RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 ITPK1Q13572 414 aa27.65■■■□□ 2.02
HIPK3-205ENST00000531504 C10orf71Q711Q0 1435 aa27.65■■■□□ 2.02
HIPK3-205ENST00000531504 NLGN1Q8N2Q7 840 aa27.64■■■□□ 2.02
HIPK3-205ENST00000531504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.64■■■□□ 2.02
HIPK3-205ENST00000531504 ASAP1Q9ULH1 1129 aa27.64■■■□□ 2.02
HIPK3-205ENST00000531504 ANKRD26Q9UPS8 1709 aa27.64■■■□□ 2.01
HIPK3-205ENST00000531504 ARHGAP27Q6ZUM4 889 aa27.63■■■□□ 2.01
HIPK3-205ENST00000531504 RTCBQ9Y3I0 505 aaKnown RBP27.62■■■□□ 2.01
HIPK3-205ENST00000531504 EMILIN1Q9Y6C2 1016 aa27.62■■■□□ 2.01
HIPK3-205ENST00000531504 BRCA1P38398 1863 aaKnown RBP27.61■■■□□ 2.01
HIPK3-205ENST00000531504 A0A0G2JLW4 131 aa27.61■■■□□ 2.01
HIPK3-205ENST00000531504 TRAPPC3LQ5T215 181 aa27.61■■■□□ 2.01
HIPK3-205ENST00000531504 C16orf71Q8IYS4 520 aaPredicted RBP27.61■■■□□ 2.01
HIPK3-205ENST00000531504 RBM46Q8TBY0 533 aaKnown RBP27.61■■■□□ 2.01
HIPK3-205ENST00000531504 NMRK2Q9NPI5 230 aa27.61■■■□□ 2.01
HIPK3-205ENST00000531504 CCDC87Q9NVE4 849 aa27.61■■■□□ 2.01
HIPK3-205ENST00000531504 C4AP0C0L4 1744 aa27.61■■■□□ 2.01
HIPK3-205ENST00000531504 PLEKHG2Q9H7P9 1386 aa27.6■■■□□ 2.01
HIPK3-205ENST00000531504 ZNF831Q5JPB2 1677 aa27.6■■■□□ 2.01
HIPK3-205ENST00000531504 CDCA8Q53HL2 280 aa27.6■■■□□ 2.01
HIPK3-205ENST00000531504 IFNL2Q8IZJ0 200 aa27.6■■■□□ 2.01
HIPK3-205ENST00000531504 ARFGEF1Q9Y6D6 1849 aa27.58■■■□□ 2.01
HIPK3-205ENST00000531504 PPM1GO15355 546 aaPredicted RBP27.58■■■□□ 2.01
HIPK3-205ENST00000531504 FCHSD2O94868 740 aa27.58■■■□□ 2.01
HIPK3-205ENST00000531504 ADRA2BP18089 450 aa27.58■■■□□ 2.01
HIPK3-205ENST00000531504 PHKG2P15735 406 aa27.57■■■□□ 2
HIPK3-205ENST00000531504 ATG3Q9NT62 314 aa27.57■■■□□ 2
HIPK3-205ENST00000531504 KDRP35968 1356 aa27.57■■■□□ 2
HIPK3-205ENST00000531504 COL5A3P25940 1745 aaPredicted RBP27.55■■■□□ 2
HIPK3-205ENST00000531504 DPEP1P16444 411 aa27.55■■■□□ 2
HIPK3-205ENST00000531504 PARP3Q9Y6F1 533 aa27.55■■■□□ 2
HIPK3-205ENST00000531504 WASHC2AQ641Q2 1341 aa27.55■■■□□ 2
HIPK3-205ENST00000531504 FSTL1Q12841 308 aa27.54■■■□□ 2
HIPK3-205ENST00000531504 KLRG1Q96E93 195 aa27.54■■■□□ 2
HIPK3-205ENST00000531504 EYA1Q99502 592 aa27.54■■■□□ 2
HIPK3-205ENST00000531504 KDM2BQ8NHM5 1336 aa27.53■■■□□ 2
HIPK3-205ENST00000531504 RFC4P35249 363 aa27.53■■■□□ 2
HIPK3-205ENST00000531504 RC3H1Q5TC82 1133 aaKnown RBP27.53■■■□□ 2
HIPK3-205ENST00000531504 C9orf131Q5VYM1 1079 aa27.53■■■□□ 2
HIPK3-205ENST00000531504 CNTNAP4Q9C0A0 1308 aa27.51■■□□□ 1.99
HIPK3-205ENST00000531504 ARHGEF1Q92888 912 aaKnown RBP27.51■■□□□ 1.99
HIPK3-205ENST00000531504 TNRC6CQ9HCJ0 1690 aaKnown RBP27.5■■□□□ 1.99
HIPK3-205ENST00000531504 GYS1P13807 737 aa27.5■■□□□ 1.99
HIPK3-205ENST00000531504 JMYQ8N9B5 988 aa27.5■■□□□ 1.99
HIPK3-205ENST00000531504 RBM42Q9BTD8 480 aaKnown RBP27.5■■□□□ 1.99
HIPK3-205ENST00000531504 PIM2Q9P1W9 311 aa27.49■■□□□ 1.99
HIPK3-205ENST00000531504 RPS6KA4O75676 772 aa27.48■■□□□ 1.99
HIPK3-205ENST00000531504 CARD14Q9BXL6 1004 aa27.48■■□□□ 1.99
HIPK3-205ENST00000531504 KCPQ6ZWJ8 1503 aa27.47■■□□□ 1.99
HIPK3-205ENST00000531504 ERVV-2B6SEH9 535 aa27.47■■□□□ 1.99
HIPK3-205ENST00000531504 HSP90AB1P08238 724 aaKnown RBP27.47■■□□□ 1.99
HIPK3-205ENST00000531504 KCNA3P22001 575 aa27.45■■□□□ 1.98
HIPK3-205ENST00000531504 HTRA3P83110 453 aa27.45■■□□□ 1.98
HIPK3-205ENST00000531504 DALRD3Q5D0E6 543 aaKnown RBP27.45■■□□□ 1.98
HIPK3-205ENST00000531504 COL13A1Q5TAT6 717 aaPredicted RBP27.45■■□□□ 1.98
HIPK3-205ENST00000531504 DCAF5Q96JK2 942 aa27.45■■□□□ 1.98
HIPK3-205ENST00000531504 SLC4A9Q96Q91 983 aa27.45■■□□□ 1.98
HIPK3-205ENST00000531504 RNF181Q9P0P0 153 aa27.44■■□□□ 1.98
HIPK3-205ENST00000531504 MYH14Q7Z406 1995 aaKnown RBP27.43■■□□□ 1.98
HIPK3-205ENST00000531504 POLKQ9UBT6 870 aa27.41■■□□□ 1.98
HIPK3-205ENST00000531504 SBF1O95248 1867 aa27.4■■□□□ 1.98
HIPK3-205ENST00000531504 TNS4Q8IZW8 715 aa27.4■■□□□ 1.98
HIPK3-205ENST00000531504 SMC1BQ8NDV3 1235 aa27.4■■□□□ 1.98
HIPK3-205ENST00000531504 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
HIPK3-205ENST00000531504 RRAGCQ9HB90 399 aa27.4■■□□□ 1.98
HIPK3-205ENST00000531504 EIF4A2Q14240 407 aaKnown RBP27.39■■□□□ 1.98
HIPK3-205ENST00000531504 CAPN15O75808 1086 aa27.38■■□□□ 1.97
HIPK3-205ENST00000531504 CABP4P57796 275 aa27.38■■□□□ 1.97
HIPK3-205ENST00000531504 USP42Q9H9J4 1324 aaKnown RBP27.37■■□□□ 1.97
HIPK3-205ENST00000531504 ZC3H4Q9UPT8 1303 aaKnown RBP27.37■■□□□ 1.97
HIPK3-205ENST00000531504 PLEKHO1Q53GL0 409 aaPredicted RBP27.36■■□□□ 1.97
HIPK3-205ENST00000531504 KDM6AO15550 1401 aaPredicted RBP27.35■■□□□ 1.97
HIPK3-205ENST00000531504 CRKLP46109 303 aaKnown RBP27.35■■□□□ 1.97
HIPK3-205ENST00000531504 FKBP8Q14318 412 aa27.34■■□□□ 1.97
HIPK3-205ENST00000531504 ZNF530Q6P9A1 599 aaPredicted RBP27.34■■□□□ 1.97
HIPK3-205ENST00000531504 PTCD1O75127 700 aaKnown RBP27.33■■□□□ 1.97
HIPK3-205ENST00000531504 PRELPP51888 382 aa27.33■■□□□ 1.97
HIPK3-205ENST00000531504 DDR1Q08345 913 aa27.33■■□□□ 1.97
HIPK3-205ENST00000531504 AMOTQ4VCS5 1084 aa27.33■■□□□ 1.97
HIPK3-205ENST00000531504 SRP68Q9UHB9 627 aaKnown RBP27.33■■□□□ 1.97
HIPK3-205ENST00000531504 CHRNA5P30532 468 aa27.32■■□□□ 1.96
HIPK3-205ENST00000531504 TJP1Q07157 1748 aa27.32■■□□□ 1.96
HIPK3-205ENST00000531504 MTHFSP49914 203 aa27.3■■□□□ 1.96
HIPK3-205ENST00000531504 C1orf141Q5JVX7 400 aa27.3■■□□□ 1.96
HIPK3-205ENST00000531504 PCNTO95613 3336 aa27.29■■□□□ 1.96
HIPK3-205ENST00000531504 TNNT2P45379 298 aaPredicted RBP27.29■■□□□ 1.96
HIPK3-205ENST00000531504 POLRMTO00411 1230 aaKnown RBP27.28■■□□□ 1.96
HIPK3-205ENST00000531504 ADAMTS7Q9UKP4 1686 aa27.27■■□□□ 1.96
HIPK3-205ENST00000531504 ZPR1O75312 459 aa27.26■■□□□ 1.95
HIPK3-205ENST00000531504 VEGFAP15692 232 aaPredicted RBP27.26■■□□□ 1.95
HIPK3-205ENST00000531504 LMNB1P20700 586 aa27.26■■□□□ 1.95
HIPK3-205ENST00000531504 TIAM2Q8IVF5 1701 aa27.26■■□□□ 1.95
HIPK3-205ENST00000531504 DLEC1Q9Y238 1755 aa27.25■■□□□ 1.95
HIPK3-205ENST00000531504 TM4SF1P30408 202 aa27.25■■□□□ 1.95
HIPK3-205ENST00000531504 NFATC2IPQ8NCF5 419 aa27.25■■□□□ 1.95
HIPK3-205ENST00000531504 GLTPD2A6NH11 291 aa27.24■■□□□ 1.95
HIPK3-205ENST00000531504 RASSF7Q02833 373 aa27.24■■□□□ 1.95
HIPK3-205ENST00000531504 AFDNP55196 1824 aaKnown RBP27.23■■□□□ 1.95
HIPK3-205ENST00000531504 HSPA1AP0DMV8 641 aaKnown RBP27.23■■□□□ 1.95
HIPK3-205ENST00000531504 HSPA1BP0DMV9 641 aaKnown RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms