□□□ 0.52
CMTM1-217ENST00000533666 DEFB132Q7Z7B7 95 aa18.3■□□□□ 0.52
CMTM1-217ENST00000533666 CAMKK2Q96RR4 588 aa18.3■□□□□ 0.52
CMTM1-217ENST00000533666 TEX13AQ9BXU3 409 aaPredicted RBP18.3■□□□□ 0.52
CMTM1-217ENST00000533666 MIS18AQ9NYP9 233 aa18.3■□□□□ 0.52
CMTM1-217ENST00000533666 ATP6V1AP38606 617 aa18.29■□□□□ 0.52
CMTM1-217ENST00000533666 PAPPAQ13219 1627 aa18.29■□□□□ 0.52
CMTM1-217ENST00000533666 LY75O60449 1722 aa18.29■□□□□ 0.52
CMTM1-217ENST00000533666 ZNF853P0CG23 659 aa18.28■□□□□ 0.52
CMTM1-217ENST00000533666 EZH2Q15910 746 aaKnown RBP18.28■□□□□ 0.52
CMTM1-217ENST00000533666 CHMP4AQ9BY43 222 aa18.28■□□□□ 0.52
CMTM1-217ENST00000533666 ZNF521Q96K83 1311 aa18.27■□□□□ 0.52
CMTM1-217ENST00000533666 E9PSI1 815 aa18.27■□□□□ 0.52
CMTM1-217ENST00000533666 SNRPA1P09661 255 aaKnown RBP18.27■□□□□ 0.52
CMTM1-217ENST00000533666 ZNF496Q96IT1 587 aaPredicted RBP18.27■□□□□ 0.52
CMTM1-217ENST00000533666 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.51
CMTM1-217ENST00000533666 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
CMTM1-217ENST00000533666 ZNF831Q5JPB2 1677 aa18.26■□□□□ 0.51
CMTM1-217ENST00000533666 STARD3NLO95772 234 aa18.26■□□□□ 0.51
CMTM1-217ENST00000533666 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
CMTM1-217ENST00000533666 NBPF14Q5TI25 921 aa18.26■□□□□ 0.51
CMTM1-217ENST00000533666 MBIPQ9NS73 344 aa18.26■□□□□ 0.51
CMTM1-217ENST00000533666 UBR2Q8IWV8 1755 aa18.26■□□□□ 0.51
CMTM1-217ENST00000533666 HEG1Q9ULI3 1381 aa18.26■□□□□ 0.51
CMTM1-217ENST00000533666 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
CMTM1-217ENST00000533666 KCNQ3O43525 872 aa18.24■□□□□ 0.51
CMTM1-217ENST00000533666 PROM2Q8N271 834 aa18.24■□□□□ 0.51
CMTM1-217ENST00000533666 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
CMTM1-217ENST00000533666 HOXB7P09629 217 aa18.22■□□□□ 0.51
CMTM1-217ENST00000533666 LRRC4BQ9NT99 713 aa18.22■□□□□ 0.51
CMTM1-217ENST00000533666 GIGYF1O75420 1035 aaPredicted RBP18.21■□□□□ 0.51
CMTM1-217ENST00000533666 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
CMTM1-217ENST00000533666 AK7Q96M32 723 aa18.21■□□□□ 0.51
CMTM1-217ENST00000533666 STK32BQ9NY57 414 aa18.21■□□□□ 0.51
CMTM1-217ENST00000533666 RREB1Q92766 1687 aa18.21■□□□□ 0.51
CMTM1-217ENST00000533666 FANCIQ9NVI1 1328 aa18.21■□□□□ 0.51
CMTM1-217ENST00000533666 SLFN5Q08AF3 891 aa18.2■□□□□ 0.5
CMTM1-217ENST00000533666 ITPK1Q13572 414 aa18.2■□□□□ 0.5
CMTM1-217ENST00000533666 RC3H1Q5TC82 1133 aaKnown RBP18.2■□□□□ 0.5
CMTM1-217ENST00000533666 NPM2Q86SE8 214 aaKnown RBP18.2■□□□□ 0.5
CMTM1-217ENST00000533666 DNAJC10Q8IXB1 793 aa18.2■□□□□ 0.5
CMTM1-217ENST00000533666 SLC4A9Q96Q91 983 aa18.2■□□□□ 0.5
CMTM1-217ENST00000533666 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
CMTM1-217ENST00000533666 C5P01031 1676 aa18.19■□□□□ 0.5
CMTM1-217ENST00000533666 TAF1LQ8IZX4 1826 aa18.19■□□□□ 0.5
CMTM1-217ENST00000533666 KCNQ4P56696 695 aa18.19■□□□□ 0.5
CMTM1-217ENST00000533666 CNTNAP4Q9C0A0 1308 aa18.19■□□□□ 0.5
CMTM1-217ENST00000533666 CYP19A1P11511 503 aaPredicted RBP18.18■□□□□ 0.5
CMTM1-217ENST00000533666 DUSP27Q5VZP5 1158 aa18.18■□□□□ 0.5
CMTM1-217ENST00000533666 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
CMTM1-217ENST00000533666 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
CMTM1-217ENST00000533666 CRKLP46109 303 aaKnown RBP18.17■□□□□ 0.5
CMTM1-217ENST00000533666 FLAD1Q8NFF5 587 aa18.17■□□□□ 0.5
CMTM1-217ENST00000533666 CCDC87Q9NVE4 849 aa18.17■□□□□ 0.5
CMTM1-217ENST00000533666 TFCP2L1Q9NZI6 479 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms