RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 NPHP3Q7Z494 1330 aa12.4□□□□□ -0.42
CDC27-208ENST00000532575 HFM1A2PYH4 1435 aa12.4□□□□□ -0.42
CDC27-208ENST00000532575 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
CDC27-208ENST00000532575 SPIRE2Q8WWL2 714 aa12.4□□□□□ -0.42
CDC27-208ENST00000532575 DDRGK1Q96HY6 314 aa12.4□□□□□ -0.42
CDC27-208ENST00000532575 PCDHB3Q9Y5E6 796 aa12.4□□□□□ -0.42
CDC27-208ENST00000532575 PLEKHG3A1L390 1219 aa12.39□□□□□ -0.43
CDC27-208ENST00000532575 ESCO1Q5FWF5 840 aa12.39□□□□□ -0.43
CDC27-208ENST00000532575 LAMC1P11047 1609 aa12.38□□□□□ -0.43
CDC27-208ENST00000532575 NALCNQ8IZF0 1738 aa12.38□□□□□ -0.43
CDC27-208ENST00000532575 PUS10Q3MIT2 529 aaKnown RBP12.38□□□□□ -0.43
CDC27-208ENST00000532575 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
CDC27-208ENST00000532575 LRPPRCP42704 1394 aaKnown RBP12.38□□□□□ -0.43
CDC27-208ENST00000532575 ATRNO75882 1429 aa12.37□□□□□ -0.43
CDC27-208ENST00000532575 PRAG1Q86YV5 1406 aa12.37□□□□□ -0.43
CDC27-208ENST00000532575 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
CDC27-208ENST00000532575 ATP6V1AP38606 617 aa12.37□□□□□ -0.43
CDC27-208ENST00000532575 USP46P62068 366 aa12.37□□□□□ -0.43
CDC27-208ENST00000532575 HOXA2O43364 376 aa12.36□□□□□ -0.43
CDC27-208ENST00000532575 BLOC1S3Q6QNY0 202 aa12.36□□□□□ -0.43
CDC27-208ENST00000532575 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
CDC27-208ENST00000532575 MTRQ99707 1265 aa12.36□□□□□ -0.43
CDC27-208ENST00000532575 SRCAPQ6ZRS2 3230 aa12.35□□□□□ -0.43
CDC27-208ENST00000532575 FOXO3O43524 673 aa12.35□□□□□ -0.43
CDC27-208ENST00000532575 COPS2P61201 443 aa12.35□□□□□ -0.43
CDC27-208ENST00000532575 TJAP1Q5JTD0 557 aa12.35□□□□□ -0.43
CDC27-208ENST00000532575 MORN1Q5T089 497 aa12.35□□□□□ -0.43
CDC27-208ENST00000532575 HLA-CQ95604 372 aa12.35□□□□□ -0.43
CDC27-208ENST00000532575 GJD4Q96KN9 370 aaPredicted RBP12.35□□□□□ -0.43
CDC27-208ENST00000532575 DIXDC1Q155Q3 683 aa12.34□□□□□ -0.43
CDC27-208ENST00000532575 GRIPAP1Q4V328 841 aa12.34□□□□□ -0.43
CDC27-208ENST00000532575 PPARGC1BQ86YN6 1023 aaKnown RBP12.34□□□□□ -0.43
CDC27-208ENST00000532575 KIF1BO60333 1816 aa12.34□□□□□ -0.43
CDC27-208ENST00000532575 MYOM2P54296 1465 aa12.34□□□□□ -0.43
CDC27-208ENST00000532575 MOXD2PA6NHM9 499 aa12.33□□□□□ -0.44
CDC27-208ENST00000532575 NAIPQ13075 1403 aa12.33□□□□□ -0.44
CDC27-208ENST00000532575 BCL9LQ86UU0 1499 aa12.33□□□□□ -0.44
CDC27-208ENST00000532575 NDUFV2P19404 249 aa12.32□□□□□ -0.44
CDC27-208ENST00000532575 GUCA2AQ02747 115 aa12.32□□□□□ -0.44
CDC27-208ENST00000532575 MYSM1Q5VVJ2 828 aa12.32□□□□□ -0.44
CDC27-208ENST00000532575 UNC5CLQ8IV45 518 aa12.32□□□□□ -0.44
CDC27-208ENST00000532575 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
CDC27-208ENST00000532575 COL22A1Q8NFW1 1626 aaPredicted RBP12.32□□□□□ -0.44
CDC27-208ENST00000532575 ITGBL1O95965 494 aaPredicted RBP12.31□□□□□ -0.44
CDC27-208ENST00000532575 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
CDC27-208ENST00000532575 SLC27A5Q9Y2P5 690 aa12.31□□□□□ -0.44
CDC27-208ENST00000532575 PXDNQ92626 1479 aa12.3□□□□□ -0.44
CDC27-208ENST00000532575 NR1I2O75469 434 aa12.3□□□□□ -0.44
CDC27-208ENST00000532575 SF3B2Q13435 895 aaKnown RBP12.3□□□□□ -0.44
CDC27-208ENST00000532575 ZNF516Q92618 1163 aa12.3□□□□□ -0.44
CDC27-208ENST00000532575 RSPH6AQ9H0K4 717 aa12.3□□□□□ -0.44
CDC27-208ENST00000532575 STK26Q9P289 416 aa12.3□□□□□ -0.44
CDC27-208ENST00000532575 CDC42BPGQ6DT37 1551 aa12.3□□□□□ -0.44
CDC27-208ENST00000532575 RRBP1Q9P2E9 1410 aaKnown RBP12.29□□□□□ -0.44
CDC27-208ENST00000532575 PSME1Q06323 249 aa12.29□□□□□ -0.44
CDC27-208ENST00000532575 WAPLQ7Z5K2 1190 aa12.29□□□□□ -0.44
CDC27-208ENST00000532575 SCUBE3Q8IX30 993 aa12.29□□□□□ -0.44
CDC27-208ENST00000532575 SPATA31A3Q5VYP0 1347 aa12.29□□□□□ -0.44
CDC27-208ENST00000532575 ABCC11Q96J66 1382 aa12.29□□□□□ -0.44
CDC27-208ENST00000532575 ANKRD30BQ9BXX2 1392 aa12.29□□□□□ -0.44
CDC27-208ENST00000532575 BLMP54132 1417 aaPredicted RBP12.28□□□□□ -0.44
CDC27-208ENST00000532575 RGL3Q3MIN7 710 aa12.28□□□□□ -0.44
CDC27-208ENST00000532575 RSBN1LQ6PCB5 846 aaPredicted RBP12.28□□□□□ -0.44
CDC27-208ENST00000532575 ADGRF5Q8IZF2 1346 aa12.28□□□□□ -0.44
CDC27-208ENST00000532575 SPTLC1O15269 473 aa12.27□□□□□ -0.45
CDC27-208ENST00000532575 ZPR1O75312 459 aa12.27□□□□□ -0.45
CDC27-208ENST00000532575 FDX1P10109 184 aa12.27□□□□□ -0.45
CDC27-208ENST00000532575 KCNC4Q03721 635 aa12.27□□□□□ -0.45
CDC27-208ENST00000532575 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.45
CDC27-208ENST00000532575 KRT28Q7Z3Y7 464 aa12.27□□□□□ -0.45
CDC27-208ENST00000532575 RIC3Q7Z5B4 369 aa12.27□□□□□ -0.45
CDC27-208ENST00000532575 SIRT1Q96EB6 747 aa12.27□□□□□ -0.45
CDC27-208ENST00000532575 PCDHGC3Q9UN70 934 aa12.27□□□□□ -0.45
CDC27-208ENST00000532575 CCDC144AA2RUR9 1427 aa12.27□□□□□ -0.45
CDC27-208ENST00000532575 TECPR2O15040 1411 aa12.27□□□□□ -0.45
CDC27-208ENST00000532575 POLR3EQ9NVU0 708 aa12.26□□□□□ -0.45
CDC27-208ENST00000532575 LIMD1Q9UGP4 676 aa12.26□□□□□ -0.45
CDC27-208ENST00000532575 RALGAPBQ86X10 1494 aa12.26□□□□□ -0.45
CDC27-208ENST00000532575 SLIT2O94813 1529 aa12.26□□□□□ -0.45
CDC27-208ENST00000532575 TLL1O43897 1013 aa12.25□□□□□ -0.45
CDC27-208ENST00000532575 GJA5P36382 358 aa12.25□□□□□ -0.45
CDC27-208ENST00000532575 CLK2P49760 499 aaKnown RBP12.25□□□□□ -0.45
CDC27-208ENST00000532575 VPS72Q15906 364 aa12.25□□□□□ -0.45
CDC27-208ENST00000532575 TMEM132EQ6IEE7 984 aa12.25□□□□□ -0.45
CDC27-208ENST00000532575 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
CDC27-208ENST00000532575 EP400Q96L91 3159 aa12.24□□□□□ -0.45
CDC27-208ENST00000532575 PPLO60437 1756 aa12.24□□□□□ -0.45
CDC27-208ENST00000532575 SKIV2LQ15477 1246 aaKnown RBP12.24□□□□□ -0.45
CDC27-208ENST00000532575 THAP11Q96EK4 314 aa12.24□□□□□ -0.45
CDC27-208ENST00000532575 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
CDC27-208ENST00000532575 RNF19BQ6ZMZ0 732 aa12.23□□□□□ -0.45
CDC27-208ENST00000532575 PLA2G2EQ9NZK7 142 aa12.23□□□□□ -0.45
CDC27-208ENST00000532575 PCDHB15Q9Y5E8 787 aa12.23□□□□□ -0.45
CDC27-208ENST00000532575 PLEKHH1Q9ULM0 1364 aa12.22□□□□□ -0.45
CDC27-208ENST00000532575 Q3C1V9 767 aa12.22□□□□□ -0.45
CDC27-208ENST00000532575 BRICD5Q6PL45 260 aa12.22□□□□□ -0.45
CDC27-208ENST00000532575 KRT27Q7Z3Y8 459 aa12.22□□□□□ -0.45
CDC27-208ENST00000532575 DEFB132Q7Z7B7 95 aa12.22□□□□□ -0.45
CDC27-208ENST00000532575 NKX2-3Q8TAU0 364 aa12.22□□□□□ -0.45
CDC27-208ENST00000532575 SALL2Q9Y467 1007 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms