RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 ATP6V1AP38606 617 aa22.42■■□□□ 1.18
CAVIN3-204ENST00000532354 CC2D1BQ5T0F9 858 aaKnown RBP22.42■■□□□ 1.18
CAVIN3-204ENST00000532354 SMIM5Q71RC9 77 aa22.42■■□□□ 1.18
CAVIN3-204ENST00000532354 KDM6AO15550 1401 aaPredicted RBP22.41■■□□□ 1.18
CAVIN3-204ENST00000532354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.39■■□□□ 1.17
CAVIN3-204ENST00000532354 PHF14O94880 888 aa22.39■■□□□ 1.17
CAVIN3-204ENST00000532354 C1orf141Q5JVX7 400 aa22.39■■□□□ 1.17
CAVIN3-204ENST00000532354 UTRNP46939 3433 aa22.39■■□□□ 1.17
CAVIN3-204ENST00000532354 SSFA2P28290 1259 aa22.38■■□□□ 1.17
CAVIN3-204ENST00000532354 CABP4P57796 275 aa22.38■■□□□ 1.17
CAVIN3-204ENST00000532354 NLGN2Q8NFZ4 835 aa22.38■■□□□ 1.17
CAVIN3-204ENST00000532354 SLC4A9Q96Q91 983 aa22.38■■□□□ 1.17
CAVIN3-204ENST00000532354 NPC1L1Q9UHC9 1359 aa22.38■■□□□ 1.17
CAVIN3-204ENST00000532354 UBR3Q6ZT12 1888 aa22.37■■□□□ 1.17
CAVIN3-204ENST00000532354 GPR162Q16538 588 aa22.36■■□□□ 1.17
CAVIN3-204ENST00000532354 RBM42Q9BTD8 480 aaKnown RBP22.36■■□□□ 1.17
CAVIN3-204ENST00000532354 GNPATO15228 680 aa22.35■■□□□ 1.17
CAVIN3-204ENST00000532354 NFATC2IPQ8NCF5 419 aa22.35■■□□□ 1.17
CAVIN3-204ENST00000532354 DIAPH1O60610 1272 aaKnown RBP22.34■■□□□ 1.17
CAVIN3-204ENST00000532354 HMOX1P09601 288 aa22.34■■□□□ 1.17
CAVIN3-204ENST00000532354 CNGB1Q14028 1251 aaPredicted RBP22.33■■□□□ 1.17
CAVIN3-204ENST00000532354 AKAP4Q5JQC9 854 aa22.33■■□□□ 1.17
CAVIN3-204ENST00000532354 RC3H1Q5TC82 1133 aaKnown RBP22.32■■□□□ 1.16
CAVIN3-204ENST00000532354 CD2APQ9Y5K6 639 aa22.32■■□□□ 1.16
CAVIN3-204ENST00000532354 ZNF831Q5JPB2 1677 aa22.31■■□□□ 1.16
CAVIN3-204ENST00000532354 PTCD1O75127 700 aaKnown RBP22.3■■□□□ 1.16
CAVIN3-204ENST00000532354 PELP1Q8IZL8 1130 aaKnown RBP22.3■■□□□ 1.16
CAVIN3-204ENST00000532354 LGR6Q9HBX8 967 aa22.3■■□□□ 1.16
CAVIN3-204ENST00000532354 RTCBQ9Y3I0 505 aaKnown RBP22.29■■□□□ 1.16
CAVIN3-204ENST00000532354 MTHFSDQ2M296 383 aaKnown RBP22.28■■□□□ 1.16
CAVIN3-204ENST00000532354 TRAPPC3LQ5T215 181 aa22.28■■□□□ 1.16
CAVIN3-204ENST00000532354 CNTNAP4Q9C0A0 1308 aa22.28■■□□□ 1.16
CAVIN3-204ENST00000532354 RNMTO43148 476 aaKnown RBP22.27■■□□□ 1.16
CAVIN3-204ENST00000532354 SLC52A2Q9HAB3 445 aa22.27■■□□□ 1.16
CAVIN3-204ENST00000532354 SCN11AQ9UI33 1791 aa22.27■■□□□ 1.16
CAVIN3-204ENST00000532354 COL3A1P02461 1466 aaPredicted RBP22.27■■□□□ 1.16
CAVIN3-204ENST00000532354 CHD4Q14839 1912 aa22.26■■□□□ 1.15
CAVIN3-204ENST00000532354 RPS6KA4O75676 772 aa22.26■■□□□ 1.15
CAVIN3-204ENST00000532354 YBX3P16989 372 aaKnown RBP eCLIP22.26■■□□□ 1.15
CAVIN3-204ENST00000532354 ZNF784Q8NCA9 323 aaPredicted RBP22.26■■□□□ 1.15
CAVIN3-204ENST00000532354 ARHGEF1Q92888 912 aaKnown RBP22.26■■□□□ 1.15
CAVIN3-204ENST00000532354 GOLGB1Q14789 3259 aaKnown RBP22.25■■□□□ 1.15
CAVIN3-204ENST00000532354 COL5A3P25940 1745 aaPredicted RBP22.25■■□□□ 1.15
CAVIN3-204ENST00000532354 U2SURPO15042 1029 aaKnown RBP22.24■■□□□ 1.15
CAVIN3-204ENST00000532354 ADRA2BP18089 450 aa22.24■■□□□ 1.15
CAVIN3-204ENST00000532354 GRIN3BO60391 1043 aa22.23■■□□□ 1.15
CAVIN3-204ENST00000532354 MMP10P09238 476 aa22.22■■□□□ 1.15
CAVIN3-204ENST00000532354 CRKLP46109 303 aaKnown RBP22.22■■□□□ 1.15
CAVIN3-204ENST00000532354 NLGN1Q8N2Q7 840 aa22.22■■□□□ 1.15
CAVIN3-204ENST00000532354 MYH14Q7Z406 1995 aaKnown RBP22.21■■□□□ 1.15
CAVIN3-204ENST00000532354 RFC4P35249 363 aa22.21■■□□□ 1.15
CAVIN3-204ENST00000532354 SLC39A6Q13433 755 aa22.21■■□□□ 1.15
CAVIN3-204ENST00000532354 MRC1P22897 1456 aa22.21■■□□□ 1.15
CAVIN3-204ENST00000532354 GYS1P13807 737 aa22.2■■□□□ 1.14
CAVIN3-204ENST00000532354 ADAMTS7Q9UKP4 1686 aa22.19■■□□□ 1.14
CAVIN3-204ENST00000532354 TJP1Q07157 1748 aa22.18■■□□□ 1.14
CAVIN3-204ENST00000532354 INTS5Q6P9B9 1019 aaKnown RBP22.18■■□□□ 1.14
CAVIN3-204ENST00000532354 DNAJC10Q8IXB1 793 aa22.18■■□□□ 1.14
CAVIN3-204ENST00000532354 CFAP53Q96M91 514 aa22.18■■□□□ 1.14
CAVIN3-204ENST00000532354 CICQ96RK0 1608 aaPredicted RBP22.17■■□□□ 1.14
CAVIN3-204ENST00000532354 PPP2R1AP30153 589 aa22.16■■□□□ 1.14
CAVIN3-204ENST00000532354 GAS2L2Q8NHY3 880 aa22.16■■□□□ 1.14
CAVIN3-204ENST00000532354 GNAT3A8MTJ3 354 aa22.15■■□□□ 1.14
CAVIN3-204ENST00000532354 IL17REQ8NFR9 667 aa22.15■■□□□ 1.14
CAVIN3-204ENST00000532354 CYP19A1P11511 503 aaPredicted RBP22.14■■□□□ 1.13
CAVIN3-204ENST00000532354 PHACTR3Q96KR7 559 aa22.14■■□□□ 1.13
CAVIN3-204ENST00000532354 CCDC87Q9NVE4 849 aa22.14■■□□□ 1.13
CAVIN3-204ENST00000532354 SRP68Q9UHB9 627 aaKnown RBP22.14■■□□□ 1.13
CAVIN3-204ENST00000532354 VIRMAQ69YN4 1812 aaKnown RBP22.14■■□□□ 1.13
CAVIN3-204ENST00000532354 KCPQ6ZWJ8 1503 aa22.14■■□□□ 1.13
CAVIN3-204ENST00000532354 USP42Q9H9J4 1324 aaKnown RBP22.13■■□□□ 1.13
CAVIN3-204ENST00000532354 RSPH6AQ9H0K4 717 aa22.13■■□□□ 1.13
CAVIN3-204ENST00000532354 WWC3Q9ULE0 1092 aa22.13■■□□□ 1.13
CAVIN3-204ENST00000532354 NUDCQ9Y266 331 aa22.13■■□□□ 1.13
CAVIN3-204ENST00000532354 C4AP0C0L4 1744 aa22.12■■□□□ 1.13
CAVIN3-204ENST00000532354 PRKAR2BP31323 418 aa22.12■■□□□ 1.13
CAVIN3-204ENST00000532354 VSIG10Q8N0Z9 540 aa22.12■■□□□ 1.13
CAVIN3-204ENST00000532354 TGFB2P61812 414 aa22.11■■□□□ 1.13
CAVIN3-204ENST00000532354 TEFQ10587 303 aa22.11■■□□□ 1.13
CAVIN3-204ENST00000532354 FKBP8Q14318 412 aa22.11■■□□□ 1.13
CAVIN3-204ENST00000532354 PARP3Q9Y6F1 533 aa22.11■■□□□ 1.13
CAVIN3-204ENST00000532354 SOS1Q07889 1333 aaPredicted RBP22.09■■□□□ 1.13
CAVIN3-204ENST00000532354 C10orf71Q711Q0 1435 aa22.09■■□□□ 1.13
CAVIN3-204ENST00000532354 KIF13BQ9NQT8 1826 aa22.09■■□□□ 1.13
CAVIN3-204ENST00000532354 U2AF1L5P0DN76 240 aaPredicted RBP22.09■■□□□ 1.13
CAVIN3-204ENST00000532354 U2AF1Q01081 240 aaKnown RBP eCLIP22.09■■□□□ 1.13
CAVIN3-204ENST00000532354 TTC5Q8N0Z6 440 aa22.09■■□□□ 1.13
CAVIN3-204ENST00000532354 PXDNLA1KZ92 1463 aa22.09■■□□□ 1.13
CAVIN3-204ENST00000532354 A0A0G2JLW4 131 aa22.08■■□□□ 1.13
CAVIN3-204ENST00000532354 ZNF790Q6PG37 636 aa22.08■■□□□ 1.13
CAVIN3-204ENST00000532354 ZBTB1Q9Y2K1 713 aa22.08■■□□□ 1.13
CAVIN3-204ENST00000532354 ZPR1O75312 459 aa22.07■■□□□ 1.12
CAVIN3-204ENST00000532354 FCHSD2O94868 740 aa22.07■■□□□ 1.12
CAVIN3-204ENST00000532354 TM4SF1P30408 202 aa22.07■■□□□ 1.12
CAVIN3-204ENST00000532354 C1QTNF8P60827 252 aa22.07■■□□□ 1.12
CAVIN3-204ENST00000532354 DDR1Q08345 913 aa22.07■■□□□ 1.12
CAVIN3-204ENST00000532354 ZNF496Q96IT1 587 aaPredicted RBP22.07■■□□□ 1.12
CAVIN3-204ENST00000532354 CEMIPQ8WUJ3 1361 aa22.07■■□□□ 1.12
CAVIN3-204ENST00000532354 UBR2Q8IWV8 1755 aa22.07■■□□□ 1.12
CAVIN3-204ENST00000532354 USPL1Q5W0Q7 1092 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms