RNA–Protein interactions for RNA: ENST00000532674.2

RPUSD4-206, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-206ENST00000532674 HSPA6P17066 643 aa25.84■■□□□ 1.73
RPUSD4-206ENST00000532674 TRIM26Q12899 539 aaPredicted RBP25.84■■□□□ 1.73
RPUSD4-206ENST00000532674 TRAPPC3LQ5T215 181 aa25.84■■□□□ 1.73
RPUSD4-206ENST00000532674 RTCBQ9Y3I0 505 aaKnown RBP25.84■■□□□ 1.73
RPUSD4-206ENST00000532674 CEP350Q5VT06 3117 aa25.83■■□□□ 1.73
RPUSD4-206ENST00000532674 IFFO2Q5TF58 517 aa25.83■■□□□ 1.73
RPUSD4-206ENST00000532674 POLR3GLQ9BT43 218 aa25.83■■□□□ 1.73
RPUSD4-206ENST00000532674 TIMELESSQ9UNS1 1208 aa25.83■■□□□ 1.73
RPUSD4-206ENST00000532674 ERVV-2B6SEH9 535 aa25.82■■□□□ 1.72
RPUSD4-206ENST00000532674 NLGN1Q8N2Q7 840 aa25.82■■□□□ 1.72
RPUSD4-206ENST00000532674 RBM42Q9BTD8 480 aaKnown RBP25.82■■□□□ 1.72
RPUSD4-206ENST00000532674 PLEKHG2Q9H7P9 1386 aa25.81■■□□□ 1.72
RPUSD4-206ENST00000532674 HSP90AB1P08238 724 aaKnown RBP25.8■■□□□ 1.72
RPUSD4-206ENST00000532674 TGFB2P61812 414 aa25.8■■□□□ 1.72
RPUSD4-206ENST00000532674 DCAF5Q96JK2 942 aa25.8■■□□□ 1.72
RPUSD4-206ENST00000532674 SLC4A9Q96Q91 983 aa25.8■■□□□ 1.72
RPUSD4-206ENST00000532674 RC3H1Q5TC82 1133 aaKnown RBP25.79■■□□□ 1.72
RPUSD4-206ENST00000532674 ARHGEF1Q92888 912 aaKnown RBP25.79■■□□□ 1.72
RPUSD4-206ENST00000532674 KDRP35968 1356 aa25.79■■□□□ 1.72
RPUSD4-206ENST00000532674 PLEKHO1Q53GL0 409 aaPredicted RBP25.78■■□□□ 1.72
RPUSD4-206ENST00000532674 A0A0G2JLW4 131 aa25.77■■□□□ 1.72
RPUSD4-206ENST00000532674 ADRA2BP18089 450 aa25.77■■□□□ 1.72
RPUSD4-206ENST00000532674 KIF3CO14782 793 aa25.76■■□□□ 1.71
RPUSD4-206ENST00000532674 BCS1LQ9Y276 419 aa25.76■■□□□ 1.71
RPUSD4-206ENST00000532674 PXDNLA1KZ92 1463 aa25.76■■□□□ 1.71
RPUSD4-206ENST00000532674 RPS6KA4O75676 772 aa25.75■■□□□ 1.71
RPUSD4-206ENST00000532674 RFC4P35249 363 aa25.75■■□□□ 1.71
RPUSD4-206ENST00000532674 CABP4P57796 275 aa25.75■■□□□ 1.71
RPUSD4-206ENST00000532674 CNTNAP4Q9C0A0 1308 aa25.74■■□□□ 1.71
RPUSD4-206ENST00000532674 GYS1P13807 737 aa25.74■■□□□ 1.71
RPUSD4-206ENST00000532674 AMOTQ4VCS5 1084 aa25.74■■□□□ 1.71
RPUSD4-206ENST00000532674 ZNF530Q6P9A1 599 aaPredicted RBP25.74■■□□□ 1.71
RPUSD4-206ENST00000532674 CCDC87Q9NVE4 849 aa25.74■■□□□ 1.71
RPUSD4-206ENST00000532674 PARP3Q9Y6F1 533 aa25.73■■□□□ 1.71
RPUSD4-206ENST00000532674 CICQ96RK0 1608 aaPredicted RBP25.73■■□□□ 1.71
RPUSD4-206ENST00000532674 ARHGAP27Q6ZUM4 889 aa25.72■■□□□ 1.71
RPUSD4-206ENST00000532674 DPEP1P16444 411 aa25.71■■□□□ 1.71
RPUSD4-206ENST00000532674 MTHFSP49914 203 aa25.71■■□□□ 1.71
RPUSD4-206ENST00000532674 PANK3Q9H999 370 aa25.71■■□□□ 1.71
RPUSD4-206ENST00000532674 C10orf71Q711Q0 1435 aa25.71■■□□□ 1.71
RPUSD4-206ENST00000532674 ZNF831Q5JPB2 1677 aa25.71■■□□□ 1.71
RPUSD4-206ENST00000532674 KIF13BQ9NQT8 1826 aa25.7■■□□□ 1.71
RPUSD4-206ENST00000532674 PTCD1O75127 700 aaKnown RBP25.7■■□□□ 1.7
RPUSD4-206ENST00000532674 FCHSD2O94868 740 aa25.69■■□□□ 1.7
RPUSD4-206ENST00000532674 KDM6AO15550 1401 aaPredicted RBP25.69■■□□□ 1.7
RPUSD4-206ENST00000532674 N4BP2Q86UW6 1770 aaPredicted RBP25.69■■□□□ 1.7
RPUSD4-206ENST00000532674 C1orf141Q5JVX7 400 aa25.68■■□□□ 1.7
RPUSD4-206ENST00000532674 NFATC2IPQ8NCF5 419 aa25.67■■□□□ 1.7
RPUSD4-206ENST00000532674 KIAA1551Q9HCM1 1747 aa25.67■■□□□ 1.7
RPUSD4-206ENST00000532674 TOMM70O94826 608 aa25.66■■□□□ 1.7
RPUSD4-206ENST00000532674 CRKLP46109 303 aaKnown RBP25.66■■□□□ 1.7
RPUSD4-206ENST00000532674 EIF4G2P78344 907 aaKnown RBP eCLIP25.66■■□□□ 1.7
RPUSD4-206ENST00000532674 MORC1Q86VD1 984 aa25.66■■□□□ 1.7
RPUSD4-206ENST00000532674 AEBP1Q8IUX7 1158 aa25.66■■□□□ 1.7
RPUSD4-206ENST00000532674 C4AP0C0L4 1744 aa25.65■■□□□ 1.7
RPUSD4-206ENST00000532674 COL5A3P25940 1745 aaPredicted RBP25.65■■□□□ 1.7
RPUSD4-206ENST00000532674 CLSPNQ9HAW4 1339 aa25.64■■□□□ 1.7
RPUSD4-206ENST00000532674 KCNA3P22001 575 aa25.64■■□□□ 1.7
RPUSD4-206ENST00000532674 APLP1P51693 650 aa25.64■■□□□ 1.7
RPUSD4-206ENST00000532674 HSPA5P11021 654 aaKnown RBP25.63■■□□□ 1.69
RPUSD4-206ENST00000532674 SULT6B1Q6IMI4 303 aa25.63■■□□□ 1.69
RPUSD4-206ENST00000532674 PIM2Q9P1W9 311 aa25.63■■□□□ 1.69
RPUSD4-206ENST00000532674 SRP68Q9UHB9 627 aaKnown RBP25.63■■□□□ 1.69
RPUSD4-206ENST00000532674 FKBP8Q14318 412 aa25.61■■□□□ 1.69
RPUSD4-206ENST00000532674 PCGF6Q9BYE7 350 aa25.61■■□□□ 1.69
RPUSD4-206ENST00000532674 NMRK2Q9NPI5 230 aa25.61■■□□□ 1.69
RPUSD4-206ENST00000532674 MYH14Q7Z406 1995 aaKnown RBP25.61■■□□□ 1.69
RPUSD4-206ENST00000532674 C9orf131Q5VYM1 1079 aa25.6■■□□□ 1.69
RPUSD4-206ENST00000532674 USP42Q9H9J4 1324 aaKnown RBP25.6■■□□□ 1.69
RPUSD4-206ENST00000532674 DALRD3Q5D0E6 543 aaKnown RBP25.58■■□□□ 1.69
RPUSD4-206ENST00000532674 IL13P35225 146 aa25.57■■□□□ 1.68
RPUSD4-206ENST00000532674 DDR1Q08345 913 aa25.57■■□□□ 1.68
RPUSD4-206ENST00000532674 INTS5Q6P9B9 1019 aaKnown RBP25.57■■□□□ 1.68
RPUSD4-206ENST00000532674 DNAJC5GQ8N7S2 189 aa25.56■■□□□ 1.68
RPUSD4-206ENST00000532674 KNSTRNQ9Y448 316 aa25.56■■□□□ 1.68
RPUSD4-206ENST00000532674 BRCA1P38398 1863 aaKnown RBP25.54■■□□□ 1.68
RPUSD4-206ENST00000532674 TM4SF1P30408 202 aa25.54■■□□□ 1.68
RPUSD4-206ENST00000532674 AKAP4Q5JQC9 854 aa25.54■■□□□ 1.68
RPUSD4-206ENST00000532674 POLRMTO00411 1230 aaKnown RBP25.53■■□□□ 1.68
RPUSD4-206ENST00000532674 ZPR1O75312 459 aa25.53■■□□□ 1.68
RPUSD4-206ENST00000532674 CHRNA5P30532 468 aa25.53■■□□□ 1.68
RPUSD4-206ENST00000532674 DNAJC10Q8IXB1 793 aa25.53■■□□□ 1.68
RPUSD4-206ENST00000532674 C16orf71Q8IYS4 520 aaPredicted RBP25.53■■□□□ 1.68
RPUSD4-206ENST00000532674 RBM46Q8TBY0 533 aaKnown RBP25.53■■□□□ 1.68
RPUSD4-206ENST00000532674 SLC52A2Q9HAB3 445 aa25.52■■□□□ 1.68
RPUSD4-206ENST00000532674 LGR6Q9HBX8 967 aa25.52■■□□□ 1.68
RPUSD4-206ENST00000532674 RNF181Q9P0P0 153 aa25.52■■□□□ 1.68
RPUSD4-206ENST00000532674 USPL1Q5W0Q7 1092 aa25.51■■□□□ 1.67
RPUSD4-206ENST00000532674 KDM2BQ8NHM5 1336 aa25.51■■□□□ 1.67
RPUSD4-206ENST00000532674 TJP1Q07157 1748 aa25.51■■□□□ 1.67
RPUSD4-206ENST00000532674 ARFGEF1Q9Y6D6 1849 aa25.51■■□□□ 1.67
RPUSD4-206ENST00000532674 SOS1Q07889 1333 aaPredicted RBP25.48■■□□□ 1.67
RPUSD4-206ENST00000532674 CYP19A1P11511 503 aaPredicted RBP25.48■■□□□ 1.67
RPUSD4-206ENST00000532674 SCN11AQ9UI33 1791 aa25.47■■□□□ 1.67
RPUSD4-206ENST00000532674 RNMTO43148 476 aaKnown RBP25.47■■□□□ 1.67
RPUSD4-206ENST00000532674 FSTL1Q12841 308 aa25.47■■□□□ 1.67
RPUSD4-206ENST00000532674 SLC39A6Q13433 755 aa25.47■■□□□ 1.67
RPUSD4-206ENST00000532674 RRAGCQ9HB90 399 aa25.46■■□□□ 1.67
RPUSD4-206ENST00000532674 NARFQ9UHQ1 456 aa25.46■■□□□ 1.67
RPUSD4-206ENST00000532674 KCPQ6ZWJ8 1503 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms