RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 GAS2L2Q8NHY3 880 aa14.7□□□□□ -0.06
CAPN1-221ENST00000531068 KAT6BQ8WYB5 2073 aa14.7□□□□□ -0.06
CAPN1-221ENST00000531068 PAPPAQ13219 1627 aa14.7□□□□□ -0.06
CAPN1-221ENST00000531068 PKD1L3Q7Z443 1732 aa14.69□□□□□ -0.06
CAPN1-221ENST00000531068 DOT1LQ8TEK3 1739 aa14.69□□□□□ -0.06
CAPN1-221ENST00000531068 SHANK3Q9BYB0 1731 aa14.69□□□□□ -0.06
CAPN1-221ENST00000531068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.69□□□□□ -0.06
CAPN1-221ENST00000531068 RNMTO43148 476 aaKnown RBP14.69□□□□□ -0.06
CAPN1-221ENST00000531068 ITPK1Q13572 414 aa14.69□□□□□ -0.06
CAPN1-221ENST00000531068 RC3H1Q5TC82 1133 aaKnown RBP14.69□□□□□ -0.06
CAPN1-221ENST00000531068 SLC52A2Q9HAB3 445 aa14.69□□□□□ -0.06
CAPN1-221ENST00000531068 LGR6Q9HBX8 967 aa14.69□□□□□ -0.06
CAPN1-221ENST00000531068 KDM6AO15550 1401 aaPredicted RBP14.68□□□□□ -0.06
CAPN1-221ENST00000531068 GNPATO15228 680 aa14.68□□□□□ -0.06
CAPN1-221ENST00000531068 PTCD1O75127 700 aaKnown RBP14.68□□□□□ -0.06
CAPN1-221ENST00000531068 RTCBQ9Y3I0 505 aaKnown RBP14.68□□□□□ -0.06
CAPN1-221ENST00000531068 FCHSD2O94868 740 aa14.67□□□□□ -0.06
CAPN1-221ENST00000531068 PHF14O94880 888 aa14.67□□□□□ -0.06
CAPN1-221ENST00000531068 U2AF1L5P0DN76 240 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-221ENST00000531068 U2AF1Q01081 240 aaKnown RBP eCLIP14.67□□□□□ -0.06
CAPN1-221ENST00000531068 TRAPPC3LQ5T215 181 aa14.67□□□□□ -0.06
CAPN1-221ENST00000531068 CASZ1Q86V15 1759 aa14.66□□□□□ -0.06
CAPN1-221ENST00000531068 MAP3K5Q99683 1374 aa14.66□□□□□ -0.06
CAPN1-221ENST00000531068 GNAT3A8MTJ3 354 aa14.66□□□□□ -0.06
CAPN1-221ENST00000531068 SLC4A9Q96Q91 983 aa14.66□□□□□ -0.06
CAPN1-221ENST00000531068 ADRA2BP18089 450 aa14.65□□□□□ -0.06
CAPN1-221ENST00000531068 PRKAR2BP31323 418 aa14.65□□□□□ -0.06
CAPN1-221ENST00000531068 MSL1Q68DK7 614 aa14.65□□□□□ -0.06
CAPN1-221ENST00000531068 KLHL34Q8N239 644 aa14.65□□□□□ -0.06
CAPN1-221ENST00000531068 RPS6KA4O75676 772 aa14.64□□□□□ -0.07
CAPN1-221ENST00000531068 TEFQ10587 303 aa14.64□□□□□ -0.07
CAPN1-221ENST00000531068 RSPH6AQ9H0K4 717 aa14.64□□□□□ -0.07
CAPN1-221ENST00000531068 CNTNAP4Q9C0A0 1308 aa14.64□□□□□ -0.07
CAPN1-221ENST00000531068 NEFMP07197 916 aa14.63□□□□□ -0.07
CAPN1-221ENST00000531068 RALBP1Q15311 655 aa14.63□□□□□ -0.07
CAPN1-221ENST00000531068 AMIGO3Q86WK7 504 aa14.63□□□□□ -0.07
CAPN1-221ENST00000531068 NLGN1Q8N2Q7 840 aa14.63□□□□□ -0.07
CAPN1-221ENST00000531068 PHACTR3Q96KR7 559 aa14.63□□□□□ -0.07
CAPN1-221ENST00000531068 COL3A1P02461 1466 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-221ENST00000531068 LY75O60449 1722 aa14.62□□□□□ -0.07
CAPN1-221ENST00000531068 RFC4P35249 363 aa14.62□□□□□ -0.07
CAPN1-221ENST00000531068 SMIM5Q71RC9 77 aa14.62□□□□□ -0.07
CAPN1-221ENST00000531068 TTC5Q8N0Z6 440 aa14.62□□□□□ -0.07
CAPN1-221ENST00000531068 VSIG10Q8N0Z9 540 aa14.62□□□□□ -0.07
CAPN1-221ENST00000531068 MIER1Q8N108 512 aa14.62□□□□□ -0.07
CAPN1-221ENST00000531068 IL17REQ8NFR9 667 aa14.62□□□□□ -0.07
CAPN1-221ENST00000531068 RTF1Q92541 710 aaKnown RBP14.62□□□□□ -0.07
CAPN1-221ENST00000531068 PNNQ9H307 717 aaKnown RBP14.62□□□□□ -0.07
CAPN1-221ENST00000531068 CD2APQ9Y5K6 639 aa14.62□□□□□ -0.07
CAPN1-221ENST00000531068 CRKLP46109 303 aaKnown RBP14.61□□□□□ -0.07
CAPN1-221ENST00000531068 SLC39A6Q13433 755 aa14.61□□□□□ -0.07
CAPN1-221ENST00000531068 GPR162Q16538 588 aa14.61□□□□□ -0.07
CAPN1-221ENST00000531068 ARHGEF1Q92888 912 aaKnown RBP14.61□□□□□ -0.07
CAPN1-221ENST00000531068 YY1P25490 414 aa14.6□□□□□ -0.07
CAPN1-221ENST00000531068 TOGARAM1Q9Y4F4 1720 aa14.6□□□□□ -0.07
CAPN1-221ENST00000531068 HTATSF1O43719 755 aaKnown RBP14.59□□□□□ -0.07
CAPN1-221ENST00000531068 DNAJC10Q8IXB1 793 aa14.59□□□□□ -0.07
CAPN1-221ENST00000531068 TEX13AQ9BXU3 409 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-221ENST00000531068 STARD3NLO95772 234 aa14.58□□□□□ -0.08
CAPN1-221ENST00000531068 INTS5Q6P9B9 1019 aaKnown RBP14.58□□□□□ -0.08
CAPN1-221ENST00000531068 ZNF790Q6PG37 636 aa14.58□□□□□ -0.08
CAPN1-221ENST00000531068 CCDC87Q9NVE4 849 aa14.58□□□□□ -0.08
CAPN1-221ENST00000531068 MMP10P09238 476 aa14.57□□□□□ -0.08
CAPN1-221ENST00000531068 CYP19A1P11511 503 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-221ENST00000531068 C4BP0C0L5 1744 aa14.57□□□□□ -0.08
CAPN1-221ENST00000531068 BTBD11A6QL63 1104 aa14.56□□□□□ -0.08
CAPN1-221ENST00000531068 GRIN3BO60391 1043 aa14.56□□□□□ -0.08
CAPN1-221ENST00000531068 PELP1Q8IZL8 1130 aaKnown RBP14.56□□□□□ -0.08
CAPN1-221ENST00000531068 NLGN2Q8NFZ4 835 aa14.56□□□□□ -0.08
CAPN1-221ENST00000531068 ITGB4P16144 1822 aa14.55□□□□□ -0.08
CAPN1-221ENST00000531068 ZPR1O75312 459 aa14.55□□□□□ -0.08
CAPN1-221ENST00000531068 GYS1P13807 737 aa14.55□□□□□ -0.08
CAPN1-221ENST00000531068 FMNL2Q96PY5 1086 aa14.55□□□□□ -0.08
CAPN1-221ENST00000531068 CEMIPQ8WUJ3 1361 aa14.55□□□□□ -0.08
CAPN1-221ENST00000531068 CENPBP07199 599 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-221ENST00000531068 ZNF496Q96IT1 587 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-221ENST00000531068 PARP3Q9Y6F1 533 aa14.54□□□□□ -0.08
CAPN1-221ENST00000531068 C5P01031 1676 aa14.54□□□□□ -0.08
CAPN1-221ENST00000531068 QSER1Q2KHR3 1735 aa14.54□□□□□ -0.08
CAPN1-221ENST00000531068 MRC1P22897 1456 aa14.53□□□□□ -0.08
CAPN1-221ENST00000531068 TAF7Q15545 349 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-221ENST00000531068 MCM10Q7L590 875 aa14.53□□□□□ -0.08
CAPN1-221ENST00000531068 SOS1Q07889 1333 aaPredicted RBP14.52□□□□□ -0.08
CAPN1-221ENST00000531068 MYBBP1AQ9BQG0 1328 aaKnown RBP14.52□□□□□ -0.08
CAPN1-221ENST00000531068 USP42Q9H9J4 1324 aaKnown RBP14.52□□□□□ -0.08
CAPN1-221ENST00000531068 MAPK8IP3Q9UPT6 1336 aa14.52□□□□□ -0.08
CAPN1-221ENST00000531068 A0A087WZG4 1122 aa14.52□□□□□ -0.09
CAPN1-221ENST00000531068 TGFB2P61812 414 aa14.52□□□□□ -0.09
CAPN1-221ENST00000531068 NPM2Q86SE8 214 aaKnown RBP14.52□□□□□ -0.09
CAPN1-221ENST00000531068 PLEKHF1Q96S99 279 aa14.52□□□□□ -0.09
CAPN1-221ENST00000531068 HEG1Q9ULI3 1381 aa14.51□□□□□ -0.09
CAPN1-221ENST00000531068 CANXP27824 592 aaKnown RBP14.51□□□□□ -0.09
CAPN1-221ENST00000531068 NFE2L2Q16236 605 aa14.51□□□□□ -0.09
CAPN1-221ENST00000531068 PNISRQ8TF01 805 aaKnown RBP14.51□□□□□ -0.09
CAPN1-221ENST00000531068 SRP68Q9UHB9 627 aaKnown RBP14.51□□□□□ -0.09
CAPN1-221ENST00000531068 NARFQ9UHQ1 456 aa14.51□□□□□ -0.09
CAPN1-221ENST00000531068 ZBTB1Q9Y2K1 713 aa14.51□□□□□ -0.09
CAPN1-221ENST00000531068 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
CAPN1-221ENST00000531068 FKBP8Q14318 412 aa14.5□□□□□ -0.09
CAPN1-221ENST00000531068 USPL1Q5W0Q7 1092 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms