RNA–Protein interactions for RNA: ENST00000531789.1

SLC39A4-208, Transcript of solute carrier family 39 member 4, humanhuman

TSL 3

Gene SLC39A4, Length 361 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-208ENST00000531789 LOC102724428A0A0B4J2F2 783 aa17.74■□□□□ 0.43
SLC39A4-208ENST00000531789 GNPATO15228 680 aa17.74■□□□□ 0.43
SLC39A4-208ENST00000531789 DPEP1P16444 411 aa17.74■□□□□ 0.43
SLC39A4-208ENST00000531789 SIK1P57059 783 aa17.74■□□□□ 0.43
SLC39A4-208ENST00000531789 ITPK1Q13572 414 aa17.74■□□□□ 0.43
SLC39A4-208ENST00000531789 FCHSD2O94868 740 aa17.73■□□□□ 0.43
SLC39A4-208ENST00000531789 KCPQ6ZWJ8 1503 aa17.72■□□□□ 0.43
SLC39A4-208ENST00000531789 BRCA1P38398 1863 aaKnown RBP17.72■□□□□ 0.43
SLC39A4-208ENST00000531789 RTL1A6NKG5 1358 aa17.72■□□□□ 0.43
SLC39A4-208ENST00000531789 TMF1P82094 1093 aa17.72■□□□□ 0.43
SLC39A4-208ENST00000531789 RRAGCQ9HB90 399 aa17.72■□□□□ 0.43
SLC39A4-208ENST00000531789 HSP90AB2PQ58FF8 381 aa17.71■□□□□ 0.43
SLC39A4-208ENST00000531789 C10orf71Q711Q0 1435 aa17.71■□□□□ 0.43
SLC39A4-208ENST00000531789 PKD1L3Q7Z443 1732 aa17.7■□□□□ 0.42
SLC39A4-208ENST00000531789 KCNA3P22001 575 aa17.7■□□□□ 0.42
SLC39A4-208ENST00000531789 ASAP1Q9ULH1 1129 aa17.7■□□□□ 0.42
SLC39A4-208ENST00000531789 SMG6Q86US8 1419 aaKnown RBP17.69■□□□□ 0.42
SLC39A4-208ENST00000531789 PLEKHG2Q9H7P9 1386 aa17.68■□□□□ 0.42
SLC39A4-208ENST00000531789 HSPA1AP0DMV8 641 aaKnown RBP17.68■□□□□ 0.42
SLC39A4-208ENST00000531789 HSPA1BP0DMV9 641 aaKnown RBP17.68■□□□□ 0.42
SLC39A4-208ENST00000531789 ATP6V1AP38606 617 aa17.68■□□□□ 0.42
SLC39A4-208ENST00000531789 NKX1-1Q15270 411 aaPredicted RBP17.68■□□□□ 0.42
SLC39A4-208ENST00000531789 KDM2BQ8NHM5 1336 aa17.68■□□□□ 0.42
SLC39A4-208ENST00000531789 ARFGEF1Q9Y6D6 1849 aa17.68■□□□□ 0.42
SLC39A4-208ENST00000531789 NLGN1Q8N2Q7 840 aa17.67■□□□□ 0.42
SLC39A4-208ENST00000531789 GGNBP2Q9H3C7 697 aa17.67■□□□□ 0.42
SLC39A4-208ENST00000531789 C4AP0C0L4 1744 aa17.67■□□□□ 0.42
SLC39A4-208ENST00000531789 INSRP06213 1382 aa17.66■□□□□ 0.42
SLC39A4-208ENST00000531789 TRAPPC3LQ5T215 181 aa17.66■□□□□ 0.42
SLC39A4-208ENST00000531789 CCDC87Q9NVE4 849 aa17.66■□□□□ 0.42
SLC39A4-208ENST00000531789 RNF181Q9P0P0 153 aa17.66■□□□□ 0.42
SLC39A4-208ENST00000531789 FYB1O15117 783 aa17.65■□□□□ 0.42
SLC39A4-208ENST00000531789 CDCA8Q53HL2 280 aa17.65■□□□□ 0.42
SLC39A4-208ENST00000531789 ARHGEF1Q92888 912 aaKnown RBP17.65■□□□□ 0.42
SLC39A4-208ENST00000531789 TNRC6CQ9HCJ0 1690 aaKnown RBP17.64■□□□□ 0.42
SLC39A4-208ENST00000531789 GYS1P13807 737 aa17.64■□□□□ 0.41
SLC39A4-208ENST00000531789 SMC1BQ8NDV3 1235 aa17.64■□□□□ 0.41
SLC39A4-208ENST00000531789 DCAF5Q96JK2 942 aa17.64■□□□□ 0.41
SLC39A4-208ENST00000531789 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
SLC39A4-208ENST00000531789 TMOD3Q9NYL9 352 aa17.64■□□□□ 0.41
SLC39A4-208ENST00000531789 RTCBQ9Y3I0 505 aaKnown RBP17.64■□□□□ 0.41
SLC39A4-208ENST00000531789 SBF1O95248 1867 aa17.63■□□□□ 0.41
SLC39A4-208ENST00000531789 PIM2Q9P1W9 311 aa17.63■□□□□ 0.41
SLC39A4-208ENST00000531789 SLC4A9Q96Q91 983 aa17.62■□□□□ 0.41
SLC39A4-208ENST00000531789 PARP3Q9Y6F1 533 aa17.62■□□□□ 0.41
SLC39A4-208ENST00000531789 DALRD3Q5D0E6 543 aaKnown RBP17.61■□□□□ 0.41
SLC39A4-208ENST00000531789 FLT4P35916 1363 aa17.61■□□□□ 0.41
SLC39A4-208ENST00000531789 SPG7Q9UQ90 795 aa17.6■□□□□ 0.41
SLC39A4-208ENST00000531789 NCAPD2Q15021 1401 aa17.58■□□□□ 0.41
SLC39A4-208ENST00000531789 KDRP35968 1356 aa17.58■□□□□ 0.4
SLC39A4-208ENST00000531789 CHRNA5P30532 468 aa17.58■□□□□ 0.4
SLC39A4-208ENST00000531789 RFC4P35249 363 aa17.58■□□□□ 0.4
SLC39A4-208ENST00000531789 POLR3GLQ9BT43 218 aa17.58■□□□□ 0.4
SLC39A4-208ENST00000531789 SLC34A2O95436 690 aa17.57■□□□□ 0.4
SLC39A4-208ENST00000531789 PHKG2P15735 406 aa17.57■□□□□ 0.4
SLC39A4-208ENST00000531789 ADRA2BP18089 450 aa17.57■□□□□ 0.4
SLC39A4-208ENST00000531789 RC3H1Q5TC82 1133 aaKnown RBP17.57■□□□□ 0.4
SLC39A4-208ENST00000531789 EMILIN1Q9Y6C2 1016 aa17.57■□□□□ 0.4
SLC39A4-208ENST00000531789 COL5A3P25940 1745 aaPredicted RBP17.56■□□□□ 0.4
SLC39A4-208ENST00000531789 RPS6KA4O75676 772 aa17.56■□□□□ 0.4
SLC39A4-208ENST00000531789 EIF4G2P78344 907 aaKnown RBP eCLIP17.56■□□□□ 0.4
SLC39A4-208ENST00000531789 RASSF7Q02833 373 aa17.56■□□□□ 0.4
SLC39A4-208ENST00000531789 RBM42Q9BTD8 480 aaKnown RBP17.56■□□□□ 0.4
SLC39A4-208ENST00000531789 KIF24Q5T7B8 1368 aa17.55■□□□□ 0.4
SLC39A4-208ENST00000531789 MYH14Q7Z406 1995 aaKnown RBP17.55■□□□□ 0.4
SLC39A4-208ENST00000531789 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
SLC39A4-208ENST00000531789 DDR1Q08345 913 aa17.55■□□□□ 0.4
SLC39A4-208ENST00000531789 IFNL2Q8IZJ0 200 aa17.55■□□□□ 0.4
SLC39A4-208ENST00000531789 SRP68Q9UHB9 627 aaKnown RBP17.55■□□□□ 0.4
SLC39A4-208ENST00000531789 CNTNAP4Q9C0A0 1308 aa17.54■□□□□ 0.4
SLC39A4-208ENST00000531789 VEGFAP15692 232 aaPredicted RBP17.54■□□□□ 0.4
SLC39A4-208ENST00000531789 FKBP8Q14318 412 aa17.54■□□□□ 0.4
SLC39A4-208ENST00000531789 EYA1Q99502 592 aa17.54■□□□□ 0.4
SLC39A4-208ENST00000531789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.54■□□□□ 0.4
SLC39A4-208ENST00000531789 ZNF831Q5JPB2 1677 aa17.54■□□□□ 0.4
SLC39A4-208ENST00000531789 GLTPD2A6NH11 291 aa17.53■□□□□ 0.4
SLC39A4-208ENST00000531789 KIF20BQ96Q89 1820 aa17.53■□□□□ 0.4
SLC39A4-208ENST00000531789 CARD14Q9BXL6 1004 aa17.52■□□□□ 0.4
SLC39A4-208ENST00000531789 KDM6AO15550 1401 aaPredicted RBP17.52■□□□□ 0.4
SLC39A4-208ENST00000531789 POTECB2RU33 542 aa17.51■□□□□ 0.39
SLC39A4-208ENST00000531789 PPM1GO15355 546 aaPredicted RBP17.51■□□□□ 0.39
SLC39A4-208ENST00000531789 ZC3H4Q9UPT8 1303 aaKnown RBP17.49■□□□□ 0.39
SLC39A4-208ENST00000531789 FOXN1O15353 648 aa17.49■□□□□ 0.39
SLC39A4-208ENST00000531789 LMNB1P20700 586 aa17.49■□□□□ 0.39
SLC39A4-208ENST00000531789 MKRN1Q9UHC7 482 aaKnown RBP17.49■□□□□ 0.39
SLC39A4-208ENST00000531789 CCDC88AQ3V6T2 1871 aa17.49■□□□□ 0.39
SLC39A4-208ENST00000531789 POLRMTO00411 1230 aaKnown RBP17.48■□□□□ 0.39
SLC39A4-208ENST00000531789 TM4SF1P30408 202 aa17.48■□□□□ 0.39
SLC39A4-208ENST00000531789 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
SLC39A4-208ENST00000531789 ERVV-2B6SEH9 535 aa17.47■□□□□ 0.39
SLC39A4-208ENST00000531789 CRKLP46109 303 aaKnown RBP17.47■□□□□ 0.39
SLC39A4-208ENST00000531789 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
SLC39A4-208ENST00000531789 WASHC2AQ641Q2 1341 aa17.47■□□□□ 0.39
SLC39A4-208ENST00000531789 PTCD1O75127 700 aaKnown RBP17.46■□□□□ 0.39
SLC39A4-208ENST00000531789 ANKRD26Q9UPS8 1709 aa17.46■□□□□ 0.39
SLC39A4-208ENST00000531789 CREBZFQ9NS37 354 aa17.44■□□□□ 0.38
SLC39A4-208ENST00000531789 ADAMTS7Q9UKP4 1686 aa17.44■□□□□ 0.38
SLC39A4-208ENST00000531789 AFDNP55196 1824 aaKnown RBP17.43■□□□□ 0.38
SLC39A4-208ENST00000531789 NFKBIEO00221 500 aa17.43■□□□□ 0.38
SLC39A4-208ENST00000531789 PRDM10Q9NQV6 1147 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms