RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 LINC00116Q8NCU8 138 aa30.82■■■□□ 2.52
PPP1CA-207ENST00000532279 CFAP53Q96M91 514 aa30.82■■■□□ 2.52
PPP1CA-207ENST00000532279 UBR3Q6ZT12 1888 aa30.82■■■□□ 2.52
PPP1CA-207ENST00000532279 COL24A1Q17RW2 1714 aa30.81■■■□□ 2.52
PPP1CA-207ENST00000532279 PPP2R1AP30153 589 aa30.81■■■□□ 2.52
PPP1CA-207ENST00000532279 ARXQ96QS3 562 aa30.81■■■□□ 2.52
PPP1CA-207ENST00000532279 ITPK1Q13572 414 aa30.8■■■□□ 2.52
PPP1CA-207ENST00000532279 RBM42Q9BTD8 480 aaKnown RBP30.8■■■□□ 2.52
PPP1CA-207ENST00000532279 FHDC1Q9C0D6 1143 aaPredicted RBP30.8■■■□□ 2.52
PPP1CA-207ENST00000532279 MTHFSDQ2M296 383 aaKnown RBP30.79■■■□□ 2.52
PPP1CA-207ENST00000532279 NFATC2IPQ8NCF5 419 aa30.79■■■□□ 2.52
PPP1CA-207ENST00000532279 POLD1P28340 1107 aa30.78■■■□□ 2.52
PPP1CA-207ENST00000532279 PHF14O94880 888 aa30.76■■■□□ 2.51
PPP1CA-207ENST00000532279 SMIM5Q71RC9 77 aa30.76■■■□□ 2.51
PPP1CA-207ENST00000532279 AMIGO3Q86WK7 504 aa30.76■■■□□ 2.51
PPP1CA-207ENST00000532279 LGR6Q9HBX8 967 aa30.76■■■□□ 2.51
PPP1CA-207ENST00000532279 MSL1Q68DK7 614 aa30.75■■■□□ 2.51
PPP1CA-207ENST00000532279 FLAD1Q8NFF5 587 aa30.75■■■□□ 2.51
PPP1CA-207ENST00000532279 ZNF831Q5JPB2 1677 aa30.74■■■□□ 2.51
PPP1CA-207ENST00000532279 SLC4A9Q96Q91 983 aa30.74■■■□□ 2.51
PPP1CA-207ENST00000532279 SYT17Q9BSW7 474 aa30.74■■■□□ 2.51
PPP1CA-207ENST00000532279 COL5A3P25940 1745 aaPredicted RBP30.73■■■□□ 2.51
PPP1CA-207ENST00000532279 RNMTO43148 476 aaKnown RBP30.72■■■□□ 2.51
PPP1CA-207ENST00000532279 KLHL34Q8N239 644 aa30.72■■■□□ 2.51
PPP1CA-207ENST00000532279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.71■■■□□ 2.51
PPP1CA-207ENST00000532279 GNPATO15228 680 aa30.71■■■□□ 2.51
PPP1CA-207ENST00000532279 PTCD1O75127 700 aaKnown RBP30.71■■■□□ 2.51
PPP1CA-207ENST00000532279 DCAF8L1A6NGE4 600 aa30.7■■■□□ 2.51
PPP1CA-207ENST00000532279 SLC52A2Q9HAB3 445 aa30.7■■■□□ 2.51
PPP1CA-207ENST00000532279 NUDCQ9Y266 331 aa30.7■■■□□ 2.51
PPP1CA-207ENST00000532279 ADAMTS7Q9UKP4 1686 aa30.69■■■□□ 2.5
PPP1CA-207ENST00000532279 MRC1P22897 1456 aa30.69■■■□□ 2.5
PPP1CA-207ENST00000532279 SSFA2P28290 1259 aa30.68■■■□□ 2.5
PPP1CA-207ENST00000532279 PRKAR2BP31323 418 aa30.67■■■□□ 2.5
PPP1CA-207ENST00000532279 U2AF1L5P0DN76 240 aaPredicted RBP30.66■■■□□ 2.5
PPP1CA-207ENST00000532279 U2AF1Q01081 240 aaKnown RBP eCLIP30.66■■■□□ 2.5
PPP1CA-207ENST00000532279 GAS2L2Q8NHY3 880 aa30.66■■■□□ 2.5
PPP1CA-207ENST00000532279 RSPH6AQ9H0K4 717 aa30.66■■■□□ 2.5
PPP1CA-207ENST00000532279 TJP1Q07157 1748 aa30.65■■■□□ 2.5
PPP1CA-207ENST00000532279 MAP3K5Q99683 1374 aa30.65■■■□□ 2.5
PPP1CA-207ENST00000532279 MYH14Q7Z406 1995 aaKnown RBP30.65■■■□□ 2.5
PPP1CA-207ENST00000532279 DDX10Q13206 875 aaKnown RBP30.63■■■□□ 2.49
PPP1CA-207ENST00000532279 SLC39A6Q13433 755 aa30.63■■■□□ 2.49
PPP1CA-207ENST00000532279 PHACTR3Q96KR7 559 aa30.63■■■□□ 2.49
PPP1CA-207ENST00000532279 RTCBQ9Y3I0 505 aaKnown RBP30.62■■■□□ 2.49
PPP1CA-207ENST00000532279 CNTNAP4Q9C0A0 1308 aa30.62■■■□□ 2.49
PPP1CA-207ENST00000532279 GNAT3A8MTJ3 354 aa30.61■■■□□ 2.49
PPP1CA-207ENST00000532279 RC3H1Q5TC82 1133 aaKnown RBP30.6■■■□□ 2.49
PPP1CA-207ENST00000532279 CICQ96RK0 1608 aaPredicted RBP30.6■■■□□ 2.49
PPP1CA-207ENST00000532279 TRAPPC3LQ5T215 181 aa30.58■■■□□ 2.49
PPP1CA-207ENST00000532279 IL17REQ8NFR9 667 aa30.57■■■□□ 2.48
PPP1CA-207ENST00000532279 SIPA1L3O60292 1781 aaPredicted RBP30.56■■■□□ 2.48
PPP1CA-207ENST00000532279 FCHSD2O94868 740 aa30.56■■■□□ 2.48
PPP1CA-207ENST00000532279 CRKLP46109 303 aaKnown RBP30.56■■■□□ 2.48
PPP1CA-207ENST00000532279 NLGN2Q8NFZ4 835 aa30.56■■■□□ 2.48
PPP1CA-207ENST00000532279 KCPQ6ZWJ8 1503 aa30.56■■■□□ 2.48
PPP1CA-207ENST00000532279 C4AP0C0L4 1744 aa30.56■■■□□ 2.48
PPP1CA-207ENST00000532279 RPS6KA4O75676 772 aa30.55■■■□□ 2.48
PPP1CA-207ENST00000532279 TEFQ10587 303 aa30.55■■■□□ 2.48
PPP1CA-207ENST00000532279 DNAJC10Q8IXB1 793 aa30.55■■■□□ 2.48
PPP1CA-207ENST00000532279 UBR2Q8IWV8 1755 aa30.55■■■□□ 2.48
PPP1CA-207ENST00000532279 ARHGEF1Q92888 912 aaKnown RBP30.53■■■□□ 2.48
PPP1CA-207ENST00000532279 ADRA2BP18089 450 aa30.52■■■□□ 2.48
PPP1CA-207ENST00000532279 RFC4P35249 363 aa30.51■■■□□ 2.47
PPP1CA-207ENST00000532279 RALBP1Q15311 655 aa30.51■■■□□ 2.47
PPP1CA-207ENST00000532279 TTC5Q8N0Z6 440 aa30.51■■■□□ 2.47
PPP1CA-207ENST00000532279 PELP1Q8IZL8 1130 aaKnown RBP30.5■■■□□ 2.47
PPP1CA-207ENST00000532279 YY1P25490 414 aa30.49■■■□□ 2.47
PPP1CA-207ENST00000532279 GPR162Q16538 588 aa30.49■■■□□ 2.47
PPP1CA-207ENST00000532279 CEMIPQ8WUJ3 1361 aa30.49■■■□□ 2.47
PPP1CA-207ENST00000532279 INTS5Q6P9B9 1019 aaKnown RBP30.48■■■□□ 2.47
PPP1CA-207ENST00000532279 RTF1Q92541 710 aaKnown RBP30.47■■■□□ 2.47
PPP1CA-207ENST00000532279 CCDC87Q9NVE4 849 aa30.47■■■□□ 2.47
PPP1CA-207ENST00000532279 DLG5Q8TDM6 1919 aa30.46■■■□□ 2.47
PPP1CA-207ENST00000532279 MMP10P09238 476 aa30.46■■■□□ 2.47
PPP1CA-207ENST00000532279 CD2APQ9Y5K6 639 aa30.46■■■□□ 2.47
PPP1CA-207ENST00000532279 NEFMP07197 916 aa30.45■■■□□ 2.47
PPP1CA-207ENST00000532279 CYP19A1P11511 503 aaPredicted RBP30.45■■■□□ 2.47
PPP1CA-207ENST00000532279 ZNF790Q6PG37 636 aa30.45■■■□□ 2.47
PPP1CA-207ENST00000532279 MCM10Q7L590 875 aa30.45■■■□□ 2.47
PPP1CA-207ENST00000532279 VSIG10Q8N0Z9 540 aa30.45■■■□□ 2.47
PPP1CA-207ENST00000532279 CHD4Q14839 1912 aa30.44■■■□□ 2.46
PPP1CA-207ENST00000532279 GYS1P13807 737 aa30.44■■■□□ 2.46
PPP1CA-207ENST00000532279 NLGN1Q8N2Q7 840 aa30.44■■■□□ 2.46
PPP1CA-207ENST00000532279 ZNF496Q96IT1 587 aaPredicted RBP30.44■■■□□ 2.46
PPP1CA-207ENST00000532279 SRP68Q9UHB9 627 aaKnown RBP30.43■■■□□ 2.46
PPP1CA-207ENST00000532279 BTBD11A6QL63 1104 aa30.42■■■□□ 2.46
PPP1CA-207ENST00000532279 ZEB1P37275 1124 aaPredicted RBP30.42■■■□□ 2.46
PPP1CA-207ENST00000532279 DCTN1Q14203 1278 aa30.42■■■□□ 2.46
PPP1CA-207ENST00000532279 ZBTB1Q9Y2K1 713 aa30.41■■■□□ 2.46
PPP1CA-207ENST00000532279 SOS1Q07889 1333 aaPredicted RBP30.4■■■□□ 2.46
PPP1CA-207ENST00000532279 MYBBP1AQ9BQG0 1328 aaKnown RBP30.4■■■□□ 2.46
PPP1CA-207ENST00000532279 USP42Q9H9J4 1324 aaKnown RBP30.4■■■□□ 2.46
PPP1CA-207ENST00000532279 HEG1Q9ULI3 1381 aa30.4■■■□□ 2.46
PPP1CA-207ENST00000532279 KCNQ3O43525 872 aa30.39■■■□□ 2.46
PPP1CA-207ENST00000532279 PLEKHF1Q96S99 279 aa30.39■■■□□ 2.46
PPP1CA-207ENST00000532279 FMNL2Q96PY5 1086 aa30.38■■■□□ 2.45
PPP1CA-207ENST00000532279 CANXP27824 592 aaKnown RBP30.37■■■□□ 2.45
PPP1CA-207ENST00000532279 HTATSF1O43719 755 aaKnown RBP30.36■■■□□ 2.45
PPP1CA-207ENST00000532279 STARD3NLO95772 234 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms