RNA–Protein interactions for RNA: ENST00000532840.5

C11orf49-219, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-219ENST00000532840 SF3B2Q13435 895 aaKnown RBP11.71□□□□□ -0.53
C11orf49-219ENST00000532840 DCTN1Q14203 1278 aa11.71□□□□□ -0.53
C11orf49-219ENST00000532840 TXNRD1Q16881 649 aa11.71□□□□□ -0.53
C11orf49-219ENST00000532840 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.53
C11orf49-219ENST00000532840 GAS2L2Q8NHY3 880 aa11.71□□□□□ -0.53
C11orf49-219ENST00000532840 DLG5Q8TDM6 1919 aa11.7□□□□□ -0.54
C11orf49-219ENST00000532840 CEMIPQ8WUJ3 1361 aa11.7□□□□□ -0.54
C11orf49-219ENST00000532840 MAP3K5Q99683 1374 aa11.7□□□□□ -0.54
C11orf49-219ENST00000532840 LY75O60449 1722 aa11.7□□□□□ -0.54
C11orf49-219ENST00000532840 HSP90AB1P08238 724 aaKnown RBP11.7□□□□□ -0.54
C11orf49-219ENST00000532840 C1orf141Q5JVX7 400 aa11.7□□□□□ -0.54
C11orf49-219ENST00000532840 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
C11orf49-219ENST00000532840 MRS2Q9HD23 443 aa11.7□□□□□ -0.54
C11orf49-219ENST00000532840 MRC1P22897 1456 aa11.7□□□□□ -0.54
C11orf49-219ENST00000532840 RGPD3A6NKT7 1758 aaPredicted RBP11.69□□□□□ -0.54
C11orf49-219ENST00000532840 RGPD4Q7Z3J3 1758 aa11.69□□□□□ -0.54
C11orf49-219ENST00000532840 NUP188Q5SRE5 1749 aa11.69□□□□□ -0.54
C11orf49-219ENST00000532840 GNAT3A8MTJ3 354 aa11.69□□□□□ -0.54
C11orf49-219ENST00000532840 NFE2L2Q16236 605 aa11.69□□□□□ -0.54
C11orf49-219ENST00000532840 MCM10Q7L590 875 aa11.69□□□□□ -0.54
C11orf49-219ENST00000532840 SLC52A2Q9HAB3 445 aa11.69□□□□□ -0.54
C11orf49-219ENST00000532840 TMPOP42166 694 aaKnown RBP11.68□□□□□ -0.54
C11orf49-219ENST00000532840 DIEXFQ68CQ4 756 aaKnown RBP11.68□□□□□ -0.54
C11orf49-219ENST00000532840 MIER1Q8N108 512 aa11.68□□□□□ -0.54
C11orf49-219ENST00000532840 THUMPD2Q9BTF0 503 aaKnown RBP11.68□□□□□ -0.54
C11orf49-219ENST00000532840 TMOD3Q9NYL9 352 aa11.68□□□□□ -0.54
C11orf49-219ENST00000532840 TRIM35Q9UPQ4 493 aa11.68□□□□□ -0.54
C11orf49-219ENST00000532840 RRP7AQ9Y3A4 280 aaKnown RBP11.68□□□□□ -0.54
C11orf49-219ENST00000532840 SIPA1L3O60292 1781 aaPredicted RBP11.68□□□□□ -0.54
C11orf49-219ENST00000532840 PALLDQ8WX93 1383 aa11.67□□□□□ -0.54
C11orf49-219ENST00000532840 SENP3-EIF4A1A0A087X0R7 540 aa11.67□□□□□ -0.54
C11orf49-219ENST00000532840 KCNQ3O43525 872 aa11.67□□□□□ -0.54
C11orf49-219ENST00000532840 CABP4P57796 275 aa11.67□□□□□ -0.54
C11orf49-219ENST00000532840 SLC39A6Q13433 755 aa11.67□□□□□ -0.54
C11orf49-219ENST00000532840 ITPK1Q13572 414 aa11.67□□□□□ -0.54
C11orf49-219ENST00000532840 RUNDC1Q96C34 613 aa11.67□□□□□ -0.54
C11orf49-219ENST00000532840 PAPPAQ13219 1627 aa11.67□□□□□ -0.54
C11orf49-219ENST00000532840 APAF1O14727 1248 aa11.66□□□□□ -0.54
C11orf49-219ENST00000532840 WDR43Q15061 677 aaKnown RBP eCLIP11.66□□□□□ -0.54
C11orf49-219ENST00000532840 ZNF827Q17R98 1081 aa11.66□□□□□ -0.54
C11orf49-219ENST00000532840 AMIGO3Q86WK7 504 aa11.66□□□□□ -0.54
C11orf49-219ENST00000532840 PDGFDQ9GZP0 370 aaPredicted RBP11.66□□□□□ -0.54
C11orf49-219ENST00000532840 SRCAPQ6ZRS2 3230 aa11.65□□□□□ -0.54
C11orf49-219ENST00000532840 LOC102724428A0A0B4J2F2 783 aa11.65□□□□□ -0.54
C11orf49-219ENST00000532840 HTATSF1O43719 755 aaKnown RBP11.65□□□□□ -0.54
C11orf49-219ENST00000532840 SIK1P57059 783 aa11.65□□□□□ -0.54
C11orf49-219ENST00000532840 RIPK4P57078 832 aa11.65□□□□□ -0.54
C11orf49-219ENST00000532840 AKT1S1Q96B36 256 aa11.65□□□□□ -0.54
C11orf49-219ENST00000532840 SPINK5Q9NQ38 1064 aaPredicted RBP11.65□□□□□ -0.54
C11orf49-219ENST00000532840 SMIM5Q71RC9 77 aa11.64□□□□□ -0.55
C11orf49-219ENST00000532840 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
C11orf49-219ENST00000532840 TAF1LQ8IZX4 1826 aa11.64□□□□□ -0.55
C11orf49-219ENST00000532840 KCPQ6ZWJ8 1503 aa11.64□□□□□ -0.55
C11orf49-219ENST00000532840 MYH14Q7Z406 1995 aaKnown RBP11.63□□□□□ -0.55
C11orf49-219ENST00000532840 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
C11orf49-219ENST00000532840 CAPN15O75808 1086 aa11.63□□□□□ -0.55
C11orf49-219ENST00000532840 NEUROD2Q15784 382 aa11.63□□□□□ -0.55
C11orf49-219ENST00000532840 SLC27A3Q5K4L6 730 aa11.63□□□□□ -0.55
C11orf49-219ENST00000532840 LINC00116Q8NCU8 138 aa11.63□□□□□ -0.55
C11orf49-219ENST00000532840 SMARCC1Q92922 1105 aaPredicted RBP11.63□□□□□ -0.55
C11orf49-219ENST00000532840 PNNQ9H307 717 aaKnown RBP11.63□□□□□ -0.55
C11orf49-219ENST00000532840 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
C11orf49-219ENST00000532840 CCNL1Q9UK58 526 aaPredicted RBP11.63□□□□□ -0.55
C11orf49-219ENST00000532840 MAPK8IP3Q9UPT6 1336 aa11.62□□□□□ -0.55
C11orf49-219ENST00000532840 CCER2I3L3R5 266 aa11.62□□□□□ -0.55
C11orf49-219ENST00000532840 PTCD1O75127 700 aaKnown RBP11.62□□□□□ -0.55
C11orf49-219ENST00000532840 R3HDM1Q15032 1099 aaKnown RBP11.62□□□□□ -0.55
C11orf49-219ENST00000532840 ZNF496Q96IT1 587 aaPredicted RBP11.62□□□□□ -0.55
C11orf49-219ENST00000532840 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
C11orf49-219ENST00000532840 PRAMEF22A3QJZ6 481 aa11.61□□□□□ -0.55
C11orf49-219ENST00000532840 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
C11orf49-219ENST00000532840 SLC15A2Q16348 729 aa11.61□□□□□ -0.55
C11orf49-219ENST00000532840 ZNF790Q6PG37 636 aa11.61□□□□□ -0.55
C11orf49-219ENST00000532840 FAM9BQ8IZU0 186 aa11.61□□□□□ -0.55
C11orf49-219ENST00000532840 TUBGCP6Q96RT7 1819 aa11.6□□□□□ -0.55
C11orf49-219ENST00000532840 ZNF831Q5JPB2 1677 aa11.6□□□□□ -0.55
C11orf49-219ENST00000532840 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
C11orf49-219ENST00000532840 TEFQ10587 303 aa11.6□□□□□ -0.55
C11orf49-219ENST00000532840 TAF7Q15545 349 aaPredicted RBP11.6□□□□□ -0.55
C11orf49-219ENST00000532840 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
C11orf49-219ENST00000532840 RBM42Q9BTD8 480 aaKnown RBP11.6□□□□□ -0.55
C11orf49-219ENST00000532840 TJP1Q07157 1748 aa11.6□□□□□ -0.55
C11orf49-219ENST00000532840 C5P01031 1676 aa11.59□□□□□ -0.55
C11orf49-219ENST00000532840 HEG1Q9ULI3 1381 aa11.59□□□□□ -0.55
C11orf49-219ENST00000532840 BTBD11A6QL63 1104 aa11.59□□□□□ -0.55
C11orf49-219ENST00000532840 ZNF853P0CG23 659 aa11.59□□□□□ -0.55
C11orf49-219ENST00000532840 DNAJC10Q8IXB1 793 aa11.59□□□□□ -0.55
C11orf49-219ENST00000532840 PNPLA7Q6ZV29 1317 aa11.59□□□□□ -0.55
C11orf49-219ENST00000532840 C4BP0C0L5 1744 aa11.58□□□□□ -0.56
C11orf49-219ENST00000532840 COL5A3P25940 1745 aaPredicted RBP11.58□□□□□ -0.56
C11orf49-219ENST00000532840 CICQ96RK0 1608 aaPredicted RBP11.58□□□□□ -0.56
C11orf49-219ENST00000532840 NEFMP07197 916 aa11.58□□□□□ -0.56
C11orf49-219ENST00000532840 INTS5Q6P9B9 1019 aaKnown RBP11.58□□□□□ -0.56
C11orf49-219ENST00000532840 KDM3BQ7LBC6 1761 aa11.58□□□□□ -0.56
C11orf49-219ENST00000532840 CASZ1Q86V15 1759 aa11.57□□□□□ -0.56
C11orf49-219ENST00000532840 CHL1O00533 1208 aa11.57□□□□□ -0.56
C11orf49-219ENST00000532840 CYP19A1P11511 503 aaPredicted RBP11.57□□□□□ -0.56
C11orf49-219ENST00000532840 EIF4A1P60842 406 aaKnown RBP11.57□□□□□ -0.56
C11orf49-219ENST00000532840 COL23A1Q86Y22 540 aaPredicted RBP11.57□□□□□ -0.56
C11orf49-219ENST00000532840 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms