RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 ATP6V1AP38606 617 aa21.41■■□□□ 1.02
LDLRAD3-205ENST00000532490 C1orf141Q5JVX7 400 aa21.41■■□□□ 1.02
LDLRAD3-205ENST00000532490 SLC4A9Q96Q91 983 aa21.41■■□□□ 1.02
LDLRAD3-205ENST00000532490 MSH5O43196 834 aa21.4■■□□□ 1.02
LDLRAD3-205ENST00000532490 HMOX1P09601 288 aa21.4■■□□□ 1.02
LDLRAD3-205ENST00000532490 AK7Q96M32 723 aa21.4■■□□□ 1.02
LDLRAD3-205ENST00000532490 ZNF831Q5JPB2 1677 aa21.4■■□□□ 1.02
LDLRAD3-205ENST00000532490 DCAF8L1A6NGE4 600 aa21.39■■□□□ 1.01
LDLRAD3-205ENST00000532490 CABP4P57796 275 aa21.39■■□□□ 1.01
LDLRAD3-205ENST00000532490 SMIM5Q71RC9 77 aa21.39■■□□□ 1.01
LDLRAD3-205ENST00000532490 SCN11AQ9UI33 1791 aa21.38■■□□□ 1.01
LDLRAD3-205ENST00000532490 UTRNP46939 3433 aa21.38■■□□□ 1.01
LDLRAD3-205ENST00000532490 CNGB1Q14028 1251 aaPredicted RBP21.38■■□□□ 1.01
LDLRAD3-205ENST00000532490 AKAP4Q5JQC9 854 aa21.38■■□□□ 1.01
LDLRAD3-205ENST00000532490 NFATC2IPQ8NCF5 419 aa21.37■■□□□ 1.01
LDLRAD3-205ENST00000532490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.36■■□□□ 1.01
LDLRAD3-205ENST00000532490 SSFA2P28290 1259 aa21.36■■□□□ 1.01
LDLRAD3-205ENST00000532490 MSL1Q68DK7 614 aa21.36■■□□□ 1.01
LDLRAD3-205ENST00000532490 RBM42Q9BTD8 480 aaKnown RBP21.35■■□□□ 1.01
LDLRAD3-205ENST00000532490 PHF14O94880 888 aa21.34■■□□□ 1.01
LDLRAD3-205ENST00000532490 MTHFSDQ2M296 383 aaKnown RBP21.34■■□□□ 1.01
LDLRAD3-205ENST00000532490 LGR6Q9HBX8 967 aa21.34■■□□□ 1.01
LDLRAD3-205ENST00000532490 COL5A3P25940 1745 aaPredicted RBP21.34■■□□□ 1.01
LDLRAD3-205ENST00000532490 GNPATO15228 680 aa21.33■■□□□ 1.01
LDLRAD3-205ENST00000532490 ADAMTS7Q9UKP4 1686 aa21.33■■□□□ 1
LDLRAD3-205ENST00000532490 YY1P25490 414 aa21.32■■□□□ 1
LDLRAD3-205ENST00000532490 RC3H1Q5TC82 1133 aaKnown RBP21.32■■□□□ 1
LDLRAD3-205ENST00000532490 NLGN2Q8NFZ4 835 aa21.32■■□□□ 1
LDLRAD3-205ENST00000532490 VIRMAQ69YN4 1812 aaKnown RBP21.32■■□□□ 1
LDLRAD3-205ENST00000532490 RNMTO43148 476 aaKnown RBP21.31■■□□□ 1
LDLRAD3-205ENST00000532490 KLHL34Q8N239 644 aa21.31■■□□□ 1
LDLRAD3-205ENST00000532490 SLC52A2Q9HAB3 445 aa21.31■■□□□ 1
LDLRAD3-205ENST00000532490 MRC1P22897 1456 aa21.31■■□□□ 1
LDLRAD3-205ENST00000532490 MYH14Q7Z406 1995 aaKnown RBP21.3■■□□□ 1
LDLRAD3-205ENST00000532490 PPP2R1AP30153 589 aa21.3■■□□□ 1
LDLRAD3-205ENST00000532490 CNTNAP4Q9C0A0 1308 aa21.29■■□□□ 1
LDLRAD3-205ENST00000532490 U2SURPO15042 1029 aaKnown RBP21.29■■□□□ 1
LDLRAD3-205ENST00000532490 PTCD1O75127 700 aaKnown RBP21.29■■□□□ 1
LDLRAD3-205ENST00000532490 CICQ96RK0 1608 aaPredicted RBP21.29■■□□□ 1
LDLRAD3-205ENST00000532490 TJP1Q07157 1748 aa21.27■■□□□ 1
LDLRAD3-205ENST00000532490 GOLGB1Q14789 3259 aaKnown RBP21.27■■□□□ 1
LDLRAD3-205ENST00000532490 RTCBQ9Y3I0 505 aaKnown RBP21.27■■□□□ 1
LDLRAD3-205ENST00000532490 RPS6KA4O75676 772 aa21.26■□□□□ 0.99
LDLRAD3-205ENST00000532490 TRAPPC3LQ5T215 181 aa21.26■□□□□ 0.99
LDLRAD3-205ENST00000532490 CFAP53Q96M91 514 aa21.26■□□□□ 0.99
LDLRAD3-205ENST00000532490 CD2APQ9Y5K6 639 aa21.26■□□□□ 0.99
LDLRAD3-205ENST00000532490 ADRA2BP18089 450 aa21.25■□□□□ 0.99
LDLRAD3-205ENST00000532490 ARHGEF1Q92888 912 aaKnown RBP21.25■□□□□ 0.99
LDLRAD3-205ENST00000532490 SLC39A6Q13433 755 aa21.24■□□□□ 0.99
LDLRAD3-205ENST00000532490 GPR162Q16538 588 aa21.24■□□□□ 0.99
LDLRAD3-205ENST00000532490 RSPH6AQ9H0K4 717 aa21.24■□□□□ 0.99
LDLRAD3-205ENST00000532490 CHD4Q14839 1912 aa21.23■□□□□ 0.99
LDLRAD3-205ENST00000532490 CRKLP46109 303 aaKnown RBP21.23■□□□□ 0.99
LDLRAD3-205ENST00000532490 IL17REQ8NFR9 667 aa21.23■□□□□ 0.99
LDLRAD3-205ENST00000532490 GAS2L2Q8NHY3 880 aa21.23■□□□□ 0.99
LDLRAD3-205ENST00000532490 PHACTR3Q96KR7 559 aa21.23■□□□□ 0.99
LDLRAD3-205ENST00000532490 KCPQ6ZWJ8 1503 aa21.22■□□□□ 0.99
LDLRAD3-205ENST00000532490 GNAT3A8MTJ3 354 aa21.21■□□□□ 0.99
LDLRAD3-205ENST00000532490 PRKAR2BP31323 418 aa21.21■□□□□ 0.99
LDLRAD3-205ENST00000532490 INTS5Q6P9B9 1019 aaKnown RBP21.21■□□□□ 0.99
LDLRAD3-205ENST00000532490 C4AP0C0L4 1744 aa21.21■□□□□ 0.99
LDLRAD3-205ENST00000532490 GYS1P13807 737 aa21.2■□□□□ 0.98
LDLRAD3-205ENST00000532490 YBX3P16989 372 aaKnown RBP eCLIP21.2■□□□□ 0.98
LDLRAD3-205ENST00000532490 DNAJC10Q8IXB1 793 aa21.2■□□□□ 0.98
LDLRAD3-205ENST00000532490 NUDCQ9Y266 331 aa21.2■□□□□ 0.98
LDLRAD3-205ENST00000532490 UBR2Q8IWV8 1755 aa21.19■□□□□ 0.98
LDLRAD3-205ENST00000532490 MMP10P09238 476 aa21.19■□□□□ 0.98
LDLRAD3-205ENST00000532490 NLGN1Q8N2Q7 840 aa21.19■□□□□ 0.98
LDLRAD3-205ENST00000532490 SIPA1L3O60292 1781 aaPredicted RBP21.18■□□□□ 0.98
LDLRAD3-205ENST00000532490 CYP19A1P11511 503 aaPredicted RBP21.18■□□□□ 0.98
LDLRAD3-205ENST00000532490 RFC4P35249 363 aa21.18■□□□□ 0.98
LDLRAD3-205ENST00000532490 PELP1Q8IZL8 1130 aaKnown RBP21.18■□□□□ 0.98
LDLRAD3-205ENST00000532490 FCHSD2O94868 740 aa21.17■□□□□ 0.98
LDLRAD3-205ENST00000532490 U2AF1L5P0DN76 240 aaPredicted RBP21.17■□□□□ 0.98
LDLRAD3-205ENST00000532490 U2AF1Q01081 240 aaKnown RBP eCLIP21.17■□□□□ 0.98
LDLRAD3-205ENST00000532490 VSIG10Q8N0Z9 540 aa21.17■□□□□ 0.98
LDLRAD3-205ENST00000532490 CEMIPQ8WUJ3 1361 aa21.17■□□□□ 0.98
LDLRAD3-205ENST00000532490 CCDC87Q9NVE4 849 aa21.16■□□□□ 0.98
LDLRAD3-205ENST00000532490 KIF13BQ9NQT8 1826 aa21.15■□□□□ 0.98
LDLRAD3-205ENST00000532490 SOS1Q07889 1333 aaPredicted RBP21.14■□□□□ 0.97
LDLRAD3-205ENST00000532490 USP42Q9H9J4 1324 aaKnown RBP21.14■□□□□ 0.97
LDLRAD3-205ENST00000532490 GRIN3BO60391 1043 aa21.14■□□□□ 0.97
LDLRAD3-205ENST00000532490 TEFQ10587 303 aa21.14■□□□□ 0.97
LDLRAD3-205ENST00000532490 SRP68Q9UHB9 627 aaKnown RBP21.14■□□□□ 0.97
LDLRAD3-205ENST00000532490 ZNF790Q6PG37 636 aa21.13■□□□□ 0.97
LDLRAD3-205ENST00000532490 ZNF784Q8NCA9 323 aaPredicted RBP21.13■□□□□ 0.97
LDLRAD3-205ENST00000532490 ZNF496Q96IT1 587 aaPredicted RBP21.12■□□□□ 0.97
LDLRAD3-205ENST00000532490 KIAA1551Q9HCM1 1747 aa21.12■□□□□ 0.97
LDLRAD3-205ENST00000532490 FKBP8Q14318 412 aa21.11■□□□□ 0.97
LDLRAD3-205ENST00000532490 TTC5Q8N0Z6 440 aa21.11■□□□□ 0.97
LDLRAD3-205ENST00000532490 ZBTB1Q9Y2K1 713 aa21.11■□□□□ 0.97
LDLRAD3-205ENST00000532490 C10orf71Q711Q0 1435 aa21.11■□□□□ 0.97
LDLRAD3-205ENST00000532490 HEG1Q9ULI3 1381 aa21.1■□□□□ 0.97
LDLRAD3-205ENST00000532490 PXDNLA1KZ92 1463 aa21.09■□□□□ 0.97
LDLRAD3-205ENST00000532490 PARP3Q9Y6F1 533 aa21.09■□□□□ 0.97
LDLRAD3-205ENST00000532490 KCNQ3O43525 872 aa21.08■□□□□ 0.97
LDLRAD3-205ENST00000532490 TM4SF1P30408 202 aa21.08■□□□□ 0.97
LDLRAD3-205ENST00000532490 TGFB2P61812 414 aa21.08■□□□□ 0.97
LDLRAD3-205ENST00000532490 DDR1Q08345 913 aa21.08■□□□□ 0.97
LDLRAD3-205ENST00000532490 HTATSF1O43719 755 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms