RNA–Protein interactions for RNA: ENST00000531597.1

PACS1-212, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-212ENST00000531597 ATG3Q9NT62 314 aa20.79■□□□□ 0.92
PACS1-212ENST00000531597 TMF1P82094 1093 aa20.78■□□□□ 0.92
PACS1-212ENST00000531597 CARD14Q9BXL6 1004 aa20.78■□□□□ 0.92
PACS1-212ENST00000531597 KIF20BQ96Q89 1820 aa20.78■□□□□ 0.92
PACS1-212ENST00000531597 N4BP2Q86UW6 1770 aaPredicted RBP20.77■□□□□ 0.92
PACS1-212ENST00000531597 PHKG2P15735 406 aa20.77■□□□□ 0.92
PACS1-212ENST00000531597 ARHGAP27Q6ZUM4 889 aa20.77■□□□□ 0.92
PACS1-212ENST00000531597 EYA1Q99502 592 aa20.77■□□□□ 0.92
PACS1-212ENST00000531597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.77■□□□□ 0.92
PACS1-212ENST00000531597 C10orf71Q711Q0 1435 aa20.77■□□□□ 0.91
PACS1-212ENST00000531597 DPEP1P16444 411 aa20.76■□□□□ 0.91
PACS1-212ENST00000531597 PPM1GO15355 546 aaPredicted RBP20.75■□□□□ 0.91
PACS1-212ENST00000531597 TRAPPC3LQ5T215 181 aa20.75■□□□□ 0.91
PACS1-212ENST00000531597 IFNL2Q8IZJ0 200 aa20.75■□□□□ 0.91
PACS1-212ENST00000531597 NLGN1Q8N2Q7 840 aa20.75■□□□□ 0.91
PACS1-212ENST00000531597 SLC4A9Q96Q91 983 aa20.75■□□□□ 0.91
PACS1-212ENST00000531597 WASHC2AQ641Q2 1341 aa20.75■□□□□ 0.91
PACS1-212ENST00000531597 KDRP35968 1356 aa20.74■□□□□ 0.91
PACS1-212ENST00000531597 ARHGEF1Q92888 912 aaKnown RBP20.74■□□□□ 0.91
PACS1-212ENST00000531597 RTCBQ9Y3I0 505 aaKnown RBP20.74■□□□□ 0.91
PACS1-212ENST00000531597 FCHSD2O94868 740 aa20.73■□□□□ 0.91
PACS1-212ENST00000531597 GYS1P13807 737 aa20.72■□□□□ 0.91
PACS1-212ENST00000531597 KCNA3P22001 575 aa20.72■□□□□ 0.91
PACS1-212ENST00000531597 HTRA3P83110 453 aa20.72■□□□□ 0.91
PACS1-212ENST00000531597 RBM46Q8TBY0 533 aaKnown RBP20.72■□□□□ 0.91
PACS1-212ENST00000531597 C9orf131Q5VYM1 1079 aa20.71■□□□□ 0.91
PACS1-212ENST00000531597 CCDC87Q9NVE4 849 aa20.71■□□□□ 0.91
PACS1-212ENST00000531597 ANKRD26Q9UPS8 1709 aa20.7■□□□□ 0.9
PACS1-212ENST00000531597 RC3H1Q5TC82 1133 aaKnown RBP20.7■□□□□ 0.9
PACS1-212ENST00000531597 C4AP0C0L4 1744 aa20.7■□□□□ 0.9
PACS1-212ENST00000531597 WDR90Q96KV7 1748 aa20.7■□□□□ 0.9
PACS1-212ENST00000531597 ADRA2BP18089 450 aa20.69■□□□□ 0.9
PACS1-212ENST00000531597 COL13A1Q5TAT6 717 aaPredicted RBP20.69■□□□□ 0.9
PACS1-212ENST00000531597 KLRG1Q96E93 195 aa20.69■□□□□ 0.9
PACS1-212ENST00000531597 BRCA1P38398 1863 aaKnown RBP20.69■□□□□ 0.9
PACS1-212ENST00000531597 RPS6KA4O75676 772 aa20.68■□□□□ 0.9
PACS1-212ENST00000531597 JMYQ8N9B5 988 aa20.68■□□□□ 0.9
PACS1-212ENST00000531597 RBM42Q9BTD8 480 aaKnown RBP20.68■□□□□ 0.9
PACS1-212ENST00000531597 POLKQ9UBT6 870 aa20.68■□□□□ 0.9
PACS1-212ENST00000531597 PARP3Q9Y6F1 533 aa20.68■□□□□ 0.9
PACS1-212ENST00000531597 CNTNAP4Q9C0A0 1308 aa20.68■□□□□ 0.9
PACS1-212ENST00000531597 RFC4P35249 363 aa20.67■□□□□ 0.9
PACS1-212ENST00000531597 CDCA8Q53HL2 280 aa20.67■□□□□ 0.9
PACS1-212ENST00000531597 ZNF831Q5JPB2 1677 aa20.67■□□□□ 0.9
PACS1-212ENST00000531597 ERVV-2B6SEH9 535 aa20.66■□□□□ 0.9
PACS1-212ENST00000531597 FSTL1Q12841 308 aa20.66■□□□□ 0.9
PACS1-212ENST00000531597 DCAF5Q96JK2 942 aa20.66■□□□□ 0.9
PACS1-212ENST00000531597 PLEKHG2Q9H7P9 1386 aa20.65■□□□□ 0.9
PACS1-212ENST00000531597 EIF4A2Q14240 407 aaKnown RBP20.65■□□□□ 0.9
PACS1-212ENST00000531597 C16orf71Q8IYS4 520 aaPredicted RBP20.65■□□□□ 0.9
PACS1-212ENST00000531597 PIM2Q9P1W9 311 aa20.65■□□□□ 0.9
PACS1-212ENST00000531597 COL5A3P25940 1745 aaPredicted RBP20.64■□□□□ 0.9
PACS1-212ENST00000531597 KCPQ6ZWJ8 1503 aa20.64■□□□□ 0.9
PACS1-212ENST00000531597 ARFGEF1Q9Y6D6 1849 aa20.64■□□□□ 0.89
PACS1-212ENST00000531597 RRAGCQ9HB90 399 aa20.63■□□□□ 0.89
PACS1-212ENST00000531597 DALRD3Q5D0E6 543 aaKnown RBP20.62■□□□□ 0.89
PACS1-212ENST00000531597 RNF181Q9P0P0 153 aa20.62■□□□□ 0.89
PACS1-212ENST00000531597 MYH14Q7Z406 1995 aaKnown RBP20.62■□□□□ 0.89
PACS1-212ENST00000531597 KDM2BQ8NHM5 1336 aa20.61■□□□□ 0.89
PACS1-212ENST00000531597 DDR1Q08345 913 aa20.61■□□□□ 0.89
PACS1-212ENST00000531597 FKBP8Q14318 412 aa20.61■□□□□ 0.89
PACS1-212ENST00000531597 SRP68Q9UHB9 627 aaKnown RBP20.61■□□□□ 0.89
PACS1-212ENST00000531597 KDM6AO15550 1401 aaPredicted RBP20.6■□□□□ 0.89
PACS1-212ENST00000531597 HSP90AB1P08238 724 aaKnown RBP20.59■□□□□ 0.89
PACS1-212ENST00000531597 CHRNA5P30532 468 aa20.59■□□□□ 0.89
PACS1-212ENST00000531597 PCNTO95613 3336 aa20.59■□□□□ 0.89
PACS1-212ENST00000531597 PTCD1O75127 700 aaKnown RBP20.58■□□□□ 0.89
PACS1-212ENST00000531597 CRKLP46109 303 aaKnown RBP20.58■□□□□ 0.89
PACS1-212ENST00000531597 CABP4P57796 275 aa20.58■□□□□ 0.89
PACS1-212ENST00000531597 USP42Q9H9J4 1324 aaKnown RBP20.57■□□□□ 0.88
PACS1-212ENST00000531597 CAPN15O75808 1086 aa20.57■□□□□ 0.88
PACS1-212ENST00000531597 TNNT2P45379 298 aaPredicted RBP20.57■□□□□ 0.88
PACS1-212ENST00000531597 PLEKHO1Q53GL0 409 aaPredicted RBP20.56■□□□□ 0.88
PACS1-212ENST00000531597 ZNF530Q6P9A1 599 aaPredicted RBP20.56■□□□□ 0.88
PACS1-212ENST00000531597 POLRMTO00411 1230 aaKnown RBP20.55■□□□□ 0.88
PACS1-212ENST00000531597 TM4SF1P30408 202 aa20.55■□□□□ 0.88
PACS1-212ENST00000531597 TNS4Q8IZW8 715 aa20.55■□□□□ 0.88
PACS1-212ENST00000531597 SMC1BQ8NDV3 1235 aa20.55■□□□□ 0.88
PACS1-212ENST00000531597 SBF1O95248 1867 aa20.55■□□□□ 0.88
PACS1-212ENST00000531597 INTS5Q6P9B9 1019 aaKnown RBP20.54■□□□□ 0.88
PACS1-212ENST00000531597 TNRC6CQ9HCJ0 1690 aaKnown RBP20.54■□□□□ 0.88
PACS1-212ENST00000531597 MTHFSP49914 203 aa20.53■□□□□ 0.88
PACS1-212ENST00000531597 AMOTQ4VCS5 1084 aa20.53■□□□□ 0.88
PACS1-212ENST00000531597 NFATC2IPQ8NCF5 419 aa20.53■□□□□ 0.88
PACS1-212ENST00000531597 PRELPP51888 382 aa20.52■□□□□ 0.88
PACS1-212ENST00000531597 RASSF7Q02833 373 aa20.52■□□□□ 0.88
PACS1-212ENST00000531597 ADAMTS7Q9UKP4 1686 aa20.51■□□□□ 0.87
PACS1-212ENST00000531597 TJP1Q07157 1748 aa20.5■□□□□ 0.87
PACS1-212ENST00000531597 AEBP1Q8IUX7 1158 aa20.5■□□□□ 0.87
PACS1-212ENST00000531597 USPL1Q5W0Q7 1092 aa20.49■□□□□ 0.87
PACS1-212ENST00000531597 ZC3H4Q9UPT8 1303 aaKnown RBP20.49■□□□□ 0.87
PACS1-212ENST00000531597 GLTPD2A6NH11 291 aa20.48■□□□□ 0.87
PACS1-212ENST00000531597 HSPA1AP0DMV8 641 aaKnown RBP20.47■□□□□ 0.87
PACS1-212ENST00000531597 HSPA1BP0DMV9 641 aaKnown RBP20.47■□□□□ 0.87
PACS1-212ENST00000531597 VEGFAP15692 232 aaPredicted RBP20.47■□□□□ 0.87
PACS1-212ENST00000531597 C1orf141Q5JVX7 400 aa20.47■□□□□ 0.87
PACS1-212ENST00000531597 ZPR1O75312 459 aa20.46■□□□□ 0.87
PACS1-212ENST00000531597 LMNB1P20700 586 aa20.46■□□□□ 0.87
PACS1-212ENST00000531597 DNAJC10Q8IXB1 793 aa20.46■□□□□ 0.87
PACS1-212ENST00000531597 SOS1Q07889 1333 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms