RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 MPRIPQ6WCQ1 1025 aa18.72■□□□□ 0.59
COL16A1-217ENST00000532877 IL17REQ8NFR9 667 aa18.72■□□□□ 0.59
COL16A1-217ENST00000532877 MRC1P22897 1456 aa18.71■□□□□ 0.59
COL16A1-217ENST00000532877 CHD4Q14839 1912 aa18.71■□□□□ 0.59
COL16A1-217ENST00000532877 KCNQ2O43526 872 aa18.71■□□□□ 0.59
COL16A1-217ENST00000532877 NKX1-1Q15270 411 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-217ENST00000532877 DCAF5Q96JK2 942 aa18.71■□□□□ 0.59
COL16A1-217ENST00000532877 SIPA1L3O60292 1781 aaPredicted RBP18.7■□□□□ 0.58
COL16A1-217ENST00000532877 RNMTO43148 476 aaKnown RBP18.7■□□□□ 0.58
COL16A1-217ENST00000532877 WDR63Q8IWG1 891 aa18.7■□□□□ 0.58
COL16A1-217ENST00000532877 MARCH10Q8NA82 808 aaPredicted RBP18.7■□□□□ 0.58
COL16A1-217ENST00000532877 DOT1LQ8TEK3 1739 aa18.7■□□□□ 0.58
COL16A1-217ENST00000532877 LGR6Q9HBX8 967 aa18.7■□□□□ 0.58
COL16A1-217ENST00000532877 SPON1Q9HCB6 807 aa18.7■□□□□ 0.58
COL16A1-217ENST00000532877 CALD1Q05682 793 aaKnown RBP18.68■□□□□ 0.58
COL16A1-217ENST00000532877 GOLGA2Q08379 1002 aa18.68■□□□□ 0.58
COL16A1-217ENST00000532877 PDE3BQ13370 1112 aa18.68■□□□□ 0.58
COL16A1-217ENST00000532877 NBPF14Q5TI25 921 aa18.68■□□□□ 0.58
COL16A1-217ENST00000532877 IL16Q14005 1332 aa18.68■□□□□ 0.58
COL16A1-217ENST00000532877 SPINK5Q9NQ38 1064 aaPredicted RBP18.67■□□□□ 0.58
COL16A1-217ENST00000532877 ITGB4P16144 1822 aa18.66■□□□□ 0.58
COL16A1-217ENST00000532877 CDCA7LQ96GN5 454 aa18.66■□□□□ 0.58
COL16A1-217ENST00000532877 TEFQ10587 303 aa18.65■□□□□ 0.58
COL16A1-217ENST00000532877 IFT57Q9NWB7 429 aa18.65■□□□□ 0.58
COL16A1-217ENST00000532877 E9PSI1 815 aa18.64■□□□□ 0.57
COL16A1-217ENST00000532877 SLC52A2Q9HAB3 445 aa18.64■□□□□ 0.57
COL16A1-217ENST00000532877 BCL9O00512 1426 aa18.64■□□□□ 0.57
COL16A1-217ENST00000532877 KDM3BQ7LBC6 1761 aa18.63■□□□□ 0.57
COL16A1-217ENST00000532877 ERVV-2B6SEH9 535 aa18.63■□□□□ 0.57
COL16A1-217ENST00000532877 ZNF853P0CG23 659 aa18.63■□□□□ 0.57
COL16A1-217ENST00000532877 GNAI1P63096 354 aa18.63■□□□□ 0.57
COL16A1-217ENST00000532877 SLFN5Q08AF3 891 aa18.63■□□□□ 0.57
COL16A1-217ENST00000532877 CFAP44Q96MT7 982 aa18.63■□□□□ 0.57
COL16A1-217ENST00000532877 ANO8Q9HCE9 1232 aaPredicted RBP18.63■□□□□ 0.57
COL16A1-217ENST00000532877 KAT6BQ8WYB5 2073 aa18.62■□□□□ 0.57
COL16A1-217ENST00000532877 PLSCR1O15162 318 aa18.62■□□□□ 0.57
COL16A1-217ENST00000532877 TAF7Q15545 349 aaPredicted RBP18.62■□□□□ 0.57
COL16A1-217ENST00000532877 ZNF784Q8NCA9 323 aaPredicted RBP18.62■□□□□ 0.57
COL16A1-217ENST00000532877 MYH16Q9H6N6 1097 aa18.62■□□□□ 0.57
COL16A1-217ENST00000532877 LAS1LQ9Y4W2 734 aaKnown RBP18.62■□□□□ 0.57
COL16A1-217ENST00000532877 PAPPAQ13219 1627 aa18.62■□□□□ 0.57
COL16A1-217ENST00000532877 NHSQ6T4R5 1651 aa18.61■□□□□ 0.57
COL16A1-217ENST00000532877 FANCIQ9NVI1 1328 aa18.61■□□□□ 0.57
COL16A1-217ENST00000532877 CABP4P57796 275 aa18.61■□□□□ 0.57
COL16A1-217ENST00000532877 NFATC2IPQ8NCF5 419 aa18.61■□□□□ 0.57
COL16A1-217ENST00000532877 TSR2Q969E8 191 aaKnown RBP18.61■□□□□ 0.57
COL16A1-217ENST00000532877 PPP1R1BQ9UD71 204 aaPredicted RBP18.61■□□□□ 0.57
COL16A1-217ENST00000532877 CHL1O00533 1208 aa18.6■□□□□ 0.57
COL16A1-217ENST00000532877 PTGER2P43116 358 aa18.6■□□□□ 0.57
COL16A1-217ENST00000532877 DUSP27Q5VZP5 1158 aa18.6■□□□□ 0.57
COL16A1-217ENST00000532877 TRMT2AQ8IZ69 625 aaKnown RBP18.6■□□□□ 0.57
COL16A1-217ENST00000532877 MBIPQ9NS73 344 aa18.6■□□□□ 0.57
COL16A1-217ENST00000532877 PROM2Q8N271 834 aa18.59■□□□□ 0.57
COL16A1-217ENST00000532877 PDGFDQ9GZP0 370 aaPredicted RBP18.59■□□□□ 0.57
COL16A1-217ENST00000532877 BABAM1Q9NWV8 329 aa18.59■□□□□ 0.57
COL16A1-217ENST00000532877 TMOD3Q9NYL9 352 aa18.59■□□□□ 0.57
COL16A1-217ENST00000532877 MIS18AQ9NYP9 233 aa18.59■□□□□ 0.57
COL16A1-217ENST00000532877 TSPYL4Q9UJ04 414 aa18.59■□□□□ 0.57
COL16A1-217ENST00000532877 BTBD11A6QL63 1104 aa18.58■□□□□ 0.56
COL16A1-217ENST00000532877 ACSBG1Q96GR2 724 aa18.58■□□□□ 0.56
COL16A1-217ENST00000532877 PRIM1P49642 420 aaKnown RBP18.57■□□□□ 0.56
COL16A1-217ENST00000532877 PIGBQ92521 554 aa18.57■□□□□ 0.56
COL16A1-217ENST00000532877 SYTL4Q96C24 671 aaPredicted RBP18.57■□□□□ 0.56
COL16A1-217ENST00000532877 UBR2Q8IWV8 1755 aa18.57■□□□□ 0.56
COL16A1-217ENST00000532877 PTF1AQ7RTS3 328 aa18.56■□□□□ 0.56
COL16A1-217ENST00000532877 DCAF8L1A6NGE4 600 aa18.55■□□□□ 0.56
COL16A1-217ENST00000532877 SGIP1Q9BQI5 828 aa18.55■□□□□ 0.56
COL16A1-217ENST00000532877 BTAF1O14981 1849 aa18.55■□□□□ 0.56
COL16A1-217ENST00000532877 KCNQ3O43525 872 aa18.54■□□□□ 0.56
COL16A1-217ENST00000532877 SLC39A6Q13433 755 aa18.54■□□□□ 0.56
COL16A1-217ENST00000532877 ZNF790Q6PG37 636 aa18.54■□□□□ 0.56
COL16A1-217ENST00000532877 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
COL16A1-217ENST00000532877 CEP350Q5VT06 3117 aa18.53■□□□□ 0.56
COL16A1-217ENST00000532877 EXOSC9Q06265 439 aaKnown RBP18.52■□□□□ 0.56
COL16A1-217ENST00000532877 EIF4A1P60842 406 aaKnown RBP18.51■□□□□ 0.55
COL16A1-217ENST00000532877 KRT24Q2M2I5 525 aa18.51■□□□□ 0.55
COL16A1-217ENST00000532877 TTC5Q8N0Z6 440 aa18.51■□□□□ 0.55
COL16A1-217ENST00000532877 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
COL16A1-217ENST00000532877 ATG3Q9NT62 314 aa18.51■□□□□ 0.55
COL16A1-217ENST00000532877 ASAP1Q9ULH1 1129 aa18.51■□□□□ 0.55
COL16A1-217ENST00000532877 GOLGB1Q14789 3259 aaKnown RBP18.51■□□□□ 0.55
COL16A1-217ENST00000532877 COL24A1Q17RW2 1714 aa18.51■□□□□ 0.55
COL16A1-217ENST00000532877 SYT17Q9BSW7 474 aa18.5■□□□□ 0.55
COL16A1-217ENST00000532877 C5P01031 1676 aa18.5■□□□□ 0.55
COL16A1-217ENST00000532877 CENPBP07199 599 aaPredicted RBP18.49■□□□□ 0.55
COL16A1-217ENST00000532877 C1QTNF8P60827 252 aa18.49■□□□□ 0.55
COL16A1-217ENST00000532877 C8orf58Q8NAV2 365 aa18.49■□□□□ 0.55
COL16A1-217ENST00000532877 HEG1Q9ULI3 1381 aa18.49■□□□□ 0.55
COL16A1-217ENST00000532877 ZBTB7AO95365 584 aa18.48■□□□□ 0.55
COL16A1-217ENST00000532877 TSPYL6Q8N831 410 aa18.48■□□□□ 0.55
COL16A1-217ENST00000532877 ZNF496Q96IT1 587 aaPredicted RBP18.48■□□□□ 0.55
COL16A1-217ENST00000532877 LAMB4A4D0S4 1761 aa18.47■□□□□ 0.55
COL16A1-217ENST00000532877 PALLDQ8WX93 1383 aa18.47■□□□□ 0.55
COL16A1-217ENST00000532877 FMNL2Q96PY5 1086 aa18.47■□□□□ 0.55
COL16A1-217ENST00000532877 FHDC1Q9C0D6 1143 aaPredicted RBP18.47■□□□□ 0.55
COL16A1-217ENST00000532877 ELL2O00472 640 aaPredicted RBP18.46■□□□□ 0.55
COL16A1-217ENST00000532877 TWISTNBQ3B726 338 aaPredicted RBP18.46■□□□□ 0.55
COL16A1-217ENST00000532877 IFFO2Q5TF58 517 aa18.46■□□□□ 0.55
COL16A1-217ENST00000532877 CICQ96RK0 1608 aaPredicted RBP18.45■□□□□ 0.54
COL16A1-217ENST00000532877 PTCD1O75127 700 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms