RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 GVINP1Q7Z2Y8 2422 aa2.86□□□□□ -1.95
KNL1-211ENST00000533001 ESCO1Q5FWF5 840 aa2.86□□□□□ -1.95
KNL1-211ENST00000533001 BCL11BQ9C0K0 894 aaPredicted RBP2.86□□□□□ -1.95
KNL1-211ENST00000533001 ATP10DQ9P241 1426 aa2.86□□□□□ -1.95
KNL1-211ENST00000533001 NUTM2FA1L443 756 aa2.86□□□□□ -1.95
KNL1-211ENST00000533001 CARD10Q9BWT7 1032 aa2.86□□□□□ -1.95
KNL1-211ENST00000533001 HELZ2Q9BYK8 2649 aaKnown RBP2.86□□□□□ -1.95
KNL1-211ENST00000533001 RGS19P49795 217 aa2.86□□□□□ -1.95
KNL1-211ENST00000533001 NUDT16Q96DE0 195 aaKnown RBP2.86□□□□□ -1.95
KNL1-211ENST00000533001 CCDC61Q9Y6R9 512 aa2.86□□□□□ -1.95
KNL1-211ENST00000533001 A0A1W2PP64 1363 aa2.86□□□□□ -1.95
KNL1-211ENST00000533001 ANKRD36BQ8N2N9 1353 aa2.86□□□□□ -1.95
KNL1-211ENST00000533001 DOCK3Q8IZD9 2030 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 FLNCQ14315 2725 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 INSRP06213 1382 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 ADRA2BP18089 450 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 SCN4AP35499 1836 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 USP47Q96K76 1375 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 BCL2L12Q9HB09 334 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 CARMIL3Q8ND23 1372 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 CAP1Q01518 475 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 THRAP3Q9Y2W1 955 aaKnown RBP2.85□□□□□ -1.95
KNL1-211ENST00000533001 TRPM7Q96QT4 1865 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 NUP98P52948 1817 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 LRP10Q7Z4F1 713 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 C7orf43Q8WVR3 580 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 HIRIP3Q9BW71 556 aaPredicted RBP2.85□□□□□ -1.95
KNL1-211ENST00000533001 RNF39Q9H2S5 420 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 CELSR1Q9NYQ6 3014 aa2.85□□□□□ -1.95
KNL1-211ENST00000533001 FAM196AQ6ZSG2 479 aa2.84□□□□□ -1.95
KNL1-211ENST00000533001 COL23A1Q86Y22 540 aaPredicted RBP2.84□□□□□ -1.95
KNL1-211ENST00000533001 GCN1Q92616 2671 aaKnown RBP2.84□□□□□ -1.95
KNL1-211ENST00000533001 TTC21BQ7Z4L5 1316 aa2.84□□□□□ -1.95
KNL1-211ENST00000533001 HTRA3P83110 453 aa2.84□□□□□ -1.96
KNL1-211ENST00000533001 ITPK1Q13572 414 aa2.84□□□□□ -1.96
KNL1-211ENST00000533001 PLEKHG2Q9H7P9 1386 aa2.84□□□□□ -1.96
KNL1-211ENST00000533001 NCOR2Q9Y618 2525 aa2.83□□□□□ -1.96
KNL1-211ENST00000533001 MAP3K19Q56UN5 1328 aa2.83□□□□□ -1.96
KNL1-211ENST00000533001 ZBTB7AO95365 584 aa2.83□□□□□ -1.96
KNL1-211ENST00000533001 MTFR1LQ9H019 292 aa2.83□□□□□ -1.96
KNL1-211ENST00000533001 LAMB4A4D0S4 1761 aa2.83□□□□□ -1.96
KNL1-211ENST00000533001 HEG1Q9ULI3 1381 aa2.83□□□□□ -1.96
KNL1-211ENST00000533001 TCP11L2Q8N4U5 519 aa2.83□□□□□ -1.96
KNL1-211ENST00000533001 ANKRD36CQ5JPF3 1778 aa2.83□□□□□ -1.96
KNL1-211ENST00000533001 NPC1L1Q9UHC9 1359 aa2.83□□□□□ -1.96
KNL1-211ENST00000533001 DDX60Q8IY21 1712 aaKnown RBP2.83□□□□□ -1.96
KNL1-211ENST00000533001 RIF1Q5UIP0 2472 aaKnown RBP2.83□□□□□ -1.96
KNL1-211ENST00000533001 ZNF318Q5VUA4 2279 aa2.82□□□□□ -1.96
KNL1-211ENST00000533001 ZSWIM8A7E2V4 1837 aa2.82□□□□□ -1.96
KNL1-211ENST00000533001 ZC3H6P61129 1189 aaKnown RBP2.82□□□□□ -1.96
KNL1-211ENST00000533001 LRBAP50851 2863 aa2.82□□□□□ -1.96
KNL1-211ENST00000533001 DDR1Q08345 913 aa2.82□□□□□ -1.96
KNL1-211ENST00000533001 YY1P25490 414 aa2.82□□□□□ -1.96
KNL1-211ENST00000533001 NBPF6Q5VWK0 638 aa2.82□□□□□ -1.96
KNL1-211ENST00000533001 NBPF4Q96M43 638 aa2.82□□□□□ -1.96
KNL1-211ENST00000533001 PASKQ96RG2 1323 aa2.82□□□□□ -1.96
KNL1-211ENST00000533001 C11orf95C9JLR9 678 aaPredicted RBP2.81□□□□□ -1.96
KNL1-211ENST00000533001 CHGAP10645 457 aaKnown RBP2.81□□□□□ -1.96
KNL1-211ENST00000533001 TACC2O95359 2948 aa2.81□□□□□ -1.96
KNL1-211ENST00000533001 EDC4Q6P2E9 1401 aaKnown RBP2.81□□□□□ -1.96
KNL1-211ENST00000533001 CEP250Q9BV73 2442 aa2.81□□□□□ -1.96
KNL1-211ENST00000533001 IGSF10Q6WRI0 2623 aa2.81□□□□□ -1.96
KNL1-211ENST00000533001 KLRG2A4D1S0 409 aaPredicted RBP2.81□□□□□ -1.96
KNL1-211ENST00000533001 ITGBL1O95965 494 aaPredicted RBP2.81□□□□□ -1.96
KNL1-211ENST00000533001 CDK19Q9BWU1 502 aa2.81□□□□□ -1.96
KNL1-211ENST00000533001 CELSR2Q9HCU4 2923 aa2.81□□□□□ -1.96
KNL1-211ENST00000533001 NFKBIEO00221 500 aa2.81□□□□□ -1.96
KNL1-211ENST00000533001 PER1O15534 1290 aaPredicted RBP2.81□□□□□ -1.96
KNL1-211ENST00000533001 TRAK1Q9UPV9 953 aa2.81□□□□□ -1.96
KNL1-211ENST00000533001 FYB1O15117 783 aa2.81□□□□□ -1.96
KNL1-211ENST00000533001 TM4SF1P30408 202 aa2.81□□□□□ -1.96
KNL1-211ENST00000533001 SPON1Q9HCB6 807 aa2.81□□□□□ -1.96
KNL1-211ENST00000533001 FASNP49327 2511 aaKnown RBP2.81□□□□□ -1.96
KNL1-211ENST00000533001 MINK1Q8N4C8 1332 aaPredicted RBP2.8□□□□□ -1.96
KNL1-211ENST00000533001 POTEIP0CG38 1075 aa2.8□□□□□ -1.96
KNL1-211ENST00000533001 POTEJP0CG39 1038 aa2.8□□□□□ -1.96
KNL1-211ENST00000533001 PUS7Q96PZ0 661 aaKnown RBP2.8□□□□□ -1.96
KNL1-211ENST00000533001 CABP1Q9NZU7 370 aa2.8□□□□□ -1.96
KNL1-211ENST00000533001 HSPA6P17066 643 aa2.8□□□□□ -1.96
KNL1-211ENST00000533001 CLCN6P51797 869 aa2.8□□□□□ -1.96
KNL1-211ENST00000533001 PTPRFP10586 1907 aa2.8□□□□□ -1.96
KNL1-211ENST00000533001 APBA3O96018 575 aa2.8□□□□□ -1.96
KNL1-211ENST00000533001 OTOFQ9HC10 1997 aa2.8□□□□□ -1.96
KNL1-211ENST00000533001 BAG6P46379 1132 aa2.8□□□□□ -1.96
KNL1-211ENST00000533001 NME9Q86XW9 330 aa2.79□□□□□ -1.96
KNL1-211ENST00000533001 LINC00116Q8NCU8 138 aa2.79□□□□□ -1.96
KNL1-211ENST00000533001 L3MBTL2Q969R5 705 aa2.79□□□□□ -1.96
KNL1-211ENST00000533001 STK26Q9P289 416 aa2.79□□□□□ -1.96
KNL1-211ENST00000533001 UTP20O75691 2785 aaKnown RBP2.79□□□□□ -1.96
KNL1-211ENST00000533001 TPRP12270 2363 aaKnown RBP2.79□□□□□ -1.96
KNL1-211ENST00000533001 PRRC2CQ9Y520 2896 aaKnown RBP2.79□□□□□ -1.96
KNL1-211ENST00000533001 NMRK2Q9NPI5 230 aa2.79□□□□□ -1.96
KNL1-211ENST00000533001 FLNBO75369 2602 aaKnown RBP2.79□□□□□ -1.96
KNL1-211ENST00000533001 CCDC7Q96M83 1385 aa2.79□□□□□ -1.96
KNL1-211ENST00000533001 ARXQ96QS3 562 aa2.79□□□□□ -1.96
KNL1-211ENST00000533001 SLC4A1APQ9BWU0 796 aaKnown RBP2.79□□□□□ -1.96
KNL1-211ENST00000533001 SLC12A5Q9H2X9 1139 aa2.79□□□□□ -1.96
KNL1-211ENST00000533001 DCHS2Q6V1P9 2916 aa2.79□□□□□ -1.96
KNL1-211ENST00000533001 CEMIPQ8WUJ3 1361 aa2.79□□□□□ -1.96
KNL1-211ENST00000533001 PIGBQ92521 554 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms