RNA–Protein interactions for RNA: ENST00000531298.5

PACS1-211, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-211ENST00000531298 PXDNQ92626 1479 aa9.5□□□□□ -0.89
PACS1-211ENST00000531298 SIPA1L3O60292 1781 aaPredicted RBP9.5□□□□□ -0.89
PACS1-211ENST00000531298 FOXO3O43524 673 aa9.49□□□□□ -0.89
PACS1-211ENST00000531298 NUCB1Q02818 461 aa9.49□□□□□ -0.89
PACS1-211ENST00000531298 ORAI2Q96SN7 254 aa9.49□□□□□ -0.89
PACS1-211ENST00000531298 PDZRN3Q9UPQ7 1066 aa9.49□□□□□ -0.89
PACS1-211ENST00000531298 HEG1Q9ULI3 1381 aa9.49□□□□□ -0.89
PACS1-211ENST00000531298 MCM10Q7L590 875 aa9.48□□□□□ -0.89
PACS1-211ENST00000531298 IL17REQ8NFR9 667 aa9.48□□□□□ -0.89
PACS1-211ENST00000531298 STK31Q9BXU1 1019 aa9.48□□□□□ -0.89
PACS1-211ENST00000531298 NOP58Q9Y2X3 529 aaKnown RBP9.48□□□□□ -0.89
PACS1-211ENST00000531298 ERBB3P21860 1342 aa9.48□□□□□ -0.89
PACS1-211ENST00000531298 SPATA31A3Q5VYP0 1347 aa9.48□□□□□ -0.89
PACS1-211ENST00000531298 PKD1L3Q7Z443 1732 aa9.48□□□□□ -0.89
PACS1-211ENST00000531298 PARP4Q9UKK3 1724 aaKnown RBP9.48□□□□□ -0.89
PACS1-211ENST00000531298 DCTN1Q14203 1278 aa9.47□□□□□ -0.89
PACS1-211ENST00000531298 NBPF6Q5VWK0 638 aa9.47□□□□□ -0.89
PACS1-211ENST00000531298 ANKRD44Q8N8A2 993 aa9.47□□□□□ -0.89
PACS1-211ENST00000531298 IL27Q8NEV9 243 aa9.47□□□□□ -0.89
PACS1-211ENST00000531298 NBPF4Q96M43 638 aa9.47□□□□□ -0.89
PACS1-211ENST00000531298 DCTPP1Q9H773 170 aa9.47□□□□□ -0.89
PACS1-211ENST00000531298 ZBTB47Q9UFB7 747 aaPredicted RBP9.47□□□□□ -0.89
PACS1-211ENST00000531298 TNNQ9UQP3 1299 aa9.47□□□□□ -0.89
PACS1-211ENST00000531298 RGPD2P0DJD1 1756 aa9.47□□□□□ -0.89
PACS1-211ENST00000531298 SCN11AQ9UI33 1791 aa9.46□□□□□ -0.9
PACS1-211ENST00000531298 HMMRO75330 724 aa9.46□□□□□ -0.9
PACS1-211ENST00000531298 BMP2KLQ5H9B9 411 aa9.46□□□□□ -0.9
PACS1-211ENST00000531298 CHD1LQ86WJ1 897 aa9.46□□□□□ -0.9
PACS1-211ENST00000531298 UPF2Q9HAU5 1272 aaKnown RBP9.46□□□□□ -0.9
PACS1-211ENST00000531298 HDAC5Q9UQL6 1122 aa9.46□□□□□ -0.9
PACS1-211ENST00000531298 SOS2Q07890 1332 aaPredicted RBP9.46□□□□□ -0.9
PACS1-211ENST00000531298 MRC1P22897 1456 aa9.46□□□□□ -0.9
PACS1-211ENST00000531298 HSP90AB1P08238 724 aaKnown RBP9.45□□□□□ -0.9
PACS1-211ENST00000531298 GNAI3P08754 354 aa9.45□□□□□ -0.9
PACS1-211ENST00000531298 ANKRD24Q8TF21 1146 aa9.45□□□□□ -0.9
PACS1-211ENST00000531298 ATP10DQ9P241 1426 aa9.45□□□□□ -0.9
PACS1-211ENST00000531298 NHSL1Q5SYE7 1610 aa9.45□□□□□ -0.9
PACS1-211ENST00000531298 SOX12O15370 315 aa9.44□□□□□ -0.9
PACS1-211ENST00000531298 RGS3P49796 1198 aa9.44□□□□□ -0.9
PACS1-211ENST00000531298 C1orf141Q5JVX7 400 aa9.44□□□□□ -0.9
PACS1-211ENST00000531298 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
PACS1-211ENST00000531298 RGPD5Q99666 1765 aa9.44□□□□□ -0.9
PACS1-211ENST00000531298 RNMTO43148 476 aaKnown RBP9.43□□□□□ -0.9
PACS1-211ENST00000531298 EIF4A1P60842 406 aaKnown RBP9.43□□□□□ -0.9
PACS1-211ENST00000531298 TEFQ10587 303 aa9.43□□□□□ -0.9
PACS1-211ENST00000531298 NUTM2GQ5VZR2 741 aa9.43□□□□□ -0.9
PACS1-211ENST00000531298 USP35Q9P2H5 1018 aa9.43□□□□□ -0.9
PACS1-211ENST00000531298 SPG7Q9UQ90 795 aa9.43□□□□□ -0.9
PACS1-211ENST00000531298 ELL2O00472 640 aaPredicted RBP9.42□□□□□ -0.9
PACS1-211ENST00000531298 FLIIQ13045 1269 aa9.42□□□□□ -0.9
PACS1-211ENST00000531298 ZNF530Q6P9A1 599 aaPredicted RBP9.42□□□□□ -0.9
PACS1-211ENST00000531298 KDM4FA0A1W2PPD8 638 aa9.41□□□□□ -0.9
PACS1-211ENST00000531298 CEP85Q6P2H3 762 aa9.41□□□□□ -0.9
PACS1-211ENST00000531298 BRINP3Q76B58 766 aa9.41□□□□□ -0.9
PACS1-211ENST00000531298 SIRT2Q8IXJ6 389 aa9.41□□□□□ -0.9
PACS1-211ENST00000531298 RAPGEF4Q8WZA2 1011 aa9.41□□□□□ -0.9
PACS1-211ENST00000531298 OSBPL3Q9H4L5 887 aa9.41□□□□□ -0.9
PACS1-211ENST00000531298 ABCA3Q99758 1704 aa9.41□□□□□ -0.9
PACS1-211ENST00000531298 ERBB4Q15303 1308 aa9.4□□□□□ -0.9
PACS1-211ENST00000531298 EPB41L2O43491 1005 aaKnown RBP9.4□□□□□ -0.9
PACS1-211ENST00000531298 GNAI2P04899 355 aa9.4□□□□□ -0.9
PACS1-211ENST00000531298 TATP17735 454 aaPredicted RBP9.4□□□□□ -0.9
PACS1-211ENST00000531298 BECN1Q14457 450 aa9.4□□□□□ -0.9
PACS1-211ENST00000531298 HDGFL1Q5TGJ6 251 aa9.4□□□□□ -0.9
PACS1-211ENST00000531298 IFNL2Q8IZJ0 200 aa9.4□□□□□ -0.9
PACS1-211ENST00000531298 TBC1D32Q96NH3 1257 aa9.4□□□□□ -0.9
PACS1-211ENST00000531298 SLAIN2Q9P270 581 aa9.4□□□□□ -0.9
PACS1-211ENST00000531298 DBF4Q9UBU7 674 aaPredicted RBP9.4□□□□□ -0.9
PACS1-211ENST00000531298 BTBD11A6QL63 1104 aa9.39□□□□□ -0.91
PACS1-211ENST00000531298 ALDH1L1O75891 902 aa9.39□□□□□ -0.91
PACS1-211ENST00000531298 RBM25P49756 843 aaKnown RBP9.39□□□□□ -0.91
PACS1-211ENST00000531298 FXR2P51116 673 aaKnown RBP eCLIP9.39□□□□□ -0.91
PACS1-211ENST00000531298 EVX2Q03828 476 aa9.39□□□□□ -0.91
PACS1-211ENST00000531298 LTV1Q96GA3 475 aaPredicted RBP9.39□□□□□ -0.91
PACS1-211ENST00000531298 DCAF5Q96JK2 942 aa9.39□□□□□ -0.91
PACS1-211ENST00000531298 HYPKQ9NX55 129 aa9.39□□□□□ -0.91
PACS1-211ENST00000531298 AXIN2Q9Y2T1 843 aa9.39□□□□□ -0.91
PACS1-211ENST00000531298 COL15A1P39059 1388 aa9.38□□□□□ -0.91
PACS1-211ENST00000531298 COL22A1Q8NFW1 1626 aaPredicted RBP9.38□□□□□ -0.91
PACS1-211ENST00000531298 AOX1Q06278 1338 aa9.38□□□□□ -0.91
PACS1-211ENST00000531298 WDR17Q8IZU2 1322 aa9.38□□□□□ -0.91
PACS1-211ENST00000531298 PITPNM1O00562 1244 aa9.38□□□□□ -0.91
PACS1-211ENST00000531298 GIGYF1O75420 1035 aaPredicted RBP9.38□□□□□ -0.91
PACS1-211ENST00000531298 ATP8B2P98198 1209 aa9.38□□□□□ -0.91
PACS1-211ENST00000531298 MTX1Q13505 466 aa9.38□□□□□ -0.91
PACS1-211ENST00000531298 NKX1-1Q15270 411 aaPredicted RBP9.38□□□□□ -0.91
PACS1-211ENST00000531298 KRT24Q2M2I5 525 aa9.38□□□□□ -0.91
PACS1-211ENST00000531298 RBM33Q96EV2 1170 aaKnown RBP9.38□□□□□ -0.91
PACS1-211ENST00000531298 SRCIN1Q9C0H9 1055 aa9.38□□□□□ -0.91
PACS1-211ENST00000531298 AHDC1Q5TGY3 1603 aaPredicted RBP9.38□□□□□ -0.91
PACS1-211ENST00000531298 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
PACS1-211ENST00000531298 RAB11FIP3O75154 756 aa9.37□□□□□ -0.91
PACS1-211ENST00000531298 PHKG2P15735 406 aa9.37□□□□□ -0.91
PACS1-211ENST00000531298 FKBP5Q13451 457 aaPredicted RBP9.37□□□□□ -0.91
PACS1-211ENST00000531298 HSP90AB4PQ58FF6 505 aa9.37□□□□□ -0.91
PACS1-211ENST00000531298 ANKRD45Q5TZF3 282 aa9.37□□□□□ -0.91
PACS1-211ENST00000531298 LRRC59Q96AG4 307 aaKnown RBP9.37□□□□□ -0.91
PACS1-211ENST00000531298 SLC52A2Q9HAB3 445 aa9.37□□□□□ -0.91
PACS1-211ENST00000531298 DDX21Q9NR30 783 aaKnown RBP eCLIP9.37□□□□□ -0.91
PACS1-211ENST00000531298 DAXXQ9UER7 740 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms