RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SPATA31A3Q5VYP0 1347 aa15.5■□□□□ 0.07
CHD7-211ENST00000532149 C1orf141Q5JVX7 400 aa15.5■□□□□ 0.07
CHD7-211ENST00000532149 TMEM57Q8N5G2 664 aa15.5■□□□□ 0.07
CHD7-211ENST00000532149 ANKRD24Q8TF21 1146 aa15.5■□□□□ 0.07
CHD7-211ENST00000532149 RBM33Q96EV2 1170 aaKnown RBP15.5■□□□□ 0.07
CHD7-211ENST00000532149 NBPF6Q5VWK0 638 aa15.49■□□□□ 0.07
CHD7-211ENST00000532149 LMOD2Q6P5Q4 547 aa15.49■□□□□ 0.07
CHD7-211ENST00000532149 TSPYL6Q8N831 410 aa15.49■□□□□ 0.07
CHD7-211ENST00000532149 NBPF4Q96M43 638 aa15.49■□□□□ 0.07
CHD7-211ENST00000532149 LMO7Q8WWI1 1683 aa15.48■□□□□ 0.07
CHD7-211ENST00000532149 PXDNQ92626 1479 aa15.48■□□□□ 0.07
CHD7-211ENST00000532149 ZBTB7BO15156 539 aaPredicted RBP15.48■□□□□ 0.07
CHD7-211ENST00000532149 CCT4P50991 539 aaKnown RBP15.48■□□□□ 0.07
CHD7-211ENST00000532149 DCTN1Q14203 1278 aa15.48■□□□□ 0.07
CHD7-211ENST00000532149 SMC5Q8IY18 1101 aa15.48■□□□□ 0.07
CHD7-211ENST00000532149 PCDHB15Q9Y5E8 787 aa15.48■□□□□ 0.07
CHD7-211ENST00000532149 ERBB3P21860 1342 aa15.47■□□□□ 0.07
CHD7-211ENST00000532149 IGHDP01880 384 aa15.47■□□□□ 0.07
CHD7-211ENST00000532149 HSP90AB1P08238 724 aaKnown RBP15.47■□□□□ 0.07
CHD7-211ENST00000532149 LTV1Q96GA3 475 aaPredicted RBP15.47■□□□□ 0.07
CHD7-211ENST00000532149 SLAIN2Q9P270 581 aa15.47■□□□□ 0.07
CHD7-211ENST00000532149 SPG7Q9UQ90 795 aa15.47■□□□□ 0.07
CHD7-211ENST00000532149 SOS2Q07890 1332 aaPredicted RBP15.46■□□□□ 0.07
CHD7-211ENST00000532149 HSPA2P54652 639 aa15.46■□□□□ 0.07
CHD7-211ENST00000532149 TEFQ10587 303 aa15.46■□□□□ 0.07
CHD7-211ENST00000532149 RPAP2Q8IXW5 612 aaPredicted RBP15.46■□□□□ 0.07
CHD7-211ENST00000532149 RAPGEF4Q8WZA2 1011 aa15.46■□□□□ 0.07
CHD7-211ENST00000532149 DDRGK1Q96HY6 314 aa15.46■□□□□ 0.07
CHD7-211ENST00000532149 ZNF579Q8NAF0 562 aaKnown RBP15.45■□□□□ 0.06
CHD7-211ENST00000532149 IL17REQ8NFR9 667 aa15.45■□□□□ 0.06
CHD7-211ENST00000532149 HDAC5Q9UQL6 1122 aa15.45■□□□□ 0.06
CHD7-211ENST00000532149 XIRP1Q702N8 1843 aaKnown RBP15.45■□□□□ 0.06
CHD7-211ENST00000532149 ZNF530Q6P9A1 599 aaPredicted RBP15.44■□□□□ 0.06
CHD7-211ENST00000532149 BRINP3Q76B58 766 aa15.44■□□□□ 0.06
CHD7-211ENST00000532149 ELL2O00472 640 aaPredicted RBP15.43■□□□□ 0.06
CHD7-211ENST00000532149 TATP17735 454 aaPredicted RBP15.43■□□□□ 0.06
CHD7-211ENST00000532149 PXDNLA1KZ92 1463 aa15.43■□□□□ 0.06
CHD7-211ENST00000532149 HMMRO75330 724 aa15.42■□□□□ 0.06
CHD7-211ENST00000532149 COL18A1P39060 1754 aa15.41■□□□□ 0.06
CHD7-211ENST00000532149 ADAMTS7Q9UKP4 1686 aa15.41■□□□□ 0.06
CHD7-211ENST00000532149 IPO9Q96P70 1041 aaKnown RBP15.41■□□□□ 0.06
CHD7-211ENST00000532149 UPF2Q9HAU5 1272 aaKnown RBP15.41■□□□□ 0.06
CHD7-211ENST00000532149 CRYBG1Q9Y4K1 1723 aa15.4■□□□□ 0.06
CHD7-211ENST00000532149 IBTKQ9P2D0 1353 aaPredicted RBP15.4■□□□□ 0.06
CHD7-211ENST00000532149 GNAI3P08754 354 aa15.4■□□□□ 0.06
CHD7-211ENST00000532149 XPCQ01831 940 aaPredicted RBP15.4■□□□□ 0.06
CHD7-211ENST00000532149 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
CHD7-211ENST00000532149 PDZRN3Q9UPQ7 1066 aa15.4■□□□□ 0.06
CHD7-211ENST00000532149 BTBD11A6QL63 1104 aa15.39■□□□□ 0.05
CHD7-211ENST00000532149 RNMTO43148 476 aaKnown RBP15.39■□□□□ 0.05
CHD7-211ENST00000532149 NUCB1Q02818 461 aa15.39■□□□□ 0.05
CHD7-211ENST00000532149 IFNL2Q8IZJ0 200 aa15.39■□□□□ 0.05
CHD7-211ENST00000532149 TNNQ9UQP3 1299 aa15.39■□□□□ 0.05
CHD7-211ENST00000532149 KDM3BQ7LBC6 1761 aa15.39■□□□□ 0.05
CHD7-211ENST00000532149 ZBTB7CA1YPR0 619 aa15.38■□□□□ 0.05
CHD7-211ENST00000532149 RGS3P49796 1198 aa15.38■□□□□ 0.05
CHD7-211ENST00000532149 EIF4A1P60842 406 aaKnown RBP15.38■□□□□ 0.05
CHD7-211ENST00000532149 PLSCR2Q9NRY7 297 aa15.38■□□□□ 0.05
CHD7-211ENST00000532149 AXIN2Q9Y2T1 843 aa15.38■□□□□ 0.05
CHD7-211ENST00000532149 VIRMAQ69YN4 1812 aaKnown RBP15.38■□□□□ 0.05
CHD7-211ENST00000532149 ZC3H6P61129 1189 aaKnown RBP15.37■□□□□ 0.05
CHD7-211ENST00000532149 NLRP2Q9NX02 1062 aa15.37■□□□□ 0.05
CHD7-211ENST00000532149 NHSL1Q5SYE7 1610 aa15.36■□□□□ 0.05
CHD7-211ENST00000532149 CSB-PGBD3P0DP91 1061 aa15.36■□□□□ 0.05
CHD7-211ENST00000532149 FLIIQ13045 1269 aa15.36■□□□□ 0.05
CHD7-211ENST00000532149 C8orf34Q49A92 452 aa15.36■□□□□ 0.05
CHD7-211ENST00000532149 HDGFL1Q5TGJ6 251 aa15.36■□□□□ 0.05
CHD7-211ENST00000532149 ERICH6Q7L0X2 663 aa15.36■□□□□ 0.05
CHD7-211ENST00000532149 USHBP1Q8N6Y0 703 aa15.36■□□□□ 0.05
CHD7-211ENST00000532149 ANKRD44Q8N8A2 993 aa15.36■□□□□ 0.05
CHD7-211ENST00000532149 LRRC59Q96AG4 307 aaKnown RBP15.36■□□□□ 0.05
CHD7-211ENST00000532149 DCAF5Q96JK2 942 aa15.36■□□□□ 0.05
CHD7-211ENST00000532149 DBF4Q9UBU7 674 aaPredicted RBP15.36■□□□□ 0.05
CHD7-211ENST00000532149 ZNF335Q9H4Z2 1342 aaPredicted RBP15.36■□□□□ 0.05
CHD7-211ENST00000532149 RGPD2P0DJD1 1756 aa15.36■□□□□ 0.05
CHD7-211ENST00000532149 N4BP2Q86UW6 1770 aaPredicted RBP15.36■□□□□ 0.05
CHD7-211ENST00000532149 RGS12O14924 1447 aa15.35■□□□□ 0.05
CHD7-211ENST00000532149 CLCN6P51797 869 aa15.35■□□□□ 0.05
CHD7-211ENST00000532149 CHD1LQ86WJ1 897 aa15.35■□□□□ 0.05
CHD7-211ENST00000532149 DCTPP1Q9H773 170 aa15.35■□□□□ 0.05
CHD7-211ENST00000532149 WDR17Q8IZU2 1322 aa15.35■□□□□ 0.05
CHD7-211ENST00000532149 HEG1Q9ULI3 1381 aa15.35■□□□□ 0.05
CHD7-211ENST00000532149 HYPKQ9NX55 129 aa15.34■□□□□ 0.05
CHD7-211ENST00000532149 RGPD5Q99666 1765 aa15.34■□□□□ 0.05
CHD7-211ENST00000532149 GNAI2P04899 355 aa15.33■□□□□ 0.04
CHD7-211ENST00000532149 FKBP5Q13451 457 aaPredicted RBP15.33■□□□□ 0.04
CHD7-211ENST00000532149 CARD10Q9BWT7 1032 aa15.33■□□□□ 0.04
CHD7-211ENST00000532149 PRDM11Q9NQV5 511 aa15.33■□□□□ 0.04
CHD7-211ENST00000532149 MIS18AQ9NYP9 233 aa15.33■□□□□ 0.04
CHD7-211ENST00000532149 PKD1L3Q7Z443 1732 aa15.33■□□□□ 0.04
CHD7-211ENST00000532149 SIPA1L3O60292 1781 aaPredicted RBP15.33■□□□□ 0.04
CHD7-211ENST00000532149 PARP4Q9UKK3 1724 aaKnown RBP15.32■□□□□ 0.04
CHD7-211ENST00000532149 SCN11AQ9UI33 1791 aa15.32■□□□□ 0.04
CHD7-211ENST00000532149 DDX58O95786 925 aaKnown RBP15.32■□□□□ 0.04
CHD7-211ENST00000532149 PHKG2P15735 406 aa15.32■□□□□ 0.04
CHD7-211ENST00000532149 MYT1Q01538 1121 aa15.32■□□□□ 0.04
CHD7-211ENST00000532149 GALR2O43603 387 aaPredicted RBP15.31■□□□□ 0.04
CHD7-211ENST00000532149 BMP2KLQ5H9B9 411 aa15.31■□□□□ 0.04
CHD7-211ENST00000532149 SLC52A2Q9HAB3 445 aa15.31■□□□□ 0.04
CHD7-211ENST00000532149 LGR6Q9HBX8 967 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms