RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 SLC4A3P48751 1232 aa10.31□□□□□ -0.76
TRIM53CP-201ENST00000531490 APLP1P51693 650 aa10.31□□□□□ -0.76
TRIM53CP-201ENST00000531490 R3HDM1Q15032 1099 aaKnown RBP10.31□□□□□ -0.76
TRIM53CP-201ENST00000531490 RGL3Q3MIN7 710 aa10.31□□□□□ -0.76
TRIM53CP-201ENST00000531490 LRPPRCP42704 1394 aaKnown RBP10.31□□□□□ -0.76
TRIM53CP-201ENST00000531490 RPGRIP1LQ68CZ1 1315 aa10.31□□□□□ -0.76
TRIM53CP-201ENST00000531490 MINK1Q8N4C8 1332 aaPredicted RBP10.31□□□□□ -0.76
TRIM53CP-201ENST00000531490 FAM83GA6ND36 823 aa10.3□□□□□ -0.76
TRIM53CP-201ENST00000531490 NECTIN2Q92692 538 aa10.3□□□□□ -0.76
TRIM53CP-201ENST00000531490 ITGBL1O95965 494 aaPredicted RBP10.29□□□□□ -0.76
TRIM53CP-201ENST00000531490 CDC42BPGQ6DT37 1551 aa10.29□□□□□ -0.76
TRIM53CP-201ENST00000531490 KIF1BO60333 1816 aa10.29□□□□□ -0.76
TRIM53CP-201ENST00000531490 ZMYND10O75800 440 aa10.28□□□□□ -0.76
TRIM53CP-201ENST00000531490 BAG6P46379 1132 aa10.28□□□□□ -0.76
TRIM53CP-201ENST00000531490 SLC10A3P09131 477 aa10.27□□□□□ -0.76
TRIM53CP-201ENST00000531490 SAFB2Q14151 953 aaKnown RBP eCLIP10.27□□□□□ -0.76
TRIM53CP-201ENST00000531490 IFFO2Q5TF58 517 aa10.27□□□□□ -0.76
TRIM53CP-201ENST00000531490 BARGINQ6ZT62 677 aa10.27□□□□□ -0.76
TRIM53CP-201ENST00000531490 CCDC102AQ96A19 550 aa10.27□□□□□ -0.76
TRIM53CP-201ENST00000531490 DAXXQ9UER7 740 aaPredicted RBP10.27□□□□□ -0.76
TRIM53CP-201ENST00000531490 ABCC11Q96J66 1382 aa10.27□□□□□ -0.77
TRIM53CP-201ENST00000531490 PMFBP1Q8TBY8 1022 aa10.26□□□□□ -0.77
TRIM53CP-201ENST00000531490 BTG4Q9NY30 223 aa10.26□□□□□ -0.77
TRIM53CP-201ENST00000531490 CCDC144AA2RUR9 1427 aa10.26□□□□□ -0.77
TRIM53CP-201ENST00000531490 TNS3Q68CZ2 1445 aa10.26□□□□□ -0.77
TRIM53CP-201ENST00000531490 EZH2Q15910 746 aaKnown RBP10.26□□□□□ -0.77
TRIM53CP-201ENST00000531490 TECPR2O15040 1411 aa10.25□□□□□ -0.77
TRIM53CP-201ENST00000531490 LRP5O75197 1615 aa10.25□□□□□ -0.77
TRIM53CP-201ENST00000531490 USP32Q8NFA0 1604 aa10.25□□□□□ -0.77
TRIM53CP-201ENST00000531490 PSME1Q06323 249 aa10.25□□□□□ -0.77
TRIM53CP-201ENST00000531490 TJAP1Q5JTD0 557 aa10.25□□□□□ -0.77
TRIM53CP-201ENST00000531490 BRWD3Q6RI45 1802 aa10.24□□□□□ -0.77
TRIM53CP-201ENST00000531490 KCNC4Q03721 635 aa10.24□□□□□ -0.77
TRIM53CP-201ENST00000531490 KRI1Q8N9T8 703 aaKnown RBP10.24□□□□□ -0.77
TRIM53CP-201ENST00000531490 MTRQ99707 1265 aa10.24□□□□□ -0.77
TRIM53CP-201ENST00000531490 ACIN1Q9UKV3 1341 aaKnown RBP10.23□□□□□ -0.77
TRIM53CP-201ENST00000531490 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.23□□□□□ -0.77
TRIM53CP-201ENST00000531490 YTHDC2Q9H6S0 1430 aaKnown RBP10.23□□□□□ -0.77
TRIM53CP-201ENST00000531490 CFHP08603 1231 aa10.23□□□□□ -0.77
TRIM53CP-201ENST00000531490 PRAM1Q96QH2 718 aa10.23□□□□□ -0.77
TRIM53CP-201ENST00000531490 MARF1Q9Y4F3 1742 aaKnown RBP10.23□□□□□ -0.77
TRIM53CP-201ENST00000531490 SBNO1A3KN83 1393 aa10.22□□□□□ -0.77
TRIM53CP-201ENST00000531490 ANKRD30BQ9BXX2 1392 aa10.22□□□□□ -0.77
TRIM53CP-201ENST00000531490 TRIM37O94972 964 aa10.22□□□□□ -0.77
TRIM53CP-201ENST00000531490 YY1P25490 414 aa10.22□□□□□ -0.77
TRIM53CP-201ENST00000531490 CFAP70Q5T0N1 1121 aa10.22□□□□□ -0.77
TRIM53CP-201ENST00000531490 PRR14Q9BWN1 585 aa10.22□□□□□ -0.77
TRIM53CP-201ENST00000531490 SPATA31A5Q5VU36 1347 aa10.22□□□□□ -0.77
TRIM53CP-201ENST00000531490 SPATA31A7Q8IWB4 1347 aa10.22□□□□□ -0.77
TRIM53CP-201ENST00000531490 SPATA31E1Q6ZUB1 1445 aa10.21□□□□□ -0.77
TRIM53CP-201ENST00000531490 DDX11L8A8MPP1 907 aa10.21□□□□□ -0.78
TRIM53CP-201ENST00000531490 CAMKK2Q96RR4 588 aa10.21□□□□□ -0.78
TRIM53CP-201ENST00000531490 HIRIP3Q9BW71 556 aaPredicted RBP10.21□□□□□ -0.78
TRIM53CP-201ENST00000531490 ARHGEF10O15013 1369 aa10.21□□□□□ -0.78
TRIM53CP-201ENST00000531490 PPLO60437 1756 aa10.2□□□□□ -0.78
TRIM53CP-201ENST00000531490 ACTN4O43707 911 aaKnown RBP10.2□□□□□ -0.78
TRIM53CP-201ENST00000531490 MDM2Q00987 491 aaPredicted RBP10.2□□□□□ -0.78
TRIM53CP-201ENST00000531490 KMT5BQ4FZB7 885 aa10.2□□□□□ -0.78
TRIM53CP-201ENST00000531490 C14orf93Q9H972 538 aaKnown RBP10.2□□□□□ -0.78
TRIM53CP-201ENST00000531490 IL21Q9HBE4 155 aa10.2□□□□□ -0.78
TRIM53CP-201ENST00000531490 PIK3C2GO75747 1445 aa10.2□□□□□ -0.78
TRIM53CP-201ENST00000531490 NRXN1Q9ULB1 1477 aa10.2□□□□□ -0.78
TRIM53CP-201ENST00000531490 APBA3O96018 575 aa10.19□□□□□ -0.78
TRIM53CP-201ENST00000531490 COPS2P61201 443 aa10.19□□□□□ -0.78
TRIM53CP-201ENST00000531490 CHRNA2Q15822 529 aa10.19□□□□□ -0.78
TRIM53CP-201ENST00000531490 RDH13Q8NBN7 331 aa10.19□□□□□ -0.78
TRIM53CP-201ENST00000531490 ZNF516Q92618 1163 aa10.19□□□□□ -0.78
TRIM53CP-201ENST00000531490 SIRT1Q96EB6 747 aa10.19□□□□□ -0.78
TRIM53CP-201ENST00000531490 TRIM26Q12899 539 aaPredicted RBP10.18□□□□□ -0.78
TRIM53CP-201ENST00000531490 SULF1Q8IWU6 871 aa10.18□□□□□ -0.78
TRIM53CP-201ENST00000531490 PRDM11Q9NQV5 511 aa10.18□□□□□ -0.78
TRIM53CP-201ENST00000531490 USP35Q9P2H5 1018 aa10.18□□□□□ -0.78
TRIM53CP-201ENST00000531490 PCDHB3Q9Y5E6 796 aa10.18□□□□□ -0.78
TRIM53CP-201ENST00000531490 PRR36Q9H6K5 1346 aa10.18□□□□□ -0.78
TRIM53CP-201ENST00000531490 PLCH1Q4KWH8 1693 aa10.18□□□□□ -0.78
TRIM53CP-201ENST00000531490 FMN2Q9NZ56 1722 aa10.18□□□□□ -0.78
TRIM53CP-201ENST00000531490 UTRNP46939 3433 aa10.17□□□□□ -0.78
TRIM53CP-201ENST00000531490 STRN4Q9NRL3 753 aa10.17□□□□□ -0.78
TRIM53CP-201ENST00000531490 POGKQ9P215 609 aa10.17□□□□□ -0.78
TRIM53CP-201ENST00000531490 DISP2A7MBM2 1401 aa10.17□□□□□ -0.78
TRIM53CP-201ENST00000531490 KIF1AQ12756 1690 aa10.16□□□□□ -0.78
TRIM53CP-201ENST00000531490 NUTM2GQ5VZR2 741 aa10.16□□□□□ -0.78
TRIM53CP-201ENST00000531490 BLOC1S3Q6QNY0 202 aa10.16□□□□□ -0.78
TRIM53CP-201ENST00000531490 IFT172Q9UG01 1749 aa10.16□□□□□ -0.78
TRIM53CP-201ENST00000531490 DHX57Q6P158 1386 aaKnown RBP10.15□□□□□ -0.78
TRIM53CP-201ENST00000531490 KIAA0232Q92628 1395 aa10.15□□□□□ -0.78
TRIM53CP-201ENST00000531490 SPATA31A1Q5TZJ5 1347 aa10.15□□□□□ -0.78
TRIM53CP-201ENST00000531490 ZC3H6P61129 1189 aaKnown RBP10.15□□□□□ -0.78
TRIM53CP-201ENST00000531490 FAM196AQ6ZSG2 479 aa10.15□□□□□ -0.78
TRIM53CP-201ENST00000531490 DCAF11Q8TEB1 546 aa10.15□□□□□ -0.78
TRIM53CP-201ENST00000531490 TMUB1Q9BVT8 246 aa10.15□□□□□ -0.78
TRIM53CP-201ENST00000531490 GPRASP1Q5JY77 1395 aa10.15□□□□□ -0.79
TRIM53CP-201ENST00000531490 GCGRP47871 477 aa10.14□□□□□ -0.79
TRIM53CP-201ENST00000531490 NGDNQ8NEJ9 315 aaKnown RBP10.14□□□□□ -0.79
TRIM53CP-201ENST00000531490 SIN3AQ96ST3 1273 aa10.14□□□□□ -0.79
TRIM53CP-201ENST00000531490 GPCPD1Q9NPB8 672 aa10.14□□□□□ -0.79
TRIM53CP-201ENST00000531490 TRAK1Q9UPV9 953 aa10.14□□□□□ -0.79
TRIM53CP-201ENST00000531490 NWD2Q9ULI1 1742 aa10.14□□□□□ -0.79
TRIM53CP-201ENST00000531490 NRAPQ86VF7 1730 aa10.14□□□□□ -0.79
TRIM53CP-201ENST00000531490 ZPR1O75312 459 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms