RNA–Protein interactions for RNA: ENST00000533348.5

GSDMD-213, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-213ENST00000533348 ITPK1Q13572 414 aa20.59■□□□□ 0.89
GSDMD-213ENST00000533348 AMIGO3Q86WK7 504 aa20.59■□□□□ 0.89
GSDMD-213ENST00000533348 ZNF784Q8NCA9 323 aaPredicted RBP20.59■□□□□ 0.89
GSDMD-213ENST00000533348 CD2APQ9Y5K6 639 aa20.59■□□□□ 0.89
GSDMD-213ENST00000533348 KDRP35968 1356 aa20.59■□□□□ 0.89
GSDMD-213ENST00000533348 ZNF530Q6P9A1 599 aaPredicted RBP20.58■□□□□ 0.89
GSDMD-213ENST00000533348 COL5A3P25940 1745 aaPredicted RBP20.58■□□□□ 0.88
GSDMD-213ENST00000533348 SCN11AQ9UI33 1791 aa20.57■□□□□ 0.88
GSDMD-213ENST00000533348 KDM6AO15550 1401 aaPredicted RBP20.57■□□□□ 0.88
GSDMD-213ENST00000533348 PHF14O94880 888 aa20.57■□□□□ 0.88
GSDMD-213ENST00000533348 IL13P35225 146 aa20.57■□□□□ 0.88
GSDMD-213ENST00000533348 AEBP1Q8IUX7 1158 aa20.57■□□□□ 0.88
GSDMD-213ENST00000533348 VIRMAQ69YN4 1812 aaKnown RBP20.56■□□□□ 0.88
GSDMD-213ENST00000533348 SULT6B1Q6IMI4 303 aa20.56■□□□□ 0.88
GSDMD-213ENST00000533348 PELP1Q8IZL8 1130 aaKnown RBP20.56■□□□□ 0.88
GSDMD-213ENST00000533348 PER1O15534 1290 aaPredicted RBP20.55■□□□□ 0.88
GSDMD-213ENST00000533348 C1orf141Q5JVX7 400 aa20.55■□□□□ 0.88
GSDMD-213ENST00000533348 GNPATO15228 680 aa20.54■□□□□ 0.88
GSDMD-213ENST00000533348 GRIN3BO60391 1043 aa20.54■□□□□ 0.88
GSDMD-213ENST00000533348 MTHFSP49914 203 aa20.54■□□□□ 0.88
GSDMD-213ENST00000533348 CABP4P57796 275 aa20.54■□□□□ 0.88
GSDMD-213ENST00000533348 SMIM5Q71RC9 77 aa20.54■□□□□ 0.88
GSDMD-213ENST00000533348 MYH14Q7Z406 1995 aaKnown RBP20.54■□□□□ 0.88
GSDMD-213ENST00000533348 RC3H1Q5TC82 1133 aaKnown RBP20.53■□□□□ 0.88
GSDMD-213ENST00000533348 SLC4A9Q96Q91 983 aa20.53■□□□□ 0.88
GSDMD-213ENST00000533348 YBX3P16989 372 aaKnown RBP eCLIP20.52■□□□□ 0.88
GSDMD-213ENST00000533348 RBM42Q9BTD8 480 aaKnown RBP20.52■□□□□ 0.88
GSDMD-213ENST00000533348 CICQ96RK0 1608 aaPredicted RBP20.5■□□□□ 0.87
GSDMD-213ENST00000533348 RTCBQ9Y3I0 505 aaKnown RBP20.5■□□□□ 0.87
GSDMD-213ENST00000533348 KIF13BQ9NQT8 1826 aa20.5■□□□□ 0.87
GSDMD-213ENST00000533348 CNTNAP4Q9C0A0 1308 aa20.5■□□□□ 0.87
GSDMD-213ENST00000533348 GOLGB1Q14789 3259 aaKnown RBP20.49■□□□□ 0.87
GSDMD-213ENST00000533348 TRAPPC3LQ5T215 181 aa20.49■□□□□ 0.87
GSDMD-213ENST00000533348 NFATC2IPQ8NCF5 419 aa20.49■□□□□ 0.87
GSDMD-213ENST00000533348 NPC1L1Q9UHC9 1359 aa20.48■□□□□ 0.87
GSDMD-213ENST00000533348 ADRA2BP18089 450 aa20.48■□□□□ 0.87
GSDMD-213ENST00000533348 AKAP4Q5JQC9 854 aa20.48■□□□□ 0.87
GSDMD-213ENST00000533348 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
GSDMD-213ENST00000533348 TJP1Q07157 1748 aa20.47■□□□□ 0.87
GSDMD-213ENST00000533348 RPS6KA4O75676 772 aa20.46■□□□□ 0.87
GSDMD-213ENST00000533348 CC2D1BQ5T0F9 858 aaKnown RBP20.46■□□□□ 0.87
GSDMD-213ENST00000533348 NLGN1Q8N2Q7 840 aa20.46■□□□□ 0.87
GSDMD-213ENST00000533348 DIAPH1O60610 1272 aaKnown RBP20.45■□□□□ 0.86
GSDMD-213ENST00000533348 ADAMTS7Q9UKP4 1686 aa20.45■□□□□ 0.86
GSDMD-213ENST00000533348 PTCD1O75127 700 aaKnown RBP20.44■□□□□ 0.86
GSDMD-213ENST00000533348 ARHGEF1Q92888 912 aaKnown RBP20.44■□□□□ 0.86
GSDMD-213ENST00000533348 MMP10P09238 476 aa20.43■□□□□ 0.86
GSDMD-213ENST00000533348 HMOX1P09601 288 aa20.43■□□□□ 0.86
GSDMD-213ENST00000533348 MRC1P22897 1456 aa20.43■□□□□ 0.86
GSDMD-213ENST00000533348 RFC4P35249 363 aa20.42■□□□□ 0.86
GSDMD-213ENST00000533348 SLC52A2Q9HAB3 445 aa20.42■□□□□ 0.86
GSDMD-213ENST00000533348 KIAA1551Q9HCM1 1747 aa20.41■□□□□ 0.86
GSDMD-213ENST00000533348 RNMTO43148 476 aaKnown RBP20.41■□□□□ 0.86
GSDMD-213ENST00000533348 GYS1P13807 737 aa20.41■□□□□ 0.86
GSDMD-213ENST00000533348 CRKLP46109 303 aaKnown RBP20.41■□□□□ 0.86
GSDMD-213ENST00000533348 LGR6Q9HBX8 967 aa20.41■□□□□ 0.86
GSDMD-213ENST00000533348 N4BP2Q86UW6 1770 aaPredicted RBP20.41■□□□□ 0.86
GSDMD-213ENST00000533348 COL3A1P02461 1466 aaPredicted RBP20.4■□□□□ 0.86
GSDMD-213ENST00000533348 MTHFSDQ2M296 383 aaKnown RBP20.39■□□□□ 0.85
GSDMD-213ENST00000533348 C1QTNF8P60827 252 aa20.38■□□□□ 0.85
GSDMD-213ENST00000533348 TGFB2P61812 414 aa20.38■□□□□ 0.85
GSDMD-213ENST00000533348 BRCA1P38398 1863 aaKnown RBP20.37■□□□□ 0.85
GSDMD-213ENST00000533348 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
GSDMD-213ENST00000533348 PXDNLA1KZ92 1463 aa20.37■□□□□ 0.85
GSDMD-213ENST00000533348 C10orf71Q711Q0 1435 aa20.36■□□□□ 0.85
GSDMD-213ENST00000533348 GIGYF1O75420 1035 aaPredicted RBP20.36■□□□□ 0.85
GSDMD-213ENST00000533348 INTS5Q6P9B9 1019 aaKnown RBP20.36■□□□□ 0.85
GSDMD-213ENST00000533348 CCDC87Q9NVE4 849 aa20.36■□□□□ 0.85
GSDMD-213ENST00000533348 PARP3Q9Y6F1 533 aa20.36■□□□□ 0.85
GSDMD-213ENST00000533348 KCPQ6ZWJ8 1503 aa20.35■□□□□ 0.85
GSDMD-213ENST00000533348 USP42Q9H9J4 1324 aaKnown RBP20.34■□□□□ 0.85
GSDMD-213ENST00000533348 DNAJC10Q8IXB1 793 aa20.34■□□□□ 0.85
GSDMD-213ENST00000533348 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
GSDMD-213ENST00000533348 ADCY9O60503 1353 aa20.34■□□□□ 0.85
GSDMD-213ENST00000533348 U2SURPO15042 1029 aaKnown RBP20.33■□□□□ 0.85
GSDMD-213ENST00000533348 SLC39A6Q13433 755 aa20.33■□□□□ 0.85
GSDMD-213ENST00000533348 WWC3Q9ULE0 1092 aa20.33■□□□□ 0.85
GSDMD-213ENST00000533348 ATP10DQ9P241 1426 aa20.33■□□□□ 0.84
GSDMD-213ENST00000533348 ARFGEF1Q9Y6D6 1849 aa20.32■□□□□ 0.84
GSDMD-213ENST00000533348 CYP19A1P11511 503 aaPredicted RBP20.32■□□□□ 0.84
GSDMD-213ENST00000533348 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
GSDMD-213ENST00000533348 VSIG10Q8N0Z9 540 aa20.32■□□□□ 0.84
GSDMD-213ENST00000533348 SRP68Q9UHB9 627 aaKnown RBP20.32■□□□□ 0.84
GSDMD-213ENST00000533348 A0A0G2JLW4 131 aa20.31■□□□□ 0.84
GSDMD-213ENST00000533348 GAS2L2Q8NHY3 880 aa20.31■□□□□ 0.84
GSDMD-213ENST00000533348 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
GSDMD-213ENST00000533348 GNAT3A8MTJ3 354 aa20.3■□□□□ 0.84
GSDMD-213ENST00000533348 FKBP8Q14318 412 aa20.3■□□□□ 0.84
GSDMD-213ENST00000533348 ZPR1O75312 459 aa20.29■□□□□ 0.84
GSDMD-213ENST00000533348 CFAP53Q96M91 514 aa20.29■□□□□ 0.84
GSDMD-213ENST00000533348 AFDNP55196 1824 aaKnown RBP20.29■□□□□ 0.84
GSDMD-213ENST00000533348 DPEP1P16444 411 aa20.28■□□□□ 0.84
GSDMD-213ENST00000533348 TM4SF1P30408 202 aa20.28■□□□□ 0.84
GSDMD-213ENST00000533348 IL17REQ8NFR9 667 aa20.28■□□□□ 0.84
GSDMD-213ENST00000533348 BCS1LQ9Y276 419 aa20.28■□□□□ 0.84
GSDMD-213ENST00000533348 DDR1Q08345 913 aa20.27■□□□□ 0.84
GSDMD-213ENST00000533348 TEFQ10587 303 aa20.27■□□□□ 0.84
GSDMD-213ENST00000533348 TTC5Q8N0Z6 440 aa20.27■□□□□ 0.84
GSDMD-213ENST00000533348 GPBP1L1Q9HC44 474 aaPredicted RBP20.27■□□□□ 0.84
GSDMD-213ENST00000533348 NARFQ9UHQ1 456 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms