RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 EIF4G2P78344 907 aaKnown RBP eCLIP25.36■■□□□ 1.65
SSSCA1-206ENST00000531405 IGSF1Q8N6C5 1336 aa25.36■■□□□ 1.65
SSSCA1-206ENST00000531405 ZNF831Q5JPB2 1677 aa25.36■■□□□ 1.65
SSSCA1-206ENST00000531405 GNPATO15228 680 aa25.35■■□□□ 1.65
SSSCA1-206ENST00000531405 WWC3Q9ULE0 1092 aa25.35■■□□□ 1.65
SSSCA1-206ENST00000531405 CEP350Q5VT06 3117 aa25.35■■□□□ 1.65
SSSCA1-206ENST00000531405 MYH14Q7Z406 1995 aaKnown RBP25.33■■□□□ 1.65
SSSCA1-206ENST00000531405 KIF13BQ9NQT8 1826 aa25.33■■□□□ 1.64
SSSCA1-206ENST00000531405 KDRP35968 1356 aa25.32■■□□□ 1.64
SSSCA1-206ENST00000531405 N4BP2Q86UW6 1770 aaPredicted RBP25.32■■□□□ 1.64
SSSCA1-206ENST00000531405 VIRMAQ69YN4 1812 aaKnown RBP25.32■■□□□ 1.64
SSSCA1-206ENST00000531405 C4AP0C0L4 1744 aa25.31■■□□□ 1.64
SSSCA1-206ENST00000531405 KIAA1551Q9HCM1 1747 aa25.31■■□□□ 1.64
SSSCA1-206ENST00000531405 PLEKHG2Q9H7P9 1386 aa25.31■■□□□ 1.64
SSSCA1-206ENST00000531405 KDM6AO15550 1401 aaPredicted RBP25.3■■□□□ 1.64
SSSCA1-206ENST00000531405 ATP10DQ9P241 1426 aa25.3■■□□□ 1.64
SSSCA1-206ENST00000531405 SLC4A9Q96Q91 983 aa25.3■■□□□ 1.64
SSSCA1-206ENST00000531405 ERVV-2B6SEH9 535 aa25.28■■□□□ 1.64
SSSCA1-206ENST00000531405 RBM42Q9BTD8 480 aaKnown RBP25.28■■□□□ 1.64
SSSCA1-206ENST00000531405 SCN11AQ9UI33 1791 aa25.28■■□□□ 1.64
SSSCA1-206ENST00000531405 CICQ96RK0 1608 aaPredicted RBP25.27■■□□□ 1.64
SSSCA1-206ENST00000531405 PLEKHO1Q53GL0 409 aaPredicted RBP25.27■■□□□ 1.64
SSSCA1-206ENST00000531405 ZNF530Q6P9A1 599 aaPredicted RBP25.27■■□□□ 1.64
SSSCA1-206ENST00000531405 AEBP1Q8IUX7 1158 aa25.27■■□□□ 1.64
SSSCA1-206ENST00000531405 DCAF5Q96JK2 942 aa25.27■■□□□ 1.64
SSSCA1-206ENST00000531405 MORC1Q86VD1 984 aa25.26■■□□□ 1.63
SSSCA1-206ENST00000531405 HSP90AB1P08238 724 aaKnown RBP25.25■■□□□ 1.63
SSSCA1-206ENST00000531405 MMP10P09238 476 aa25.25■■□□□ 1.63
SSSCA1-206ENST00000531405 ADCY9O60503 1353 aa25.24■■□□□ 1.63
SSSCA1-206ENST00000531405 RTCBQ9Y3I0 505 aaKnown RBP25.24■■□□□ 1.63
SSSCA1-206ENST00000531405 TJP1Q07157 1748 aa25.23■■□□□ 1.63
SSSCA1-206ENST00000531405 BRCA1P38398 1863 aaKnown RBP25.22■■□□□ 1.63
SSSCA1-206ENST00000531405 CABP4P57796 275 aa25.22■■□□□ 1.63
SSSCA1-206ENST00000531405 AMOTQ4VCS5 1084 aa25.22■■□□□ 1.63
SSSCA1-206ENST00000531405 TRAPPC3LQ5T215 181 aa25.22■■□□□ 1.63
SSSCA1-206ENST00000531405 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
SSSCA1-206ENST00000531405 ZNF526Q8TF50 670 aaPredicted RBP25.21■■□□□ 1.63
SSSCA1-206ENST00000531405 PXDNLA1KZ92 1463 aa25.21■■□□□ 1.63
SSSCA1-206ENST00000531405 MTHFSP49914 203 aa25.2■■□□□ 1.62
SSSCA1-206ENST00000531405 SULT6B1Q6IMI4 303 aa25.2■■□□□ 1.62
SSSCA1-206ENST00000531405 CNTNAP4Q9C0A0 1308 aa25.19■■□□□ 1.62
SSSCA1-206ENST00000531405 C1orf141Q5JVX7 400 aa25.19■■□□□ 1.62
SSSCA1-206ENST00000531405 ARHGEF1Q92888 912 aaKnown RBP25.19■■□□□ 1.62
SSSCA1-206ENST00000531405 GPBP1L1Q9HC44 474 aaPredicted RBP25.19■■□□□ 1.62
SSSCA1-206ENST00000531405 KNSTRNQ9Y448 316 aa25.19■■□□□ 1.62
SSSCA1-206ENST00000531405 PTCD1O75127 700 aaKnown RBP25.18■■□□□ 1.62
SSSCA1-206ENST00000531405 RC3H1Q5TC82 1133 aaKnown RBP25.18■■□□□ 1.62
SSSCA1-206ENST00000531405 NFATC2IPQ8NCF5 419 aa25.17■■□□□ 1.62
SSSCA1-206ENST00000531405 C10orf71Q711Q0 1435 aa25.17■■□□□ 1.62
SSSCA1-206ENST00000531405 RPS6KA4O75676 772 aa25.16■■□□□ 1.62
SSSCA1-206ENST00000531405 IL13P35225 146 aa25.16■■□□□ 1.62
SSSCA1-206ENST00000531405 NLGN1Q8N2Q7 840 aa25.16■■□□□ 1.62
SSSCA1-206ENST00000531405 GYS1P13807 737 aa25.15■■□□□ 1.62
SSSCA1-206ENST00000531405 ADRA2BP18089 450 aa25.15■■□□□ 1.62
SSSCA1-206ENST00000531405 RFC4P35249 363 aa25.15■■□□□ 1.62
SSSCA1-206ENST00000531405 A0A0G2JLW4 131 aa25.14■■□□□ 1.62
SSSCA1-206ENST00000531405 ARFGEF1Q9Y6D6 1849 aa25.14■■□□□ 1.61
SSSCA1-206ENST00000531405 ADAMTS7Q9UKP4 1686 aa25.13■■□□□ 1.61
SSSCA1-206ENST00000531405 AMER1Q5JTC6 1135 aaPredicted RBP25.13■■□□□ 1.61
SSSCA1-206ENST00000531405 CRKLP46109 303 aaKnown RBP25.12■■□□□ 1.61
SSSCA1-206ENST00000531405 BCS1LQ9Y276 419 aa25.11■■□□□ 1.61
SSSCA1-206ENST00000531405 KIF7Q2M1P5 1343 aa25.11■■□□□ 1.61
SSSCA1-206ENST00000531405 TGFB2P61812 414 aa25.1■■□□□ 1.61
SSSCA1-206ENST00000531405 CCDC87Q9NVE4 849 aa25.1■■□□□ 1.61
SSSCA1-206ENST00000531405 SRP68Q9UHB9 627 aaKnown RBP25.1■■□□□ 1.61
SSSCA1-206ENST00000531405 PARP3Q9Y6F1 533 aa25.1■■□□□ 1.61
SSSCA1-206ENST00000531405 DPEP1P16444 411 aa25.09■■□□□ 1.61
SSSCA1-206ENST00000531405 HMOX1P09601 288 aa25.07■■□□□ 1.6
SSSCA1-206ENST00000531405 AKAP4Q5JQC9 854 aa25.07■■□□□ 1.6
SSSCA1-206ENST00000531405 LGR6Q9HBX8 967 aa25.07■■□□□ 1.6
SSSCA1-206ENST00000531405 MRC1P22897 1456 aa25.07■■□□□ 1.6
SSSCA1-206ENST00000531405 AFDNP55196 1824 aaKnown RBP25.07■■□□□ 1.6
SSSCA1-206ENST00000531405 USP42Q9H9J4 1324 aaKnown RBP25.06■■□□□ 1.6
SSSCA1-206ENST00000531405 FKBP8Q14318 412 aa25.05■■□□□ 1.6
SSSCA1-206ENST00000531405 UBR2Q8IWV8 1755 aa25.04■■□□□ 1.6
SSSCA1-206ENST00000531405 INTS5Q6P9B9 1019 aaKnown RBP25.04■■□□□ 1.6
SSSCA1-206ENST00000531405 DNAJC10Q8IXB1 793 aa25.04■■□□□ 1.6
SSSCA1-206ENST00000531405 SLC52A2Q9HAB3 445 aa25.04■■□□□ 1.6
SSSCA1-206ENST00000531405 KCPQ6ZWJ8 1503 aa25.03■■□□□ 1.6
SSSCA1-206ENST00000531405 FCHSD2O94868 740 aa25.03■■□□□ 1.6
SSSCA1-206ENST00000531405 DDR1Q08345 913 aa25.03■■□□□ 1.6
SSSCA1-206ENST00000531405 ARHGAP27Q6ZUM4 889 aa25.03■■□□□ 1.6
SSSCA1-206ENST00000531405 KIF3CO14782 793 aa25.02■■□□□ 1.6
SSSCA1-206ENST00000531405 KCNA3P22001 575 aa25.02■■□□□ 1.6
SSSCA1-206ENST00000531405 SLC39A6Q13433 755 aa25.02■■□□□ 1.6
SSSCA1-206ENST00000531405 CC2D1BQ5T0F9 858 aaKnown RBP25.02■■□□□ 1.6
SSSCA1-206ENST00000531405 SBF1O95248 1867 aa25.02■■□□□ 1.6
SSSCA1-206ENST00000531405 RNMTO43148 476 aaKnown RBP25.01■■□□□ 1.59
SSSCA1-206ENST00000531405 PER1O15534 1290 aaPredicted RBP25■■□□□ 1.59
SSSCA1-206ENST00000531405 HSPA6P17066 643 aa25■■□□□ 1.59
SSSCA1-206ENST00000531405 MTHFSDQ2M296 383 aaKnown RBP24.99■■□□□ 1.59
SSSCA1-206ENST00000531405 SIPA1L3O60292 1781 aaPredicted RBP24.98■■□□□ 1.59
SSSCA1-206ENST00000531405 SOS1Q07889 1333 aaPredicted RBP24.97■■□□□ 1.59
SSSCA1-206ENST00000531405 DIAPH1O60610 1272 aaKnown RBP24.97■■□□□ 1.59
SSSCA1-206ENST00000531405 CYP19A1P11511 503 aaPredicted RBP24.97■■□□□ 1.59
SSSCA1-206ENST00000531405 USPL1Q5W0Q7 1092 aa24.97■■□□□ 1.59
SSSCA1-206ENST00000531405 NRXN2Q9P2S2 1712 aa24.97■■□□□ 1.59
SSSCA1-206ENST00000531405 COL3A1P02461 1466 aaPredicted RBP24.96■■□□□ 1.59
SSSCA1-206ENST00000531405 DLEC1Q9Y238 1755 aa24.96■■□□□ 1.59
SSSCA1-206ENST00000531405 POLRMTO00411 1230 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms