RNA–Protein interactions for RNA: ENST00000533253.1

AP003390.1-201, humanhuman

TSL 5 BASIC

Gene AP003390.1, Length 523 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003390.1-201ENST00000533253 ADAMTS7Q9UKP4 1686 aa18.48■□□□□ 0.55
AP003390.1-201ENST00000533253 CABP4P57796 275 aa18.48■□□□□ 0.55
AP003390.1-201ENST00000533253 U2SURPO15042 1029 aaKnown RBP18.47■□□□□ 0.55
AP003390.1-201ENST00000533253 COL5A3P25940 1745 aaPredicted RBP18.46■□□□□ 0.55
AP003390.1-201ENST00000533253 FLAD1Q8NFF5 587 aa18.46■□□□□ 0.55
AP003390.1-201ENST00000533253 ATP6V1AP38606 617 aa18.45■□□□□ 0.54
AP003390.1-201ENST00000533253 MTHFSDQ2M296 383 aaKnown RBP18.45■□□□□ 0.54
AP003390.1-201ENST00000533253 COL23A1Q86Y22 540 aaPredicted RBP18.45■□□□□ 0.54
AP003390.1-201ENST00000533253 NFATC2IPQ8NCF5 419 aa18.45■□□□□ 0.54
AP003390.1-201ENST00000533253 NUDCQ9Y266 331 aa18.44■□□□□ 0.54
AP003390.1-201ENST00000533253 MYH14Q7Z406 1995 aaKnown RBP18.44■□□□□ 0.54
AP003390.1-201ENST00000533253 ITPK1Q13572 414 aa18.43■□□□□ 0.54
AP003390.1-201ENST00000533253 LINC00116Q8NCU8 138 aa18.43■□□□□ 0.54
AP003390.1-201ENST00000533253 AK7Q96M32 723 aa18.43■□□□□ 0.54
AP003390.1-201ENST00000533253 CICQ96RK0 1608 aaPredicted RBP18.42■□□□□ 0.54
AP003390.1-201ENST00000533253 MRC1P22897 1456 aa18.42■□□□□ 0.54
AP003390.1-201ENST00000533253 RNMTO43148 476 aaKnown RBP18.42■□□□□ 0.54
AP003390.1-201ENST00000533253 ARXQ96QS3 562 aa18.42■□□□□ 0.54
AP003390.1-201ENST00000533253 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
AP003390.1-201ENST00000533253 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
AP003390.1-201ENST00000533253 MSH5O43196 834 aa18.41■□□□□ 0.54
AP003390.1-201ENST00000533253 POLD1P28340 1107 aa18.41■□□□□ 0.54
AP003390.1-201ENST00000533253 SLC4A9Q96Q91 983 aa18.41■□□□□ 0.54
AP003390.1-201ENST00000533253 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
AP003390.1-201ENST00000533253 SLC52A2Q9HAB3 445 aa18.41■□□□□ 0.54
AP003390.1-201ENST00000533253 GAS2L2Q8NHY3 880 aa18.4■□□□□ 0.54
AP003390.1-201ENST00000533253 RSPH6AQ9H0K4 717 aa18.4■□□□□ 0.54
AP003390.1-201ENST00000533253 TJP1Q07157 1748 aa18.4■□□□□ 0.54
AP003390.1-201ENST00000533253 SSFA2P28290 1259 aa18.39■□□□□ 0.53
AP003390.1-201ENST00000533253 FHDC1Q9C0D6 1143 aaPredicted RBP18.39■□□□□ 0.53
AP003390.1-201ENST00000533253 UBR2Q8IWV8 1755 aa18.38■□□□□ 0.53
AP003390.1-201ENST00000533253 FCHSD2O94868 740 aa18.38■□□□□ 0.53
AP003390.1-201ENST00000533253 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
AP003390.1-201ENST00000533253 RC3H1Q5TC82 1133 aaKnown RBP18.38■□□□□ 0.53
AP003390.1-201ENST00000533253 AMIGO3Q86WK7 504 aa18.38■□□□□ 0.53
AP003390.1-201ENST00000533253 SYT17Q9BSW7 474 aa18.38■□□□□ 0.53
AP003390.1-201ENST00000533253 MAP3K5Q99683 1374 aa18.38■□□□□ 0.53
AP003390.1-201ENST00000533253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.37■□□□□ 0.53
AP003390.1-201ENST00000533253 GNAT3A8MTJ3 354 aa18.37■□□□□ 0.53
AP003390.1-201ENST00000533253 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
AP003390.1-201ENST00000533253 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
AP003390.1-201ENST00000533253 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.53
AP003390.1-201ENST00000533253 DLG5Q8TDM6 1919 aa18.37■□□□□ 0.53
AP003390.1-201ENST00000533253 GNPATO15228 680 aa18.36■□□□□ 0.53
AP003390.1-201ENST00000533253 PTCD1O75127 700 aaKnown RBP18.36■□□□□ 0.53
AP003390.1-201ENST00000533253 RALBP1Q15311 655 aa18.36■□□□□ 0.53
AP003390.1-201ENST00000533253 PHACTR3Q96KR7 559 aa18.36■□□□□ 0.53
AP003390.1-201ENST00000533253 CNTNAP4Q9C0A0 1308 aa18.36■□□□□ 0.53
AP003390.1-201ENST00000533253 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
AP003390.1-201ENST00000533253 PHF14O94880 888 aa18.35■□□□□ 0.53
AP003390.1-201ENST00000533253 SMIM5Q71RC9 77 aa18.34■□□□□ 0.53
AP003390.1-201ENST00000533253 IL17REQ8NFR9 667 aa18.34■□□□□ 0.53
AP003390.1-201ENST00000533253 RTCBQ9Y3I0 505 aaKnown RBP18.34■□□□□ 0.53
AP003390.1-201ENST00000533253 C4AP0C0L4 1744 aa18.33■□□□□ 0.52
AP003390.1-201ENST00000533253 MSL1Q68DK7 614 aa18.33■□□□□ 0.52
AP003390.1-201ENST00000533253 CHD4Q14839 1912 aa18.33■□□□□ 0.52
AP003390.1-201ENST00000533253 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.52
AP003390.1-201ENST00000533253 RPS6KA4O75676 772 aa18.32■□□□□ 0.52
AP003390.1-201ENST00000533253 ADRA2BP18089 450 aa18.32■□□□□ 0.52
AP003390.1-201ENST00000533253 SLC39A6Q13433 755 aa18.32■□□□□ 0.52
AP003390.1-201ENST00000533253 TRAPPC3LQ5T215 181 aa18.32■□□□□ 0.52
AP003390.1-201ENST00000533253 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
AP003390.1-201ENST00000533253 TEFQ10587 303 aa18.31■□□□□ 0.52
AP003390.1-201ENST00000533253 CRKLP46109 303 aaKnown RBP18.29■□□□□ 0.52
AP003390.1-201ENST00000533253 VSIG10Q8N0Z9 540 aa18.29■□□□□ 0.52
AP003390.1-201ENST00000533253 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
AP003390.1-201ENST00000533253 DNAJC10Q8IXB1 793 aa18.28■□□□□ 0.52
AP003390.1-201ENST00000533253 ARHGEF1Q92888 912 aaKnown RBP18.28■□□□□ 0.52
AP003390.1-201ENST00000533253 INTS5Q6P9B9 1019 aaKnown RBP18.27■□□□□ 0.52
AP003390.1-201ENST00000533253 TTC5Q8N0Z6 440 aa18.27■□□□□ 0.52
AP003390.1-201ENST00000533253 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
AP003390.1-201ENST00000533253 MYBBP1AQ9BQG0 1328 aaKnown RBP18.26■□□□□ 0.51
AP003390.1-201ENST00000533253 KIF13BQ9NQT8 1826 aa18.26■□□□□ 0.51
AP003390.1-201ENST00000533253 NEFMP07197 916 aa18.26■□□□□ 0.51
AP003390.1-201ENST00000533253 CYP19A1P11511 503 aaPredicted RBP18.26■□□□□ 0.51
AP003390.1-201ENST00000533253 RFC4P35249 363 aa18.26■□□□□ 0.51
AP003390.1-201ENST00000533253 ZNF790Q6PG37 636 aa18.26■□□□□ 0.51
AP003390.1-201ENST00000533253 RTF1Q92541 710 aaKnown RBP18.26■□□□□ 0.51
AP003390.1-201ENST00000533253 PNNQ9H307 717 aaKnown RBP18.26■□□□□ 0.51
AP003390.1-201ENST00000533253 CD2APQ9Y5K6 639 aa18.26■□□□□ 0.51
AP003390.1-201ENST00000533253 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
AP003390.1-201ENST00000533253 PLEKHF1Q96S99 279 aa18.25■□□□□ 0.51
AP003390.1-201ENST00000533253 CCDC87Q9NVE4 849 aa18.25■□□□□ 0.51
AP003390.1-201ENST00000533253 HEG1Q9ULI3 1381 aa18.23■□□□□ 0.51
AP003390.1-201ENST00000533253 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
AP003390.1-201ENST00000533253 GYS1P13807 737 aa18.23■□□□□ 0.51
AP003390.1-201ENST00000533253 MCM10Q7L590 875 aa18.23■□□□□ 0.51
AP003390.1-201ENST00000533253 NLGN2Q8NFZ4 835 aa18.23■□□□□ 0.51
AP003390.1-201ENST00000533253 ZNF496Q96IT1 587 aaPredicted RBP18.23■□□□□ 0.51
AP003390.1-201ENST00000533253 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
AP003390.1-201ENST00000533253 SOS1Q07889 1333 aaPredicted RBP18.22■□□□□ 0.51
AP003390.1-201ENST00000533253 STARD3NLO95772 234 aa18.21■□□□□ 0.51
AP003390.1-201ENST00000533253 MMP10P09238 476 aa18.21■□□□□ 0.51
AP003390.1-201ENST00000533253 FMNL2Q96PY5 1086 aa18.21■□□□□ 0.51
AP003390.1-201ENST00000533253 USP42Q9H9J4 1324 aaKnown RBP18.21■□□□□ 0.51
AP003390.1-201ENST00000533253 UTRNP46939 3433 aa18.2■□□□□ 0.5
AP003390.1-201ENST00000533253 DCTN1Q14203 1278 aa18.2■□□□□ 0.5
AP003390.1-201ENST00000533253 NFE2L2Q16236 605 aa18.2■□□□□ 0.5
AP003390.1-201ENST00000533253 PRKRIP1Q9H875 184 aaPredicted RBP18.2■□□□□ 0.5
AP003390.1-201ENST00000533253 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms