RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 HDGFL1Q5TGJ6 251 aa18.98■□□□□ 0.63
CACNA1E-208ENST00000533229 SOS1Q07889 1333 aaPredicted RBP18.98■□□□□ 0.63
CACNA1E-208ENST00000533229 USP26Q9BXU7 913 aa18.97■□□□□ 0.63
CACNA1E-208ENST00000533229 BRPF3Q9ULD4 1205 aa18.97■□□□□ 0.63
CACNA1E-208ENST00000533229 KCNQ3O43525 872 aa18.97■□□□□ 0.63
CACNA1E-208ENST00000533229 GCP02774 474 aa18.97■□□□□ 0.63
CACNA1E-208ENST00000533229 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
CACNA1E-208ENST00000533229 USP44Q9H0E7 712 aa18.97■□□□□ 0.63
CACNA1E-208ENST00000533229 LTN1O94822 1766 aa18.96■□□□□ 0.63
CACNA1E-208ENST00000533229 ZNF142P52746 1687 aaPredicted RBP18.96■□□□□ 0.63
CACNA1E-208ENST00000533229 GNAI3P08754 354 aa18.96■□□□□ 0.63
CACNA1E-208ENST00000533229 PDE1AP54750 535 aa18.96■□□□□ 0.63
CACNA1E-208ENST00000533229 EIF4A1P60842 406 aaKnown RBP18.96■□□□□ 0.63
CACNA1E-208ENST00000533229 FAM208AQ9UK61 1670 aaKnown RBP18.96■□□□□ 0.63
CACNA1E-208ENST00000533229 NPHP4O75161 1426 aaPredicted RBP18.96■□□□□ 0.63
CACNA1E-208ENST00000533229 ATP8B2P98198 1209 aa18.95■□□□□ 0.62
CACNA1E-208ENST00000533229 OSBPL3Q9H4L5 887 aa18.95■□□□□ 0.62
CACNA1E-208ENST00000533229 LRRFIP2Q9Y608 721 aaKnown RBP18.95■□□□□ 0.62
CACNA1E-208ENST00000533229 K7ELQ4 463 aaPredicted RBP18.95■□□□□ 0.62
CACNA1E-208ENST00000533229 EIF2S2P20042 333 aaKnown RBP18.95■□□□□ 0.62
CACNA1E-208ENST00000533229 TSHZ3Q63HK5 1081 aa18.95■□□□□ 0.62
CACNA1E-208ENST00000533229 ARHGEF25Q86VW2 580 aa18.95■□□□□ 0.62
CACNA1E-208ENST00000533229 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
CACNA1E-208ENST00000533229 SALL3Q9BXA9 1300 aa18.94■□□□□ 0.62
CACNA1E-208ENST00000533229 MPRIPQ6WCQ1 1025 aa18.94■□□□□ 0.62
CACNA1E-208ENST00000533229 LMOD2Q6P5Q4 547 aa18.92■□□□□ 0.62
CACNA1E-208ENST00000533229 AXIN2Q9Y2T1 843 aa18.92■□□□□ 0.62
CACNA1E-208ENST00000533229 AKAP4Q5JQC9 854 aa18.92■□□□□ 0.62
CACNA1E-208ENST00000533229 ZNF530Q6P9A1 599 aaPredicted RBP18.92■□□□□ 0.62
CACNA1E-208ENST00000533229 LRRCC1Q9C099 1032 aa18.92■□□□□ 0.62
CACNA1E-208ENST00000533229 MED1Q15648 1581 aaPredicted RBP18.91■□□□□ 0.62
CACNA1E-208ENST00000533229 ADAMTSL3P82987 1691 aa18.91■□□□□ 0.62
CACNA1E-208ENST00000533229 TNPO1Q92973 898 aaKnown RBP18.91■□□□□ 0.62
CACNA1E-208ENST00000533229 CHPF2Q9P2E5 772 aa18.91■□□□□ 0.62
CACNA1E-208ENST00000533229 IBTKQ9P2D0 1353 aaPredicted RBP18.91■□□□□ 0.62
CACNA1E-208ENST00000533229 BTBD11A6QL63 1104 aa18.9■□□□□ 0.62
CACNA1E-208ENST00000533229 ANXA1P04083 346 aa18.9■□□□□ 0.62
CACNA1E-208ENST00000533229 UBTFL1P0CB47 393 aaPredicted RBP18.89■□□□□ 0.62
CACNA1E-208ENST00000533229 RABEP1Q15276 862 aa18.89■□□□□ 0.62
CACNA1E-208ENST00000533229 PLEKHO1Q53GL0 409 aaPredicted RBP18.89■□□□□ 0.62
CACNA1E-208ENST00000533229 ANKRD24Q8TF21 1146 aa18.89■□□□□ 0.62
CACNA1E-208ENST00000533229 CIZ1Q9ULV3 898 aaPredicted RBP18.89■□□□□ 0.62
CACNA1E-208ENST00000533229 PXDNLA1KZ92 1463 aa18.89■□□□□ 0.61
CACNA1E-208ENST00000533229 EIF5BO60841 1220 aaKnown RBP18.89■□□□□ 0.61
CACNA1E-208ENST00000533229 HSP90AA1P07900 732 aaKnown RBP18.89■□□□□ 0.61
CACNA1E-208ENST00000533229 TEFQ10587 303 aa18.89■□□□□ 0.61
CACNA1E-208ENST00000533229 RAB3GAP1Q15042 981 aa18.89■□□□□ 0.61
CACNA1E-208ENST00000533229 CASC1Q6TDU7 716 aa18.89■□□□□ 0.61
CACNA1E-208ENST00000533229 PXDNQ92626 1479 aa18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 TRAK2O60296 914 aa18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 SETD1BQ9UPS6 1966 aaKnown RBP18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 RNMTO43148 476 aaKnown RBP18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 HOXB7P09629 217 aa18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 NBPF7P0C2Y1 421 aaPredicted RBP18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 MX1P20591 662 aa18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 KRT28Q7Z3Y7 464 aa18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 SRCIN1Q9C0H9 1055 aa18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 GZF1Q9H116 711 aaPredicted RBP18.88■□□□□ 0.61
CACNA1E-208ENST00000533229 AMOTQ4VCS5 1084 aa18.87■□□□□ 0.61
CACNA1E-208ENST00000533229 PROSER2Q86WR7 435 aaPredicted RBP18.87■□□□□ 0.61
CACNA1E-208ENST00000533229 SSH3Q8TE77 659 aa18.87■□□□□ 0.61
CACNA1E-208ENST00000533229 RGPD2P0DJD1 1756 aa18.87■□□□□ 0.61
CACNA1E-208ENST00000533229 PHRF1Q9P1Y6 1649 aaKnown RBP18.87■□□□□ 0.61
CACNA1E-208ENST00000533229 SLIT3O75094 1523 aa18.87■□□□□ 0.61
CACNA1E-208ENST00000533229 NCAPD2Q15021 1401 aa18.86■□□□□ 0.61
CACNA1E-208ENST00000533229 ERC2O15083 957 aa18.86■□□□□ 0.61
CACNA1E-208ENST00000533229 BEND3Q5T5X7 828 aa18.86■□□□□ 0.61
CACNA1E-208ENST00000533229 PPP1R42Q7Z4L9 355 aa18.86■□□□□ 0.61
CACNA1E-208ENST00000533229 REC8O95072 547 aa18.85■□□□□ 0.61
CACNA1E-208ENST00000533229 IL1RAPL2Q9NP60 686 aa18.85■□□□□ 0.61
CACNA1E-208ENST00000533229 DNAAF4Q8WXU2 420 aa18.85■□□□□ 0.61
CACNA1E-208ENST00000533229 PRAMEF22A3QJZ6 481 aa18.84■□□□□ 0.61
CACNA1E-208ENST00000533229 C1orf141Q5JVX7 400 aa18.84■□□□□ 0.61
CACNA1E-208ENST00000533229 UNC5CLQ8IV45 518 aa18.84■□□□□ 0.61
CACNA1E-208ENST00000533229 STAP2Q9UGK3 403 aa18.84■□□□□ 0.61
CACNA1E-208ENST00000533229 DDX11L8A8MPP1 907 aa18.83■□□□□ 0.61
CACNA1E-208ENST00000533229 POLA2Q14181 598 aa18.83■□□□□ 0.61
CACNA1E-208ENST00000533229 ADCY9O60503 1353 aa18.83■□□□□ 0.61
CACNA1E-208ENST00000533229 C1orf167Q5SNV9 1468 aa18.83■□□□□ 0.61
CACNA1E-208ENST00000533229 ANO8Q9HCE9 1232 aaPredicted RBP18.83■□□□□ 0.6
CACNA1E-208ENST00000533229 KDM3BQ7LBC6 1761 aa18.83■□□□□ 0.6
CACNA1E-208ENST00000533229 GIGYF1O75420 1035 aaPredicted RBP18.82■□□□□ 0.6
CACNA1E-208ENST00000533229 SSFA2P28290 1259 aa18.82■□□□□ 0.6
CACNA1E-208ENST00000533229 ZC3H6P61129 1189 aaKnown RBP18.82■□□□□ 0.6
CACNA1E-208ENST00000533229 PROSER3Q2NL68 480 aa18.82■□□□□ 0.6
CACNA1E-208ENST00000533229 C19orf44Q9H6X5 657 aa18.82■□□□□ 0.6
CACNA1E-208ENST00000533229 LMO7Q8WWI1 1683 aa18.82■□□□□ 0.6
CACNA1E-208ENST00000533229 SURF6O75683 361 aaKnown RBP18.82■□□□□ 0.6
CACNA1E-208ENST00000533229 RILPL2Q969X0 211 aa18.82■□□□□ 0.6
CACNA1E-208ENST00000533229 ESYT1Q9BSJ8 1104 aa18.82■□□□□ 0.6
CACNA1E-208ENST00000533229 TRIM6-TRIM34B2RNG4 842 aa18.81■□□□□ 0.6
CACNA1E-208ENST00000533229 SRGAP3O43295 1099 aa18.81■□□□□ 0.6
CACNA1E-208ENST00000533229 NUTM1Q86Y26 1132 aa18.81■□□□□ 0.6
CACNA1E-208ENST00000533229 DDX17Q92841 729 aaKnown RBP18.81■□□□□ 0.6
CACNA1E-208ENST00000533229 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
CACNA1E-208ENST00000533229 CHMLP26374 656 aa18.8■□□□□ 0.6
CACNA1E-208ENST00000533229 DBF4Q9UBU7 674 aaPredicted RBP18.8■□□□□ 0.6
CACNA1E-208ENST00000533229 CACNA1FO60840 1977 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms