RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 ADAMTS8Q9UP79 889 aa10.71□□□□□ -0.69
TRIM49-202ENST00000532501 SHANK3Q9BYB0 1731 aa10.71□□□□□ -0.7
TRIM49-202ENST00000532501 A0A0G2JS52 829 aa10.7□□□□□ -0.7
TRIM49-202ENST00000532501 CYP27B1O15528 508 aa10.7□□□□□ -0.7
TRIM49-202ENST00000532501 MYT1Q01538 1121 aa10.7□□□□□ -0.7
TRIM49-202ENST00000532501 CCDC146Q8IYE0 955 aa10.7□□□□□ -0.7
TRIM49-202ENST00000532501 PLEKHF1Q96S99 279 aa10.7□□□□□ -0.7
TRIM49-202ENST00000532501 THRAP3Q9Y2W1 955 aaKnown RBP10.7□□□□□ -0.7
TRIM49-202ENST00000532501 PARP4Q9UKK3 1724 aaKnown RBP10.69□□□□□ -0.7
TRIM49-202ENST00000532501 PTF1AQ7RTS3 328 aa10.69□□□□□ -0.7
TRIM49-202ENST00000532501 TATP17735 454 aaPredicted RBP10.68□□□□□ -0.7
TRIM49-202ENST00000532501 RAPGEF4Q8WZA2 1011 aa10.68□□□□□ -0.7
TRIM49-202ENST00000532501 BRWD3Q6RI45 1802 aa10.68□□□□□ -0.7
TRIM49-202ENST00000532501 DDB1Q16531 1140 aa10.67□□□□□ -0.7
TRIM49-202ENST00000532501 MTHFSDQ2M296 383 aaKnown RBP10.67□□□□□ -0.7
TRIM49-202ENST00000532501 PKD1L3Q7Z443 1732 aa10.67□□□□□ -0.7
TRIM49-202ENST00000532501 KDM6AO15550 1401 aaPredicted RBP10.67□□□□□ -0.7
TRIM49-202ENST00000532501 CCER2I3L3R5 266 aa10.67□□□□□ -0.7
TRIM49-202ENST00000532501 ZCRB1Q8TBF4 217 aaKnown RBP10.67□□□□□ -0.7
TRIM49-202ENST00000532501 DDX54Q8TDD1 881 aaKnown RBP10.67□□□□□ -0.7
TRIM49-202ENST00000532501 TMEM121BQ9BXQ6 578 aaPredicted RBP10.67□□□□□ -0.7
TRIM49-202ENST00000532501 NUDCQ9Y266 331 aa10.67□□□□□ -0.7
TRIM49-202ENST00000532501 ZNF530Q6P9A1 599 aaPredicted RBP10.66□□□□□ -0.7
TRIM49-202ENST00000532501 KRT27Q7Z3Y8 459 aa10.66□□□□□ -0.7
TRIM49-202ENST00000532501 FAM9BQ8IZU0 186 aa10.66□□□□□ -0.7
TRIM49-202ENST00000532501 RRP7AQ9Y3A4 280 aaKnown RBP10.66□□□□□ -0.7
TRIM49-202ENST00000532501 EXOC5O00471 708 aa10.65□□□□□ -0.7
TRIM49-202ENST00000532501 FCHSD2O94868 740 aa10.65□□□□□ -0.7
TRIM49-202ENST00000532501 PHKG2P15735 406 aa10.65□□□□□ -0.7
TRIM49-202ENST00000532501 WDR43Q15061 677 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRIM49-202ENST00000532501 TOGARAM1Q9Y4F4 1720 aa10.65□□□□□ -0.7
TRIM49-202ENST00000532501 TTLL13PA6NNM8 815 aa10.64□□□□□ -0.71
TRIM49-202ENST00000532501 KCNQ2O43526 872 aa10.64□□□□□ -0.71
TRIM49-202ENST00000532501 DCTN1Q14203 1278 aa10.64□□□□□ -0.71
TRIM49-202ENST00000532501 THUMPD2Q9BTF0 503 aaKnown RBP10.64□□□□□ -0.71
TRIM49-202ENST00000532501 CDCA7Q9BWT1 371 aaPredicted RBP10.64□□□□□ -0.71
TRIM49-202ENST00000532501 MAP3K13O43283 966 aa10.63□□□□□ -0.71
TRIM49-202ENST00000532501 UPF1Q92900 1129 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRIM49-202ENST00000532501 ACSBG1Q96GR2 724 aa10.63□□□□□ -0.71
TRIM49-202ENST00000532501 LGR6Q9HBX8 967 aa10.63□□□□□ -0.71
TRIM49-202ENST00000532501 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRIM49-202ENST00000532501 PCDH11XQ9BZA7 1347 aa10.62□□□□□ -0.71
TRIM49-202ENST00000532501 PCDH11YQ9BZA8 1340 aa10.62□□□□□ -0.71
TRIM49-202ENST00000532501 APAF1O14727 1248 aa10.62□□□□□ -0.71
TRIM49-202ENST00000532501 PDE3BQ13370 1112 aa10.62□□□□□ -0.71
TRIM49-202ENST00000532501 PLEKHO1Q53GL0 409 aaPredicted RBP10.62□□□□□ -0.71
TRIM49-202ENST00000532501 MPRIPQ6WCQ1 1025 aa10.62□□□□□ -0.71
TRIM49-202ENST00000532501 MARVELD3Q96A59 401 aa10.62□□□□□ -0.71
TRIM49-202ENST00000532501 TMPOP42166 694 aaKnown RBP10.61□□□□□ -0.71
TRIM49-202ENST00000532501 NKX1-1Q15270 411 aaPredicted RBP10.61□□□□□ -0.71
TRIM49-202ENST00000532501 NFE2L2Q16236 605 aa10.61□□□□□ -0.71
TRIM49-202ENST00000532501 IER5LQ5T953 404 aa10.61□□□□□ -0.71
TRIM49-202ENST00000532501 IL17REQ8NFR9 667 aa10.61□□□□□ -0.71
TRIM49-202ENST00000532501 SPG7Q9UQ90 795 aa10.61□□□□□ -0.71
TRIM49-202ENST00000532501 MAP3K5Q99683 1374 aa10.6□□□□□ -0.71
TRIM49-202ENST00000532501 PLEKHG2Q9H7P9 1386 aa10.6□□□□□ -0.71
TRIM49-202ENST00000532501 AMOTQ4VCS5 1084 aa10.6□□□□□ -0.71
TRIM49-202ENST00000532501 MCM10Q7L590 875 aa10.6□□□□□ -0.71
TRIM49-202ENST00000532501 IFNL2Q8IZJ0 200 aa10.6□□□□□ -0.71
TRIM49-202ENST00000532501 RUNDC1Q96C34 613 aa10.6□□□□□ -0.71
TRIM49-202ENST00000532501 TRIM35Q9UPQ4 493 aa10.6□□□□□ -0.71
TRIM49-202ENST00000532501 BCL9O00512 1426 aa10.6□□□□□ -0.71
TRIM49-202ENST00000532501 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
TRIM49-202ENST00000532501 DOT1LQ8TEK3 1739 aa10.59□□□□□ -0.71
TRIM49-202ENST00000532501 RNMTO43148 476 aaKnown RBP10.59□□□□□ -0.71
TRIM49-202ENST00000532501 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
TRIM49-202ENST00000532501 NEUROD2Q15784 382 aa10.59□□□□□ -0.71
TRIM49-202ENST00000532501 AKAP4Q5JQC9 854 aa10.59□□□□□ -0.71
TRIM49-202ENST00000532501 CEMIPQ8WUJ3 1361 aa10.59□□□□□ -0.71
TRIM49-202ENST00000532501 TRIM37O94972 964 aa10.58□□□□□ -0.72
TRIM49-202ENST00000532501 GAS2L2Q8NHY3 880 aa10.58□□□□□ -0.72
TRIM49-202ENST00000532501 SALL2Q9Y467 1007 aaPredicted RBP10.58□□□□□ -0.72
TRIM49-202ENST00000532501 MAPK8IP3Q9UPT6 1336 aa10.58□□□□□ -0.72
TRIM49-202ENST00000532501 MRC1P22897 1456 aa10.58□□□□□ -0.72
TRIM49-202ENST00000532501 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
TRIM49-202ENST00000532501 PIGBQ92521 554 aa10.58□□□□□ -0.72
TRIM49-202ENST00000532501 GNAT3A8MTJ3 354 aa10.57□□□□□ -0.72
TRIM49-202ENST00000532501 KCNQ3O43525 872 aa10.57□□□□□ -0.72
TRIM49-202ENST00000532501 RIPK4P57078 832 aa10.57□□□□□ -0.72
TRIM49-202ENST00000532501 C1orf141Q5JVX7 400 aa10.57□□□□□ -0.72
TRIM49-202ENST00000532501 FAM196AQ6ZSG2 479 aa10.57□□□□□ -0.72
TRIM49-202ENST00000532501 DCAF5Q96JK2 942 aa10.57□□□□□ -0.72
TRIM49-202ENST00000532501 NHSQ6T4R5 1651 aa10.56□□□□□ -0.72
TRIM49-202ENST00000532501 SNPHO15079 494 aa10.56□□□□□ -0.72
TRIM49-202ENST00000532501 DEFB132Q7Z7B7 95 aa10.56□□□□□ -0.72
TRIM49-202ENST00000532501 SYTL4Q96C24 671 aaPredicted RBP10.56□□□□□ -0.72
TRIM49-202ENST00000532501 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
TRIM49-202ENST00000532501 KCNQ4P56696 695 aa10.55□□□□□ -0.72
TRIM49-202ENST00000532501 SLC39A6Q13433 755 aa10.55□□□□□ -0.72
TRIM49-202ENST00000532501 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
TRIM49-202ENST00000532501 MIS18AQ9NYP9 233 aa10.55□□□□□ -0.72
TRIM49-202ENST00000532501 ASAP1Q9ULH1 1129 aa10.55□□□□□ -0.72
TRIM49-202ENST00000532501 DLG5Q8TDM6 1919 aa10.55□□□□□ -0.72
TRIM49-202ENST00000532501 SBF2Q86WG5 1849 aa10.55□□□□□ -0.72
TRIM49-202ENST00000532501 NFATC2IPQ8NCF5 419 aa10.54□□□□□ -0.72
TRIM49-202ENST00000532501 SLC52A2Q9HAB3 445 aa10.54□□□□□ -0.72
TRIM49-202ENST00000532501 ZNF521Q96K83 1311 aa10.54□□□□□ -0.72
TRIM49-202ENST00000532501 SCN11AQ9UI33 1791 aa10.53□□□□□ -0.72
TRIM49-202ENST00000532501 PROM2Q8N271 834 aa10.53□□□□□ -0.72
TRIM49-202ENST00000532501 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms